Uses of Class
ubic.gemma.model.expression.bioAssayData.ExperimentExpressionLevelsValueObject
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Packages that use ExperimentExpressionLevelsValueObject Package Description ubic.gemma.persistence.service.expression.bioAssayData ubic.gemma.rest -
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Uses of ExperimentExpressionLevelsValueObject in ubic.gemma.persistence.service.expression.bioAssayData
Methods in ubic.gemma.persistence.service.expression.bioAssayData that return types with arguments of type ExperimentExpressionLevelsValueObject Modifier and Type Method Description List<ExperimentExpressionLevelsValueObject>
ProcessedExpressionDataVectorService. getExpressionLevels(Collection<ExpressionExperiment> ees, Collection<Gene> genes, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>
ProcessedExpressionDataVectorServiceImpl. getExpressionLevels(Collection<ExpressionExperiment> ees, Collection<Gene> genes, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>
ProcessedExpressionDataVectorService. getExpressionLevelsDiffEx(Collection<ExpressionExperiment> ees, Long diffExResultSetId, double threshold, int max, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>
ProcessedExpressionDataVectorServiceImpl. getExpressionLevelsDiffEx(Collection<ExpressionExperiment> ees, Long diffExResultSetId, double threshold, int max, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>
ProcessedExpressionDataVectorService. getExpressionLevelsPca(Collection<ExpressionExperiment> ees, int threshold, int component, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>
ProcessedExpressionDataVectorServiceImpl. getExpressionLevelsPca(Collection<ExpressionExperiment> ees, int limit, int component, boolean keepGeneNonSpecific, String consolidateMode)
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Uses of ExperimentExpressionLevelsValueObject in ubic.gemma.rest
Methods in ubic.gemma.rest that return types with arguments of type ExperimentExpressionLevelsValueObject Modifier and Type Method Description ResponseDataObject<List<ExperimentExpressionLevelsValueObject>>
DatasetsWebService. getDatasetDifferentialExpression(DatasetArrayArg datasets, Long diffExSet, Double threshold, LimitArg limit, Boolean keepNonSpecific, ExpLevelConsolidationArg consolidate)
Retrieves the expression levels of genes highly expressed in the given component on given datasets.ResponseDataObject<List<ExperimentExpressionLevelsValueObject>>
DatasetsWebService. getDatasetExpressionForGenes(DatasetArrayArg datasets, GeneArrayArg genes, Boolean keepNonSpecific, ExpLevelConsolidationArg consolidate)
Retrieves the expression levels of given genes on given datasets.ResponseDataObject<List<ExperimentExpressionLevelsValueObject>>
DatasetsWebService. getDatasetExpressionPca(DatasetArrayArg datasets, Integer component, LimitArg limit, Boolean keepNonSpecific, ExpLevelConsolidationArg consolidate)
Retrieves the expression levels of genes highly expressed in the given component on given datasets.
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