Uses of Enum Class
ubic.gemma.model.expression.experiment.AgentCurationKind

Packages that use AgentCurationKind

Package	Description
ubic.gemma.model.common.auditAndSecurity.curation
ubic.gemma.model.expression.experiment
ubic.gemma.persistence.service.common.auditAndSecurity.curation

Uses of AgentCurationKind in ubic.gemma.model.common.auditAndSecurity.curation

Methods in ubic.gemma.model.common.auditAndSecurity.curation that return AgentCurationKind

Modifier and Type	Method	Description
AgentCurationKind	AnnotationSet.getKind()
AgentCurationKind	AnnotationSetSummaryValueObject.getKind()

Methods in ubic.gemma.model.common.auditAndSecurity.curation with parameters of type AgentCurationKind

Modifier and Type	Method	Description
void	AnnotationSet.setKind(AgentCurationKind kind)
void	AnnotationSetSummaryValueObject.setKind(AgentCurationKind kind)

Constructors in ubic.gemma.model.common.auditAndSecurity.curation with parameters of type AgentCurationKind

Modifier	Constructor	Description
	AnnotationSetSummaryValueObject(Long id, AnnotationSetRole role, AnnotationSetSource source, AgentCurationKind kind, String runId, String createdBy, Date createdAt, Date updatedAt, Date finalizedAt, String finalizedBy, String agentVersion, String model, String runSha, String agentName, Date ranAt, Long investigationId, Long parentId, Long payloadSize, String status, Integer factorCount, Integer tagCount, String datasetShortName)	Projection constructor used by the HQL SELECT NEW ... query in AnnotationSetDaoImpl.

Uses of AgentCurationKind in ubic.gemma.model.expression.experiment

Subclasses with type arguments of type AgentCurationKind in ubic.gemma.model.expression.experiment

Modifier and Type	Class	Description
enum	AgentCurationKind	Discriminator on AgentProposal rows: which kind of agent activity a row records — a forward-looking proposal (pre-curation suggestion), an audit (a post-hoc review of an existing dataset, reporting findings to act on), or an evaluation (a scored assessment of curation that already exists).

Methods in ubic.gemma.model.expression.experiment that return AgentCurationKind

Modifier and Type	Method	Description
static AgentCurationKind	AgentCurationKind.fromDbValue(String v)	Parse the lowercase external form back into the enum.
static AgentCurationKind	AgentCurationKind.valueOf(String name)	Returns the enum constant of this class with the specified name.
static AgentCurationKind[]	AgentCurationKind.values()	Returns an array containing the constants of this enum class, in the order they are declared.

Uses of AgentCurationKind in ubic.gemma.persistence.service.common.auditAndSecurity.curation

Methods in ubic.gemma.persistence.service.common.auditAndSecurity.curation with parameters of type AgentCurationKind

Modifier and Type	Method	Description
AnnotationSetService.AttachedAnnotationSet	AnnotationSetService.attach(Investigation investigation, AnnotationSetRole role, AnnotationSetSource source, AgentCurationKind kind, String runId, String createdBy, String agentVersion, String model, Date ranAt, String payloadJson, AnnotationSet parent)	Attach (or return existing) an annotation set to the given investigation.
AnnotationSetService.AttachedAnnotationSet	AnnotationSetService.attach(Investigation investigation, AnnotationSetRole role, AnnotationSetSource source, AgentCurationKind kind, String runId, String createdBy, AnnotationSetService.RunProvenance runProvenance, String payloadJson, AnnotationSet parent)	As AnnotationSetService.attach(Investigation, AnnotationSetRole, AnnotationSetSource, AgentCurationKind, String, String, String, String, Date, String, AnnotationSet), but carrying the full run provenance rather than the agentVersion / model / ranAt triple.
AnnotationSetService.AttachedAnnotationSet	AnnotationSetServiceImpl.attach(Investigation investigation, AnnotationSetRole role, AnnotationSetSource source, AgentCurationKind kind, String runId, String createdBy, String agentVersion, String model, Date ranAt, String payloadJson, AnnotationSet parent)
AnnotationSetService.AttachedAnnotationSet	AnnotationSetServiceImpl.attach(Investigation investigation, AnnotationSetRole role, AnnotationSetSource source, AgentCurationKind kind, String runId, String createdBy, AnnotationSetService.RunProvenance runProvenance, String payloadJson, AnnotationSet parent)
long	AnnotationSetDao.countSummaries(AnnotationSetRole roleFilter, AnnotationSetSource sourceFilter, String createdByFilter, AgentCurationKind kindFilter, String statusFilter, List<Long> investigationIds)	Cross-experiment count.
long	AnnotationSetDaoImpl.countSummaries(AnnotationSetRole roleFilter, AnnotationSetSource sourceFilter, String createdByFilter, AgentCurationKind kindFilter, String statusFilter, List<Long> investigationIds)
long	AnnotationSetService.countSummaries(AnnotationSetRole roleFilter, AnnotationSetSource sourceFilter, String createdByFilter, AgentCurationKind kindFilter, String statusFilter, List<Long> investigationIds)
long	AnnotationSetServiceImpl.countSummaries(AnnotationSetRole roleFilter, AnnotationSetSource sourceFilter, String createdByFilter, AgentCurationKind kindFilter, String statusFilter, List<Long> investigationIds)
List<AnnotationSetSummaryValueObject>	AnnotationSetDao.listSummaries(AnnotationSetRole roleFilter, AnnotationSetSource sourceFilter, String createdByFilter, AgentCurationKind kindFilter, String statusFilter, List<Long> investigationIds, int offset, int limit, AnnotationSetDao.SummarySort sort, boolean descending)	Cross-experiment thin metadata projection: every AnnotationSet matching the supplied filter, sliced by offset / limit.
List<AnnotationSetSummaryValueObject>	AnnotationSetDaoImpl.listSummaries(AnnotationSetRole roleFilter, AnnotationSetSource sourceFilter, String createdByFilter, AgentCurationKind kindFilter, String statusFilter, List<Long> investigationIds, int offset, int limit, AnnotationSetDao.SummarySort sort, boolean descending)
List<AnnotationSetSummaryValueObject>	AnnotationSetService.listSummaries(AnnotationSetRole roleFilter, AnnotationSetSource sourceFilter, String createdByFilter, AgentCurationKind kindFilter, String statusFilter, List<Long> investigationIds, int offset, int limit, AnnotationSetDao.SummarySort sort, boolean descending)
List<AnnotationSetSummaryValueObject>	AnnotationSetServiceImpl.listSummaries(AnnotationSetRole roleFilter, AnnotationSetSource sourceFilter, String createdByFilter, AgentCurationKind kindFilter, String statusFilter, List<Long> investigationIds, int offset, int limit, AnnotationSetDao.SummarySort sort, boolean descending)