Package ubic.gemma.persistence.service.expression.bioAssayData

Interface BioAssayDimensionService

All Superinterfaces:

BaseImmutableService<BioAssayDimension>, BaseReadOnlyService<BioAssayDimension>, BaseVoEnabledService<BioAssayDimension,BioAssayDimensionValueObject>

All Known Implementing Classes:

BioAssayDimensionServiceImpl

public interface BioAssayDimensionService
extends BaseImmutableService<BioAssayDimension>, BaseVoEnabledService<BioAssayDimension,BioAssayDimensionValueObject>

Author:

Paul

Method Summary

Modifier and Type	Method	Description
BioAssayDimension	create(BioAssayDimension bioAssayDimension)
Collection<BioAssayDimension>	findByBioAssaysContainingAll(Collection<BioAssay> bioAssays)
BioAssayDimension	findOrCreate(BioAssayDimension bioAssayDimension)
void	remove(BioAssayDimension bioAssayDimension)
BioAssayDimension	thaw(BioAssayDimension bioAssayDimension)	Fully thaw a dimension.
BioAssayDimension	thawLite(BioAssayDimension bioAssayDimension)	Lightly thaw a dimension.

Methods inherited from interface ubic.gemma.persistence.service.BaseImmutableService

create, remove

Methods inherited from interface ubic.gemma.persistence.service.BaseReadOnlyService

countAll, find, findOrFail, getElementClass, load, load, loadAll, loadOrFail, loadOrFail, loadOrFail, loadOrFail, loadOrFail, loadOrFail, streamAll, streamAll

Methods inherited from interface ubic.gemma.persistence.service.BaseVoEnabledService

loadAllValueObjects, loadValueObject, loadValueObjectById, loadValueObjects, loadValueObjectsByIds

Method Details

findOrCreate

@Secured("IS_AUTHENTICATED_ANONYMOUSLY")
BioAssayDimension findOrCreate(BioAssayDimension bioAssayDimension)

Specified by:

findOrCreate in interface BaseImmutableService<BioAssayDimension>

See Also:

• BaseDao.findOrCreate(Identifiable)

create

@Secured("IS_AUTHENTICATED_ANONYMOUSLY")
BioAssayDimension create(BioAssayDimension bioAssayDimension)

Specified by:

create in interface BaseImmutableService<BioAssayDimension>

See Also:

• BaseDao.create(Identifiable)

findByBioAssaysContainingAll

@Secured("IS_AUTHENTICATED_ANONYMOUSLY")
Collection<BioAssayDimension> findByBioAssaysContainingAll(Collection<BioAssay> bioAssays)

remove

@Secured("GROUP_USER")
void remove(BioAssayDimension bioAssayDimension)

Specified by:

remove in interface BaseImmutableService<BioAssayDimension>

See Also:

• BaseDao.remove(Identifiable)

thawLite

BioAssayDimension thawLite(BioAssayDimension bioAssayDimension)

Lightly thaw a dimension.

Only the collection of bioassays is thawed.

thaw

BioAssayDimension thaw(BioAssayDimension bioAssayDimension)

Fully thaw a dimension.

Each assay is thawed with Thaws.thawBioAssay(ubic.gemma.model.expression.bioAssay.BioAssay).