Package ubic.gemma.persistence.service.expression.bioAssayData

Class BioAssayDimensionServiceImpl

java.lang.Object

ubic.gemma.persistence.service.AbstractService<BioAssayDimension>

ubic.gemma.persistence.service.AbstractVoEnabledService<BioAssayDimension,BioAssayDimensionValueObject>

ubic.gemma.persistence.service.expression.bioAssayData.BioAssayDimensionServiceImpl

All Implemented Interfaces:

BaseImmutableService<BioAssayDimension>, BaseReadOnlyService<BioAssayDimension>, BaseService<BioAssayDimension>, BaseVoEnabledService<BioAssayDimension,BioAssayDimensionValueObject>, BioAssayDimensionService

@Service
public class BioAssayDimensionServiceImpl
extends AbstractVoEnabledService<BioAssayDimension,BioAssayDimensionValueObject>
implements BioAssayDimensionService

Spring Service base class for BioAssayDimensionService, provides access to all services and entities referenced by this service.

See Also:

• BioAssayDimensionService

Field Summary

Fields inherited from class ubic.gemma.persistence.service.AbstractService

log

Constructor Summary

Constructors

Constructor	Description
BioAssayDimensionServiceImpl(BioAssayDimensionDao bioAssayDimensionDao)

Method Summary

Modifier and Type	Method	Description
Collection<BioAssayDimension>	findByBioAssaysContainingAll(Collection<BioAssay> bioAssays)
BioAssayDimension	thaw(BioAssayDimension bioAssayDimension)	Fully thaw a dimension.
BioAssayDimension	thawLite(BioAssayDimension bioAssayDimension)	Lightly thaw a dimension.

Methods inherited from class ubic.gemma.persistence.service.AbstractVoEnabledService

loadAllValueObjects, loadValueObject, loadValueObjectById, loadValueObjects, loadValueObjectsByIds

Methods inherited from class ubic.gemma.persistence.service.AbstractService

countAll, create, create, ensureInSession, ensureInSession, find, findOrCreate, findOrFail, getElementClass, load, load, loadAll, loadOrFail, loadOrFail, loadOrFail, loadOrFail, loadOrFail, loadOrFail, remove, remove, remove, save, save, streamAll, streamAll, update, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ubic.gemma.persistence.service.BaseImmutableService

create, remove, remove

Methods inherited from interface ubic.gemma.persistence.service.BaseReadOnlyService

countAll, find, findOrFail, getElementClass, load, load, loadAll, loadOrFail, loadOrFail, loadOrFail, loadOrFail, loadOrFail, loadOrFail, streamAll, streamAll

Methods inherited from interface ubic.gemma.persistence.service.BaseVoEnabledService

loadAllValueObjects, loadValueObject, loadValueObjectById, loadValueObjects, loadValueObjectsByIds

Methods inherited from interface ubic.gemma.persistence.service.expression.bioAssayData.BioAssayDimensionService

create, findOrCreate, remove

Constructor Details

BioAssayDimensionServiceImpl

@Autowired
public BioAssayDimensionServiceImpl(BioAssayDimensionDao bioAssayDimensionDao)

Method Details

findByBioAssaysContainingAll

@Transactional(readOnly=true)
public Collection<BioAssayDimension> findByBioAssaysContainingAll(Collection<BioAssay> bioAssays)

Specified by:

findByBioAssaysContainingAll in interface BioAssayDimensionService

thawLite

@Transactional(readOnly=true)
public BioAssayDimension thawLite(BioAssayDimension bioAssayDimension)

Description copied from interface: BioAssayDimensionService

Lightly thaw a dimension.

Only the collection of bioassays is thawed.

Specified by:

thawLite in interface BioAssayDimensionService

thaw

@Transactional(readOnly=true)
public BioAssayDimension thaw(BioAssayDimension bioAssayDimension)

Description copied from interface: BioAssayDimensionService

Fully thaw a dimension.

Each assay is thawed with Thaws.thawBioAssay(ubic.gemma.model.expression.bioAssay.BioAssay).

Specified by:

thaw in interface BioAssayDimensionService