Package ubic.gemma.persistence.service.genome.sequenceAnalysis

Interface BlatAssociationService

All Superinterfaces:

BaseImmutableService<BlatAssociation>, BaseReadOnlyService<BlatAssociation>

All Known Implementing Classes:

BlatAssociationServiceImpl

public interface BlatAssociationService
extends BaseImmutableService<BlatAssociation>

Author:

kelsey

Method Summary

Modifier and Type	Method	Description
BlatAssociation	create(BlatAssociation blatAssociation)	Creates the given entity in the persistent storage.
Collection<BlatAssociation>	find(BioSequence bioSequence)
Collection<BlatAssociation>	find(Gene gene)
Collection<BlatAssociation>	findAndThaw(BioSequence bioSequence)
void	remove(BlatAssociation blatAssociation)	Removes the given entity from the persistent storage.

Methods inherited from interface ubic.gemma.persistence.service.BaseImmutableService

create, findOrCreate, remove, remove

Methods inherited from interface ubic.gemma.persistence.service.BaseReadOnlyService

countAll, find, findOrFail, getElementClass, load, load, loadAll, loadOrFail, loadOrFail, loadOrFail, loadOrFail, streamAll, streamAll

Method Details

create

@Secured("GROUP_USER")
BlatAssociation create(BlatAssociation blatAssociation)

Description copied from interface: BaseImmutableService

Creates the given entity in the persistent storage.

Specified by:

create in interface BaseImmutableService<BlatAssociation>

Parameters:

blatAssociation - the entity to be created.

Returns:

object referencing the persistent instance of the given entity.

remove

@Secured("GROUP_ADMIN")
void remove(BlatAssociation blatAssociation)

Description copied from interface: BaseImmutableService

Removes the given entity from the persistent storage.

Specified by:

remove in interface BaseImmutableService<BlatAssociation>

Parameters:

blatAssociation - the entity to be removed.

find

Collection<BlatAssociation> find(BioSequence bioSequence)

find

Collection<BlatAssociation> find(Gene gene)

findAndThaw

Collection<BlatAssociation> findAndThaw(BioSequence bioSequence)