Package ubic.gemma.web.controller.expression.experiment

Class ExpressionExperimentEditValueObject

java.lang.Object

ubic.gemma.model.common.IdentifiableValueObject<ExpressionExperiment>

ubic.gemma.model.common.auditAndSecurity.curation.AbstractCuratableValueObject<ExpressionExperiment>

ubic.gemma.model.expression.experiment.ExpressionExperimentValueObject

ubic.gemma.model.expression.experiment.ExpressionExperimentDetailsValueObject

ubic.gemma.web.controller.expression.experiment.ExpressionExperimentEditValueObject

All Implemented Interfaces:

gemma.gsec.model.Securable, gemma.gsec.model.SecureValueObject, Serializable, Describable, Identifiable, BioAssaySetValueObject

public class ExpressionExperimentEditValueObject
extends ExpressionExperimentDetailsValueObject

Author:

paul

See Also:

• Serialized Form

Field Summary

Fields inherited from class ubic.gemma.model.expression.experiment.ExpressionExperimentValueObject

description, name, numberOfBioAssays

Fields inherited from class ubic.gemma.model.common.IdentifiableValueObject

id

Constructor Summary

Constructors

Constructor	Description
ExpressionExperimentEditValueObject()	Required when using the class as a spring bean.
ExpressionExperimentEditValueObject(ExpressionExperimentValueObject eevo)

Method Summary

Modifier and Type	Method	Description
Collection<BioAssayValueObject>	getBioAssays()
Collection<QuantitationTypeValueObject>	getQuantitationTypes()
void	setBioAssays(Collection<BioAssayValueObject> bioAssays)
void	setQuantitationTypes(Collection<QuantitationTypeValueObject> qts)

Methods inherited from class ubic.gemma.model.expression.experiment.ExpressionExperimentDetailsValueObject

getActuallyTroubled, getArrayDesigns, getBatchFetchEventType, getCellBrowserDatasetName, getCellBrowserUrl, getDateArrayDesignLastUpdated, getDateBatchFetch, getDateCached, getDateDifferentialAnalysis, getDateLinkAnalysis, getDateMissingValueAnalysis, getDatePcaAnalysis, getDateProcessedDataVectorComputation, getDifferentialExpressionAnalyses, getExpressionExperimentSets, getFont, getHasBatchInformation, getHasBothIntensities, getHasCoexpressionAnalysis, getHasDifferentialExpressionAnalysis, getHasEitherIntensity, getHasMultiplePreferredQuantitationTypes, getHasMultipleTechnologyTypes, getIsRNASeq, getIsSingleCell, getLastArrayDesignUpdateDate, getLinkAnalysisEventType, getMissingValueAnalysisEventType, getNumAnnotations, getNumberOfCellIds, getNumberOfCells, getNumPopulatedFactors, getOriginalPlatforms, getOtherParts, getPcaAnalysisEventType, getPlatformTroubled, getPrimaryCitation, getProcessedDataVectorComputationEventType, getPubmedId, getQChtml, getReprocessedFromRawData, getSampleRemovedFlags, getSecondaryAccession, getSecondaryExternalDatabase, getSecondaryExternalUri, getTroubled, getTroubleDetails, getTroubleDetails, isHasCellBrowser, setArrayDesigns, setBatchFetchEventType, setCellBrowserDatasetName, setCellBrowserUrl, setDateArrayDesignLastUpdated, setDateBatchFetch, setDateCached, setDateDifferentialAnalysis, setDateLinkAnalysis, setDateMissingValueAnalysis, setDatePcaAnalysis, setDateProcessedDataVectorComputation, setDifferentialExpressionAnalyses, setExpressionExperimentSets, setFont, setHasBatchInformation, setHasBothIntensities, setHasCellBrowser, setHasCoexpressionAnalysis, setHasDifferentialExpressionAnalysis, setHasEitherIntensity, setHasMultiplePreferredQuantitationTypes, setHasMultipleTechnologyTypes, setIsRNASeq, setIsSingleCell, setLastArrayDesignUpdateDate, setLinkAnalysisEventType, setMissingValueAnalysisEventType, setNumAnnotations, setNumberOfCellIds, setNumberOfCells, setNumPopulatedFactors, setOriginalPlatforms, setOtherParts, setPcaAnalysisEventType, setPrimaryCitation, setProcessedDataVectorComputationEventType, setPubmedId, setQChtml, setReprocessedFromRawData, setSampleRemovedFlags, setSecondaryAccession, setSecondaryExternalDatabase, setSecondaryExternalUri

Methods inherited from class ubic.gemma.model.expression.experiment.ExpressionExperimentValueObject

getAccession, getArrayDesignCount, getBatchConfound, getBatchEffect, getBatchEffectStatistics, getBioAssayCount, getBioMaterialCount, getCharacteristics, getCurrentUserHasWritePermission, getCurrentUserIsOwner, getDescription, getExperimentalDesign, getExternalDatabase, getExternalDatabaseUri, getExternalUri, getGeeq, getIsPublic, getIsShared, getMetadata, getMinPvalue, getName, getNumberOfBioAssays, getProcessedExpressionVectorCount, getSecurableClass, getShortName, getSource, getSuitableForDEA, getTaxon, getTaxonId, getTaxonObject, getTechnologyType, getUserCanWrite, getUserOwned, setAccession, setArrayDesignCount, setBatchConfound, setBatchEffect, setBatchEffectStatistics, setBioMaterialCount, setCharacteristics, setDescription, setExperimentalDesign, setExternalDatabase, setExternalDatabaseUri, setExternalUri, setGeeq, setIsPublic, setIsShared, setMetadata, setMinPvalue, setName, setNumberOfBioAssays, setProcessedExpressionVectorCount, setShortName, setSource, setSuitableForDEA, setTaxonObject, setTechnologyType, setUserCanWrite, setUserOwned, toString

Methods inherited from class ubic.gemma.model.common.auditAndSecurity.curation.AbstractCuratableValueObject

getCurationNote, getLastNeedsAttentionEvent, getLastNoteUpdateEvent, getLastTroubledEvent, getLastUpdated, getNeedsAttention, setCurationNote, setLastNeedsAttentionEvent, setLastNoteUpdateEvent, setLastTroubledEvent, setLastUpdated, setNeedsAttention, setTroubled

Methods inherited from class ubic.gemma.model.common.IdentifiableValueObject

canEqual, equals, getId, hashCode, setId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface ubic.gemma.model.common.Identifiable

getId

Methods inherited from interface gemma.gsec.model.Securable

getId

Constructor Details

ExpressionExperimentEditValueObject

public ExpressionExperimentEditValueObject()

Required when using the class as a spring bean.

ExpressionExperimentEditValueObject

public ExpressionExperimentEditValueObject(ExpressionExperimentValueObject eevo)

Method Details

getQuantitationTypes

public Collection<QuantitationTypeValueObject> getQuantitationTypes()

setQuantitationTypes

public void setQuantitationTypes(Collection<QuantitationTypeValueObject> qts)

getBioAssays

public Collection<BioAssayValueObject> getBioAssays()

setBioAssays

public void setBioAssays(Collection<BioAssayValueObject> bioAssays)