Package ubic.gemma.model.common.quantitationtype

Class QuantitationTypeValueObject

java.lang.Object

ubic.gemma.model.common.IdentifiableValueObject<QuantitationType>

ubic.gemma.model.common.quantitationtype.QuantitationTypeValueObject

All Implemented Interfaces:

Serializable, Identifiable

public class QuantitationTypeValueObject
extends IdentifiableValueObject<QuantitationType>

Value object for the QuantitationType.

If expressionExperimentId is set, then this QT is EE-associated, and can be distinguished from other QTs with the same ID used in different experiments as per Object.equals(Object) and Object.hashCode(). In this case, the vectorType is also known, but could be null.

Author:

thea

See Also:

Serialized Form

Field Summary

Fields inherited from class ubic.gemma.model.common.IdentifiableValueObject

id

Constructor Summary

Constructors

Constructor	Description
QuantitationTypeValueObject()
QuantitationTypeValueObject(QuantitationType qt)
QuantitationTypeValueObject(QuantitationType qt, ExpressionExperiment expressionExperiment, Class<? extends DesignElementDataVector> vectorType)	Create a QuantitationType VO in the context of an associated experiment.

Method Summary

Methods inherited from class ubic.gemma.model.common.IdentifiableValueObject

getId, setId, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

QuantitationTypeValueObject

public QuantitationTypeValueObject()

QuantitationTypeValueObject

public QuantitationTypeValueObject(QuantitationType qt)

QuantitationTypeValueObject

public QuantitationTypeValueObject(QuantitationType qt,
                                   ExpressionExperiment expressionExperiment,
                                   @Nullable
                                   Class<? extends DesignElementDataVector> vectorType)

Create a QuantitationType VO in the context of an associated experiment.

Note that an associated EE does not imply that the QT is used in processed/raw vectors. There are generic QTs to represent data transformation such as masking that require no storage of vectors.

Parameters:

expressionExperiment - associated experiment

vectorType - vector type if applicable, otherwise null