Package ubic.basecode.ontology.providers
Class MedicOntologyService
- java.lang.Object
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- ubic.basecode.ontology.providers.AbstractDelegatingOntologyService
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- ubic.basecode.ontology.providers.MedicOntologyService
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- All Implemented Interfaces:
AutoCloseable
,OntologyService
@Deprecated public class MedicOntologyService extends AbstractDelegatingOntologyService
Deprecated.MEDIC ONTOLOGY USED BY PHENOCARTA, its represents MESH terms as a tree so with can use the parent structure that a normal mesh term doesnt haveMEDIC comes from the CTD folks. See .... Unfortunately I do not know where our medic.owl file came from (PP)
- Author:
- Nicolas
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Nested Class Summary
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Nested classes/interfaces inherited from interface ubic.basecode.ontology.providers.OntologyService
OntologyService.InferenceMode, OntologyService.LanguageLevel
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Constructor Summary
Constructors Constructor Description MedicOntologyService()
Deprecated.
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Method Summary
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Methods inherited from class ubic.basecode.ontology.providers.AbstractDelegatingOntologyService
cancelInitializationThread, close, findIndividuals, findResources, findTerm, findUsingAlternativeId, getAdditionalPropertyUris, getAllURIs, getChildren, getDescription, getExcludedWordsFromStemming, getInferenceMode, getLanguageLevel, getName, getParents, getProcessImports, getResource, getTerm, getTermIndividuals, index, initialize, initialize, isEnabled, isInitializationThreadAlive, isInitializationThreadCancelled, isOntologyLoaded, isSearchEnabled, loadTermsInNameSpace, setAdditionalPropertyUris, setExcludedWordsFromStemming, setInferenceMode, setLanguageLevel, setProcessImports, setSearchEnabled, startInitializationThread, toString, waitForInitializationThread
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
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Methods inherited from interface ubic.basecode.ontology.providers.OntologyService
findIndividuals, findResources, findTerm, getChildren, getParents
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