Uses of Class
ubic.gemma.core.util.test.BaseTest

Packages that use BaseTest

Package	Description
ubic.gemma.apps
ubic.gemma.cli.metrics
ubic.gemma.cli.util
ubic.gemma.cli.util.test
ubic.gemma.core.analysis.expression.coexpression.links
ubic.gemma.core.analysis.expression.diff
ubic.gemma.core.analysis.preprocess
ubic.gemma.core.analysis.preprocess.batcheffects
ubic.gemma.core.analysis.preprocess.svd
ubic.gemma.core.analysis.report
ubic.gemma.core.analysis.service
ubic.gemma.core.analysis.singleCell.aggregate
ubic.gemma.core.config
ubic.gemma.core.context
ubic.gemma.core.datastructure.matrix.io
ubic.gemma.core.job
ubic.gemma.core.loader.association
ubic.gemma.core.loader.expression
ubic.gemma.core.loader.expression.arrayDesign
ubic.gemma.core.loader.expression.cellxgene
ubic.gemma.core.loader.expression.geo
ubic.gemma.core.loader.expression.geo.service
ubic.gemma.core.loader.expression.geo.singleCell
ubic.gemma.core.loader.expression.simple
ubic.gemma.core.loader.expression.singleCell
ubic.gemma.core.loader.expression.singleCell.transform
ubic.gemma.core.loader.genome.gene
ubic.gemma.core.loader.genome.gene.ncbi
ubic.gemma.core.loader.genome.gene.ncbi.homology
ubic.gemma.core.loader.genome.taxon
ubic.gemma.core.logging.log4j
ubic.gemma.core.mail
ubic.gemma.core.metrics
ubic.gemma.core.ontology
ubic.gemma.core.ontology.providers
ubic.gemma.core.scheduler
ubic.gemma.core.search
ubic.gemma.core.search.source
ubic.gemma.core.security
ubic.gemma.core.security.audit
ubic.gemma.core.security.authentication
ubic.gemma.core.security.authorization
ubic.gemma.core.security.authorization.acl
ubic.gemma.core.security.concurrent
ubic.gemma.core.security.principal
ubic.gemma.core.util
ubic.gemma.core.util.test
ubic.gemma.core.visualization
ubic.gemma.core.visualization.cellbrowser
ubic.gemma.model.genome
ubic.gemma.persistence.persister
ubic.gemma.persistence.retry
ubic.gemma.persistence.service
ubic.gemma.persistence.service.analysis.expression.diff
ubic.gemma.persistence.service.association.coexpression
ubic.gemma.persistence.service.blacklist
ubic.gemma.persistence.service.common.auditAndSecurity
ubic.gemma.persistence.service.common.auditAndSecurity.curation
ubic.gemma.persistence.service.common.description
ubic.gemma.persistence.service.expression.arrayDesign
ubic.gemma.persistence.service.expression.bioAssay
ubic.gemma.persistence.service.expression.bioAssayData
ubic.gemma.persistence.service.expression.biomaterial
ubic.gemma.persistence.service.expression.designElement
ubic.gemma.persistence.service.expression.experiment
ubic.gemma.persistence.service.genome
ubic.gemma.persistence.service.genome.gene
ubic.gemma.persistence.service.genome.sequenceAnalysis
ubic.gemma.persistence.service.maintenance
ubic.gemma.persistence.util
ubic.gemma.rest
ubic.gemma.rest.serializers
ubic.gemma.rest.servlet
ubic.gemma.rest.util.args
ubic.gemma.web.controller
ubic.gemma.web.controller.common
ubic.gemma.web.controller.common.auditAndSecurity
ubic.gemma.web.controller.common.description.bibref
ubic.gemma.web.controller.common.rss
ubic.gemma.web.controller.diff
ubic.gemma.web.controller.expression.arrayDesign
ubic.gemma.web.controller.expression.experiment
ubic.gemma.web.controller.job
ubic.gemma.web.controller.ontology
ubic.gemma.web.controller.search
ubic.gemma.web.controller.security
ubic.gemma.web.util

Uses of BaseTest in ubic.gemma.apps

Subclasses of BaseTest in ubic.gemma.apps

Modifier and Type	Class	Description
class	ArrayDesignMergeCliTest
class	DifferentialExpressionAnalysisCliTest
class	ExpressionExperimentManipulatingCLITest
class	ExternalDatabaseUpdaterCliTest
class	FactorValueMigratorCLITest	Deprecated.
class	FactorValueMigratorServiceTest	Deprecated.
class	FindObsoleteTermsCliTest
class	GeoSingleCellDataDownloaderCliTest
class	LoadSimpleExpressionDataCliTest
class	NCBIGene2GOAssociationLoaderCLITest
class	ProtocolAdderCliTest
class	ProtocolDeleterCliTest
class	PubMedSearcherIntegrationTest	Tests command line.
class	RNASeqDataAddCliTest

Uses of BaseTest in ubic.gemma.cli.metrics

Subclasses of BaseTest in ubic.gemma.cli.metrics

Modifier and Type	Class	Description
class	MeterRegistryCliConfigurerTest

Uses of BaseTest in ubic.gemma.cli.util

Subclasses of BaseTest in ubic.gemma.cli.util

Modifier and Type	Class	Description
class	MarkCLIsAsPrototypesTest	Test various behaviours of CLIs when injected as bean.

Uses of BaseTest in ubic.gemma.cli.util.test

Subclasses of BaseTest in ubic.gemma.cli.util.test

Modifier and Type	Class	Description
class	BaseCliIntegrationTest	Base class for CLI integration tests.
class	BaseCliTest	Base class for CLI tests.

Uses of BaseTest in ubic.gemma.core.analysis.expression.coexpression.links

Subclasses of BaseTest in ubic.gemma.core.analysis.expression.coexpression.links

Modifier and Type	Class	Description
class	LinkAnalysisServiceTest

Uses of BaseTest in ubic.gemma.core.analysis.expression.diff

Subclasses of BaseTest in ubic.gemma.core.analysis.expression.diff

Modifier and Type	Class	Description
class	AncovaTest	Tests of ANCOVA: using linear models with mixtures of fixed level and continuous parameters.
class	BaseAnalyzerConfigurationTest	Other tests can extend this class if they want an expression experiment with complete block design and biological replicates.
class	BaselineDetectionTest
class	ContinuousVariableDiffExTest
class	DifferentialExpressionAnalysisHelperServiceTest
class	DifferentialExpressionAnalyzerServiceTest
class	DifferentialExpressionAnalyzerTest
class	DiffExMetaAnalyzerServiceTest	This is a test that requires complex setup: loading several data sets, information on genes, array design annotations, conducting differential expression, and finally the meta-analysis.
class	DiffExTest	Tests added to check various cases of differential expression analysis.
class	DiffExWithInvalidInteraction2Test	for bug 3927
class	DiffExWithInvalidInteractionTest
class	LowVarianceDataTest	Test based on GSE19480, see bug 3177
class	OneWayAnovaAnalyzerTest	Tests the one way anova analyzer.
class	SubsettedAnalysis2Test
class	SubsettedAnalysis3Test
class	SubsettedAnalysis4Test	This test covers subset analysis with pre-existing EE subset structure.
class	SubsettedAnalysisTest
class	TTestAnalyzerTest	See test/data/stat-tests/README.txt for R code.
class	TwoWayAnovaWithInteractionsAnalyzerTest	Tests the two way anova analyzer with interactions.
class	TwoWayAnovaWithInteractionsTest2
class	TwoWayAnovaWithInteractionTest2	Test based on GSE8441
class	TwoWayAnovaWithoutInteractionsAnalyzerTest	Tests the two way anova analyzer.

Uses of BaseTest in ubic.gemma.core.analysis.preprocess

Subclasses of BaseTest in ubic.gemma.core.analysis.preprocess

Modifier and Type	Class	Description
class	ExpressionDataSVDTest
class	MeanVarianceServiceTest
class	OutlierDetectionServiceTest	Tests for OutlierDetectionService
class	ProcessedExpressionDataCreateServiceTest
class	SampleCoexpressionAnalysisServiceTest
class	SplitExperimentTest
class	TwoChannelExpressionDataDoubleMatrixTest
class	TwoChannelMissingValuesTest
class	VectorMergingServiceTest	Tests loading, platform switch, vector merge, and complex deletion (in teardown)

Uses of BaseTest in ubic.gemma.core.analysis.preprocess.batcheffects

Subclasses of BaseTest in ubic.gemma.core.analysis.preprocess.batcheffects

Modifier and Type	Class	Description
class	BatchInfoPopulationServiceIntegrationTest	Test fetching and loading the batch information from raw files.
class	ExpressionExperimentBatchCorrectionServiceTest
class	RNASeqBatchInfoPopulationTest

Uses of BaseTest in ubic.gemma.core.analysis.preprocess.svd

Subclasses of BaseTest in ubic.gemma.core.analysis.preprocess.svd

Modifier and Type	Class	Description
class	SVDServiceImplTest

Uses of BaseTest in ubic.gemma.core.analysis.report

Subclasses of BaseTest in ubic.gemma.core.analysis.report

Modifier and Type	Class	Description
class	ArrayDesignReportServiceTest
class	ExpressionExperimentReportServiceTest
class	WhatsNewServiceTest

Uses of BaseTest in ubic.gemma.core.analysis.service

Subclasses of BaseTest in ubic.gemma.core.analysis.service

Modifier and Type	Class	Description
class	CompositeSequenceGeneMapperServiceTest	This test makes use of the ArrayDesignProbeMapperServiceImpl.
class	ExpressionDataFileServiceTest
class	ExpressionMetadataChangelogFileServiceTest
class	GeneMultifunctionalityPopulationServiceTest

Uses of BaseTest in ubic.gemma.core.analysis.singleCell.aggregate

Subclasses of BaseTest in ubic.gemma.core.analysis.singleCell.aggregate

Modifier and Type	Class	Description
class	SingleCellExpressionExperimentAggregateServiceTest
class	SingleCellExpressionExperimentCreateSubSetsAndAggregateServiceTest
class	SingleCellExpressionExperimentSubSetServiceTest

Uses of BaseTest in ubic.gemma.core.config

Subclasses of BaseTest in ubic.gemma.core.config

Modifier and Type	Class	Description
class	SettingsConfigTest

Uses of BaseTest in ubic.gemma.core.context

Subclasses of BaseTest in ubic.gemma.core.context

Modifier and Type	Class	Description
class	AsyncBeanAutowiringTest
class	AsyncFactoryTest
class	AsyncSingletonFactoryTest

Uses of BaseTest in ubic.gemma.core.datastructure.matrix.io

Subclasses of BaseTest in ubic.gemma.core.datastructure.matrix.io

Modifier and Type	Class	Description
class	ExperimentalDesignWriterTest

Uses of BaseTest in ubic.gemma.core.job

Subclasses of BaseTest in ubic.gemma.core.job

Modifier and Type	Class	Description
class	ExecutingTaskTest
class	SchedulerSecurityTest	Tests security of methods run by Quartz.

Uses of BaseTest in ubic.gemma.core.loader.association

Subclasses of BaseTest in ubic.gemma.core.loader.association

Modifier and Type	Class	Description
class	NCBIGene2GOAssociationParserTest	Tests multiple both parsing and loading.

Uses of BaseTest in ubic.gemma.core.loader.expression

Subclasses of BaseTest in ubic.gemma.core.loader.expression

Modifier and Type	Class	Description
class	DataUpdaterTest
class	ExonArrayDataAddIntegrationTest	Uses the Affy Power Tools, and full-sized data sets.
class	ExpressionExperimentPlatformSwitchTest	Switching of platforms that have no composite sequences.

Uses of BaseTest in ubic.gemma.core.loader.expression.arrayDesign

Subclasses of BaseTest in ubic.gemma.core.loader.expression.arrayDesign

Modifier and Type	Class	Description
class	AbstractArrayDesignProcessingTest	Base test for tests that need persistent array design with sequences.
class	ArrayDesignMergeServiceTest
class	ArrayDesignSequenceAlignmentandMappingTest
class	ArrayDesignSequenceProcessorFastacmdTest	Test exercises the fastacmd - requires executable.
class	ArrayDesignSequenceProcessorTest

Uses of BaseTest in ubic.gemma.core.loader.expression.cellxgene

Subclasses of BaseTest in ubic.gemma.core.loader.expression.cellxgene

Modifier and Type	Class	Description
class	CellXGeneAnnDataSingleCellDataLoaderTest
class	CellXGeneConverterTest
class	CellXGeneDataLoaderServiceTest
class	CellXGeneFetcherTest

Uses of BaseTest in ubic.gemma.core.loader.expression.geo

Subclasses of BaseTest in ubic.gemma.core.loader.expression.geo

Modifier and Type	Class	Description
class	AbstractGeoServiceTest
class	GeoConverterTest	Unit test for GeoConversion Added extension BaseSpringContextTest as want Taxon Service to be called
class	GeoSingleCellDetectorTest	TODO: move SOFT files in test resources and mock FTP downloads

Uses of BaseTest in ubic.gemma.core.loader.expression.geo.service

Subclasses of BaseTest in ubic.gemma.core.loader.expression.geo.service

Modifier and Type	Class	Description
class	GeoBrowserServiceParseTest
class	GeoBrowserServiceTest
class	GeoDatasetServiceTest	Test full procedure of loading GEO data, focus on corner cases.
class	GeoPlatformServiceTest	Tests of GeoPlatformService

Uses of BaseTest in ubic.gemma.core.loader.expression.geo.singleCell

Subclasses of BaseTest in ubic.gemma.core.loader.expression.geo.singleCell

Modifier and Type	Class	Description
class	GeoMexSingleCellDataLoaderConfigurerTest

Uses of BaseTest in ubic.gemma.core.loader.expression.simple

Subclasses of BaseTest in ubic.gemma.core.loader.expression.simple

Modifier and Type	Class	Description
class	ExperimentalDesignImportDuplicateValueTest	Test for import that results in multiple factor values for the same factor on a single biomaterial.
class	ExperimentalDesignImporterTest
class	SimpleExpressionDataLoaderServiceTest

Uses of BaseTest in ubic.gemma.core.loader.expression.singleCell

Subclasses of BaseTest in ubic.gemma.core.loader.expression.singleCell

Modifier and Type	Class	Description
class	AnnDataSingleCellDataLoaderIntegrationTest
class	AnnDataSingleCellDataLoaderTest
class	MexSingleCellDataLoaderTest
class	SingleCellDataLoaderServiceIntegrationTest	Complete integration tests for loading single-cell data.
class	SingleCellDataTransformationsTest

Uses of BaseTest in ubic.gemma.core.loader.expression.singleCell.transform

Subclasses of BaseTest in ubic.gemma.core.loader.expression.singleCell.transform

Modifier and Type	Class	Description
class	SingleCell10xMexFilterTest

Uses of BaseTest in ubic.gemma.core.loader.genome.gene

Subclasses of BaseTest in ubic.gemma.core.loader.genome.gene

Modifier and Type	Class	Description
class	ExternalFileGeneLoaderServiceTest	Test that Gemma can load genes from an external gene file with format : #GeneSymbol GeneName Uniprot ZYX ZYXIN Q15942 ZXDC ZXD FAMILY ZINC FINGER C Q8C8V1

Uses of BaseTest in ubic.gemma.core.loader.genome.gene.ncbi

Subclasses of BaseTest in ubic.gemma.core.loader.genome.gene.ncbi

Modifier and Type	Class	Description
class	NCBIGeneLoadingTest

Uses of BaseTest in ubic.gemma.core.loader.genome.gene.ncbi.homology

Subclasses of BaseTest in ubic.gemma.core.loader.genome.gene.ncbi.homology

Modifier and Type	Class	Description
class	HomologeneServiceTest	Tests the homologeneService but only access methods that don't require a DB connection (using the gemma db).

Uses of BaseTest in ubic.gemma.core.loader.genome.taxon

Subclasses of BaseTest in ubic.gemma.core.loader.genome.taxon

Modifier and Type	Class	Description
class	TaxonLoaderTest

Uses of BaseTest in ubic.gemma.core.logging.log4j

Subclasses of BaseTest in ubic.gemma.core.logging.log4j

Modifier and Type	Class	Description
class	BuildInfoThreadContextPopulatorTest
class	TaskExecutorThreadContextInheritPostProcessorTest

Uses of BaseTest in ubic.gemma.core.mail

Subclasses of BaseTest in ubic.gemma.core.mail

Modifier and Type	Class	Description
class	MailEngineImplTest

Uses of BaseTest in ubic.gemma.core.metrics

Subclasses of BaseTest in ubic.gemma.core.metrics

Modifier and Type	Class	Description
class	GenericMeterRegistryConfigurerTest

Uses of BaseTest in ubic.gemma.core.ontology

Subclasses of BaseTest in ubic.gemma.core.ontology

Modifier and Type	Class	Description
class	FactorValueOntologyServiceTest
class	GemmaAndExperimentalFactorOntologyTest	This test covers cases where inference is done across two distinct OntologyService.
class	OntologyServiceTest

Uses of BaseTest in ubic.gemma.core.ontology.providers

Subclasses of BaseTest in ubic.gemma.core.ontology.providers

Modifier and Type	Class	Description
class	GeneOntologyService2Test	Additional tests with updated ontology file, fixing problems getting aspects.
class	GeneOntologyServiceTest

Uses of BaseTest in ubic.gemma.core.scheduler

Subclasses of BaseTest in ubic.gemma.core.scheduler

Modifier and Type	Class	Description
class	BatchInfoRepopulationJobTest

Uses of BaseTest in ubic.gemma.core.search

Subclasses of BaseTest in ubic.gemma.core.search

Modifier and Type	Class	Description
class	SearchServiceIntegrationTest
class	SearchServiceTest
class	SearchServiceVoConversionTest	Test conversion to VOs for search results.

Uses of BaseTest in ubic.gemma.core.search.source

Subclasses of BaseTest in ubic.gemma.core.search.source

Modifier and Type	Class	Description
class	DatabaseSearchSourceTest
class	GeneOntologySearchSourceTest
class	OntologySearchSourceTest

Uses of BaseTest in ubic.gemma.core.security

Subclasses of BaseTest in ubic.gemma.core.security

Modifier and Type	Class	Description
class	SecurityUtilsTest
class	UserGroupServiceTest	Tests the Group facilities of the UserManager..

Uses of BaseTest in ubic.gemma.core.security.audit

Subclasses of BaseTest in ubic.gemma.core.security.audit

Modifier and Type	Class	Description
class	AuditAdviceTest	Test of adding audit events when objects are created, updated or deleted.

Uses of BaseTest in ubic.gemma.core.security.authentication

Subclasses of BaseTest in ubic.gemma.core.security.authentication

Modifier and Type	Class	Description
class	ManualAuthenticationProcessingTest
class	UserServiceImplTest

Uses of BaseTest in ubic.gemma.core.security.authorization

Subclasses of BaseTest in ubic.gemma.core.security.authorization

Modifier and Type	Class	Description
class	SecureValueObjectAuthorizationTest
class	SecurityServiceTest	Tests the SecurityService: making objects public or private and testing the permissions.

Uses of BaseTest in ubic.gemma.core.security.authorization.acl

Subclasses of BaseTest in ubic.gemma.core.security.authorization.acl

Modifier and Type	Class	Description
class	AclAdviceTest	Tests of ACL management: adding and removing from objects during CRUD operations.
class	AclAuthorizationTest
class	AclClassMetadataTest
class	AclCollectionBeforeTest	Test the AclCollectionEntryVoter.

Uses of BaseTest in ubic.gemma.core.security.concurrent

Subclasses of BaseTest in ubic.gemma.core.security.concurrent

Modifier and Type	Class	Description
class	DelegatingSecurityContextTaskExecutorTest

Uses of BaseTest in ubic.gemma.core.security.principal

Subclasses of BaseTest in ubic.gemma.core.security.principal

Modifier and Type	Class	Description
class	PrincipalTest	Test that we can log users in, etc.

Uses of BaseTest in ubic.gemma.core.util

Subclasses of BaseTest in ubic.gemma.core.util

Modifier and Type	Class	Description
class	BuildInfoTest
class	MailServiceTest
class	MissingBuildInfoTest
class	StrictBeanDefinitionValidatorTest

Uses of BaseTest in ubic.gemma.core.util.test

Subclasses of BaseTest in ubic.gemma.core.util.test

Modifier and Type	Class	Description
class	BaseIntegrationTest	Base class for integration tests.
class	BaseSpringContextTest	Deprecated. favour the simpler BaseIntegrationTest for new tests

Uses of BaseTest in ubic.gemma.core.visualization

Subclasses of BaseTest in ubic.gemma.core.visualization

Modifier and Type	Class	Description
class	ExperimentalDesignVisualizationServiceTest

Uses of BaseTest in ubic.gemma.core.visualization.cellbrowser

Subclasses of BaseTest in ubic.gemma.core.visualization.cellbrowser

Modifier and Type	Class	Description
class	CellBrowserServiceImplTest

Uses of BaseTest in ubic.gemma.model.genome

Subclasses of BaseTest in ubic.gemma.model.genome

Modifier and Type	Class	Description
class	GeneSetValueObjectHelperTest

Uses of BaseTest in ubic.gemma.persistence.persister

Subclasses of BaseTest in ubic.gemma.persistence.persister

Modifier and Type	Class	Description
class	GenomePersisterTest
class	PersisterTest

Uses of BaseTest in ubic.gemma.persistence.retry

Subclasses of BaseTest in ubic.gemma.persistence.retry

Modifier and Type	Class	Description
class	RetryTest

Uses of BaseTest in ubic.gemma.persistence.service

Subclasses of BaseTest in ubic.gemma.persistence.service

Modifier and Type	Class	Description
class	AbstractFilteringVoEnabledDaoTest
class	FilteringVoEnabledServiceIntegrationTest	Test all possible filterable properties for filtering and sorting results.

Uses of BaseTest in ubic.gemma.persistence.service.analysis.expression.diff

Subclasses of BaseTest in ubic.gemma.persistence.service.analysis.expression.diff

Modifier and Type	Class	Description
class	DifferentialExpressionAnalysisServiceTest
class	DifferentialExpressionResultServiceTest
class	ExpressionAnalysisResultSetServiceTest	This implementation is using the Hibernate Criteria API, so we want to minimally test the logic of translating Filters and Sort into proper Criteria queries.
class	GeneDiffExMetaAnalysisServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.association.coexpression

Subclasses of BaseTest in ubic.gemma.persistence.service.association.coexpression

Modifier and Type	Class	Description
class	Gene2GeneCoexpressionServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.blacklist

Subclasses of BaseTest in ubic.gemma.persistence.service.blacklist

Modifier and Type	Class	Description
class	BlacklistedEntityServiceTest
class	BlacklistTest

Uses of BaseTest in ubic.gemma.persistence.service.common.auditAndSecurity

Subclasses of BaseTest in ubic.gemma.persistence.service.common.auditAndSecurity

Modifier and Type	Class	Description
class	AuditEventServiceTest
class	AuditTrailDaoTest
class	AuditTrailServiceImplTest

Uses of BaseTest in ubic.gemma.persistence.service.common.auditAndSecurity.curation

Subclasses of BaseTest in ubic.gemma.persistence.service.common.auditAndSecurity.curation

Modifier and Type	Class	Description
class	CuratableValueObjectTest

Uses of BaseTest in ubic.gemma.persistence.service.common.description

Subclasses of BaseTest in ubic.gemma.persistence.service.common.description

Modifier and Type	Class	Description
class	BibliographicReferenceServiceImplTest
class	BibliographicReferenceServiceTest	This class tests the bibliographic reference data access object.
class	CharacteristicServiceTest
class	DatabaseEntryDaoImplTest
class	ExternalDatabaseServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.expression.arrayDesign

Subclasses of BaseTest in ubic.gemma.persistence.service.expression.arrayDesign

Modifier and Type	Class	Description
class	ArrayDesignServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.expression.bioAssay

Subclasses of BaseTest in ubic.gemma.persistence.service.expression.bioAssay

Modifier and Type	Class	Description
class	BioAssayServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.expression.bioAssayData

Subclasses of BaseTest in ubic.gemma.persistence.service.expression.bioAssayData

Modifier and Type	Class	Description
class	ProcessedExpressionDataVectorCreationHelperServiceTest
class	ProcessedExpressionDataVectorServiceTest
class	RawAndProcessedExpressionDataVectorServiceGeoTest
class	RawAndProcessedExpressionDataVectorServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.expression.biomaterial

Subclasses of BaseTest in ubic.gemma.persistence.service.expression.biomaterial

Modifier and Type	Class	Description
class	BioMaterialServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.expression.designElement

Subclasses of BaseTest in ubic.gemma.persistence.service.expression.designElement

Modifier and Type	Class	Description
class	CompositeSequenceServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.expression.experiment

Subclasses of BaseTest in ubic.gemma.persistence.service.expression.experiment

Modifier and Type	Class	Description
class	ExpressionExperimentBatchInformationServiceTest
class	ExpressionExperimentDeleteTest
class	ExpressionExperimentServiceImplTest
class	ExpressionExperimentServiceIntegrationTest
class	ExpressionExperimentServiceTest
class	ExpressionExperimentSetServiceTest	Tests for methods that perform operations on or with expressionExperiment sets
class	ExpressionExperimentSetValueObjectHelperTest	Tests for methods that create ExpressionExperimentSetValueObjects from expressionExperiment entities
class	ExpressionExperimentSubSetServiceTest
class	FactorValueNeedsAttentionServiceTest
class	FactorValueServiceIntegrationTest
class	SingleCellIntegrationTest

Uses of BaseTest in ubic.gemma.persistence.service.genome

Subclasses of BaseTest in ubic.gemma.persistence.service.genome

Modifier and Type	Class	Description
class	BioSequencePersistTest
class	TaxonServiceImplTest
class	TaxonUtilsTest

Uses of BaseTest in ubic.gemma.persistence.service.genome.gene

Subclasses of BaseTest in ubic.gemma.persistence.service.genome.gene

Modifier and Type	Class	Description
class	GeneSearchTest
class	GeneServiceTest
class	GeneSetServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.genome.sequenceAnalysis

Subclasses of BaseTest in ubic.gemma.persistence.service.genome.sequenceAnalysis

Modifier and Type	Class	Description
class	BlatAssociationServiceTest
class	BlatResultServiceTest

Uses of BaseTest in ubic.gemma.persistence.service.maintenance

Subclasses of BaseTest in ubic.gemma.persistence.service.maintenance

Modifier and Type	Class	Description
class	TableMaintenanceUtilIntegrationTest
class	TableMaintenanceUtilTest

Uses of BaseTest in ubic.gemma.persistence.util

Subclasses of BaseTest in ubic.gemma.persistence.util

Modifier and Type	Class	Description
class	AclCriteriaUtilsTest
class	AclQueryUtilsTest
class	DateStorageTest
class	PointcutsTest
class	ServiceBasedValueObjectConverterTest

Uses of BaseTest in ubic.gemma.rest

Subclasses of BaseTest in ubic.gemma.rest

Modifier and Type	Class	Description
class	OpenApiTest

Uses of BaseTest in ubic.gemma.rest.serializers

Subclasses of BaseTest in ubic.gemma.rest.serializers

Modifier and Type	Class	Description
class	FactorValueValueObjectSerializerTest

Uses of BaseTest in ubic.gemma.rest.servlet

Subclasses of BaseTest in ubic.gemma.rest.servlet

Modifier and Type	Class	Description
class	CorsFilterTest

Uses of BaseTest in ubic.gemma.rest.util.args

Subclasses of BaseTest in ubic.gemma.rest.util.args

Modifier and Type	Class	Description
class	GeneArgServiceTest
class	TaxonArgServiceTest

Uses of BaseTest in ubic.gemma.web.controller

Subclasses of BaseTest in ubic.gemma.web.controller

Modifier and Type	Class	Description
class	ErrorPagesTest

Uses of BaseTest in ubic.gemma.web.controller.common

Subclasses of BaseTest in ubic.gemma.web.controller.common

Modifier and Type	Class	Description
class	HomePageControllerTest

Uses of BaseTest in ubic.gemma.web.controller.common.auditAndSecurity

Subclasses of BaseTest in ubic.gemma.web.controller.common.auditAndSecurity

Modifier and Type	Class	Description
class	AuditControllerTest
class	SignupControllerTest	This test replaces the recaptcha service used by SignupController, so it is annotated with DirtiesContext to invalidate the context once all the tests have completed.
class	UserFormMultiActionControllerTest

Uses of BaseTest in ubic.gemma.web.controller.common.description.bibref

Subclasses of BaseTest in ubic.gemma.web.controller.common.description.bibref

Modifier and Type	Class	Description
class	BibRefControllerTest	Tests the BibliographicReferenceController
class	PubMedQueryControllerTest

Uses of BaseTest in ubic.gemma.web.controller.common.rss

Subclasses of BaseTest in ubic.gemma.web.controller.common.rss

Modifier and Type	Class	Description
class	RssFeedControllerTest

Uses of BaseTest in ubic.gemma.web.controller.diff

Subclasses of BaseTest in ubic.gemma.web.controller.diff

Modifier and Type	Class	Description
class	DifferentialExpressionAnalysisControllerTest

Uses of BaseTest in ubic.gemma.web.controller.expression.arrayDesign

Subclasses of BaseTest in ubic.gemma.web.controller.expression.arrayDesign

Modifier and Type	Class	Description
class	ArrayDesignControllerTest

Uses of BaseTest in ubic.gemma.web.controller.expression.experiment

Subclasses of BaseTest in ubic.gemma.web.controller.expression.experiment

Modifier and Type	Class	Description
class	ExperimentalDesignControllerIntegrationTest
class	ExperimentalDesignControllerTest
class	ExpressionDataFileUploadControllerTest
class	ExpressionExperimentControllerTest
class	ExpressionExperimentEditControllerTest
class	ExpressionExperimentQCControllerTest

Uses of BaseTest in ubic.gemma.web.controller.job

Subclasses of BaseTest in ubic.gemma.web.controller.job

Modifier and Type	Class	Description
class	ProgressStatusControllerTest	Test of long job control.

Uses of BaseTest in ubic.gemma.web.controller.ontology

Subclasses of BaseTest in ubic.gemma.web.controller.ontology

Modifier and Type	Class	Description
class	OntologyControllerTest

Uses of BaseTest in ubic.gemma.web.controller.search

Subclasses of BaseTest in ubic.gemma.web.controller.search

Modifier and Type	Class	Description
class	GeneralSearchControllerTest

Uses of BaseTest in ubic.gemma.web.controller.security

Subclasses of BaseTest in ubic.gemma.web.controller.security

Modifier and Type	Class	Description
class	SecurityControllerTest

Uses of BaseTest in ubic.gemma.web.util

Subclasses of BaseTest in ubic.gemma.web.util

Modifier and Type	Class	Description
class	BaseSpringWebTest	Deprecated. favour the simpler BaseWebIntegrationTest for new tests
class	BaseWebIntegrationTest	Base class for web integration tests.
class	BaseWebTest	Base class for a Web-based unit test.
class	MessageSourceTest
class	StaticAssetResolverTest