List of all 21,872 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Liu, Junlin et al. (2025) 5-HT6R-ATR-primary cilia network supports morphine-related memory extinction in the medial prefrontal cortex.; iScience, 28: 113208 |
|
GSE273842 |
| Liu, Kuancan et al. (2013) Sox2 cooperates with inflammation-mediated Stat3 activation in the malignant transformation of foregut basal progenitor cells.; Cell Stem Cell, 12: 304-15 |
|
GSE37857 |
| Liu, Li-Fen et al. (2013) Age-related modulation of the effects of obesity on gene expression profiles of mouse bone marrow and epididymal adipocytes.; PLoS One, 8: e72367 |
|
GSE27017 |
| Liu, Li-Yu Daisy et al. (2012) Major Functional Transcriptome of an Inferred Center Regulator of an ER(-) Breast Cancer Model System.; Cancer Inform, 11: 87-111 |
|
GSE32641 |
| Liu, Lin et al. (2021) Identification of a KLF5-dependent program and drug development for skeletal muscle atrophy.; Proc Natl Acad Sci U S A, 118: [no pages] |
|
GSE165071 |
| Liu, Ling et al. (2013) Chromatin modifications as determinants of muscle stem cell quiescence and chronological aging.; Cell Rep, 4: 189-204 |
|
GSE47177 |
| Liu, Lingling et al. (2022) Epigenetic Regulation of TET1-SP1 During Spermatogonia Self-Renewal and Proliferation.; Front Physiol, 13: 843825 |
|
GSE193717 |
| Liu, Liu et al. (2022) Arginine methylation of BRD4 by PRMT2/4 governs transcription and DNA repair.; Sci Adv, 8: eadd8928 |
|
GSE206667 |
| Liu, Longqi et al. (2014) Transcriptional pause release is a rate-limiting step for somatic cell reprogramming.; Cell Stem Cell, 15: 574-88 |
|
GSE59813 |
| Liu, M et al. (2023) Porphyromonas gingivalisEvades Immune Clearance by Regulating Lysosome Efflux.; J Dent Res, 102: 555-564 |
|
GSE192887 |
| Liu, Man et al. (2023) Three-Dimensional Gene Regulation Network in Glioblastoma Ferroptosis.; Int J Mol Sci, 24: [no pages] |
|
GSE236253 |
| Liu, Matthew A et al. (2022) Gut microbial DNA and immune checkpoint gene Vsig4/CRIg are key antagonistic players in healthy aging and age-associated development of hypertension and diabetes.; Front Endocrinol (Lausanne), 13: 1037465 |
|
GSE217145 |
| Liu, Meng-Lu et al. (2013) Small molecules enable neurogenin 2 to efficiently convert human fibroblasts into cholinergic neurons.; Nat Commun, 4: 2183 |
|
GSE45954 |
| Liu, Mengjie et al. (2020) The polycomb group protein PCGF6 mediates germline gene silencing by recruiting histone-modifying proteins to target gene promoters.; J Biol Chem, 295: 9712-9724 |
|
GSE143206 |
| Liu, Na et al. (2025) A noncanonical parasubthalamic nucleus-to-extended amygdala circuit converts chronic social stress into anxiety.; J Clin Invest, 135: [no pages] |
|
GSE298438 |
| Liu, Nancy Q et al. (2022) gp130/STAT3 signaling is required for homeostatic proliferation and anabolism in postnatal growth plate and articular chondrocytes.; Commun Biol, 5: 64 |
|
GSE188353 |
| Liu, Nian et al. (2023) Eubacterium rectaleImproves the Efficacy of Anti-PD1 Immunotherapy in Melanoma via l-Serine-Mediated NK Cell Activation.; Research (Wash D C), 6: 0127 |
|
GSE225920 |
| Liu, Nick W et al. (2013) Impact of ischemia and procurement conditions on gene expression in renal cell carcinoma.; Clin Cancer Res, 19: 42-9 |
|
GSE41137 |
| Liu, Norika Mengchia et al. (2013) Transcription Profiles of Endothelial Cells in the Rat Ductus Arteriosus during a Perinatal Period.; PLoS One, 8: e73685 |
|
GSE40500 |
| Liu, Pei Y et al. (2019) The long noncoding RNA lncNB1 promotes tumorigenesis by interacting with ribosomal protein RPL35.; Nat Commun, 10: 5026 |
|
GSE132109 |
| Liu, Pei-Pei et al. (2022) Acetate supplementation restores cognitive deficits caused by ARID1A haploinsufficiency in excitatory neurons.; EMBO Mol Med, 14: e15795 |
|
GSE198916 |
| Liu, Pei-Pei et al. (2023) Abnormal chromatin remodeling caused by ARID1A deletion leads to malformation of the dentate gyrus.; Cell Death Differ, 30: 2187-2199 |
|
GSE169562 |
| Liu, Peng et al. (2021) CBFB-MYH11 Fusion Sequesters RUNX1 in Cytoplasm to Prevent DNMT3A Recruitment to Target Genes in AML.; Front Cell Dev Biol, 9: 675424 |
|
GSE169682 |
| Liu, Philip T et al. (2006) Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response.; Science, 311: 1770-3 |
|
GSE8921 |
| Liu, Pingyu et al. (2015) Histone deacetylation promotes mouse neural induction by restricting Nodal-dependent mesendoderm fate.; Nat Commun, 6: 6830 |
|
GSE66026 |
| Liu, Qian et al. (2021) miR-221/222 suppression induced by activation of the cAMP/PKA/CREB1 pathway is required for cAMP-induced bidirectional differentiation of glioma cells.; FEBS Lett, 595: 2829-2843 |
|
GSE182413 |
| Liu, Qingkun et al. (2019) Peripheral TREM1 responses to brain and intestinal immunogens amplify stroke severity.; Nat Immunol, 20: 1023-1034 |
|
GSE105132 |
| Liu, Qiong et al. (2020) Cerebellum-enriched protein INPP5A contributes to selective neuropathology in mouse model of spinocerebellar ataxias type 17.; Nat Commun, 11: 1101 |
|
GSE145067 |
| Liu, Qiong et al. (2022) Expression of expanded GGC repeats withinNOTCH2NLCcauses behavioral deficits and neurodegeneration in a mouse model of neuronal intranuclear inclusion disease.; Sci Adv, 8: eadd6391 |
|
GSE182878.2 GSE182878.1 |
| Liu, Rong et al. (2023) Single-cell RNA-sequencing identifies various proportions of excitatory and inhibitory neurons in cultured human fetal brain cortical tissues.; Front Neurosci, 17: 1177747 |
|
GSE224114 |
| Liu, Rong-Zong et al. (2011) Association of FABP5 expression with poor survival in triple-negative breast cancer: implication for retinoic acid therapy.; Am J Pathol, 178: 997-1008 |
|
GSE22820 |
| Liu, Ruijie et al. (2015) Why weight? Modelling sample and observational level variability improves power in RNA-seq analyses.; Nucleic Acids Res, 43: e97 |
|
GSE64098 |
| Liu, Ruilong et al. (2025) Nuclear GTPSCS functions as a lactyl-CoA synthetase to promote histone lactylation and gliomagenesis.; Cell Metab, 37: 377-394.e9 |
|
GSE248703 |
| Liu, Shaohui et al. (2013) Effect of growth factors on the proliferation and gene expression of human meibomian gland epithelial cells.; Invest Ophthalmol Vis Sci, 54: 2541-50 |
|
GSE18099 |
| Liu, Shichao et al. (2026) Hormonal stimulation induces broader decidualization responses than cAMP alone in 3D human endometrial organoids.; bioRxiv, [no vol.]: [no pages] |
|
GSE325553 |
| Liu, Shini et al. (2024) CDC7 Inhibition Potentiates Antitumor Efficacy of PARP Inhibitor in Advanced Ovarian Cancer.; Adv Sci (Weinh), 11: e2403782 |
|
GSE247622 |
| Liu, Shirelle X et al. (2021) Repeated morphine exposure activates synaptogenesis and other neuroplasticity-related gene networks in the dorsomedial prefrontal cortex of male and female rats.; Drug Alcohol Depend, 221: 108598 |
|
GSE233922 |
| Liu, Shirelle X et al. (2023) Sex-Specific Effects of Early-Life Iron Deficiency and Prenatal Choline Treatment on Adult Rat Hippocampal Transcriptome.; Nutrients, 15: [no pages] |
|
GSE229266 |
| Liu, Shizhao et al. (2026) Development and validation of a comprehensive in vitro organ model for androgenetic alopecia.; BMC Biotechnol, 26: [no pages] |
|
GSE267664 |
| Liu, Shuying et al. (2009) Expression of autotaxin and lysophosphatidic acid receptors increases mammary tumorigenesis, invasion, and metastases.; Cancer Cell, 15: 539-50 |
|
GSE15263 |
| Liu, Siling et al. (2023) ADAM10- and γ-secretase-dependent cleavage of the transmembrane protein PTPRT attenuates neurodegeneration in the mouse model of Alzheimer's disease.; FASEB J, 37: e22734 |
|
GSE159943 |
| Liu, Siyi et al. (2022) HnRNP K regulates inflammatory gene expression by mediating splicing pattern of transcriptional factors.; Exp Biol Med (Maywood), [no vol.]: 15353702221110649 |
|
GSE148385 |
| Liu, Song et al. (2017) A comprehensive analysis of coregulator recruitment, androgen receptor function and gene expression in prostate cancer.; Elife, 6: [no pages] |
|
GSE81780 |
| Liu, Songming et al. (2023) Sorafenib induces cardiotoxicity through RBM20-mediated alternative splicing of sarcomeric and mitochondrial genes.; Pharmacol Res, 198: 107017 |
|
GSE222642 |
| Liu, Songyi et al. (2024) NAT10 Phase Separation Regulates YTHDF1 Splicing to Promote Gastric Cancer Progression.; Cancer Res, 84: 3207-3222 |
|
GSE270390 |
| Liu, Suling et al. (2014) Breast Cancer Stem Cells Transition between Epithelial and Mesenchymal States Reflective of their Normal Counterparts.; Stem Cell Reports, 2: 78-91 |
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GSE52327 GSE52262 |
| Liu, Susu et al. (2023) CPSF6 regulates alternative polyadenylation and proliferation of cancer cells through phase separation.; Cell Rep, 42: 113197 |
|
GSE231823 |
| Liu, Tian-Tian et al. (2022) Ablation of cDC2 development by triple mutations within the Zeb2 enhancer.; Nature, 607: 142-148 |
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GSE188564 |
| Liu, Tianxian et al. (2025) Mycobacterial PstP impairs host RNA alternative splicing by dephosphorylation of spliceosome RBMX at S189.; IMetaOmics, 2: e53 |
|
GSE264715 |
| Liu, Tianyi et al. (2024) Machine Learning-Directed Conversion of Glioblastoma Cells to Dendritic Cell-Like Antigen-Presenting Cells as Cancer Immunotherapy.; Cancer Immunol Res, 12: 1340-1360 |
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GSE270857 |
| Liu, Ting et al. (2026) f-SPION-mediated magnetic stimulation induces reparative Schwann cell reprogramming via cytoskeletal dynamics - gated activation of Piezo1.; J Nanobiotechnology, 24: [no pages] |
|
GSE306137 GSE305996 |
| Liu, TingYu M et al. (2025) Dysregulation of AGO2-miRNA dynamics underlies the AGO2-associated Lessel-Kreienkamp syndrome.; Nucleic Acids Res, 53: [no pages] |
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GSE308750 GSE294381 |
| Liu, Tong Ming et al. (2013) Molecular basis of immortalization of human mesenchymal stem cells by combination of p53 knockdown and human telomerase reverse transcriptase overexpression.; Stem Cells Dev, 22: 268-78 |
|
GSE28546 |
| Liu, Tongfei et al. (2020) Multi-omic comparison of Alzheimer's variants in human ESC-derived microglia reveals convergence at APOE.; J Exp Med, 217: [no pages] |
|
GSE153658 |
| Liu, Tsunglin et al. (2007) Detection of a microRNA signal in an in vivo expression set of mRNAs.; PLoS One, 2: e804 |
|
GSE8692 |
| Liu, Tzu-Yu et al. (2017) Time-Resolved Proteomics Extends Ribosome Profiling-Based Measurements of Protein Synthesis Dynamics.; Cell Syst, 4: 636-644.e9 |
|
GSE69047.2 |
| Liu, Wei et al. (2022) Genotoxicity, oxidative stress and transcriptomic effects of Nitenpyram on human bone marrow mesenchymal stem cells.; Toxicol Appl Pharmacol, 446: 116065 |
|
GSE171835 |
| Liu, Wei et al. (2026) Tau aggregates cause reactivation of transposable DNA elements, leading to Z-RNA-ZBP1-mediated neuronal death.; Nat Neurosci, [no vol.]: [no pages] |
|
GSE306753 |
| Liu, Weicheng et al. (2013) Intestinal epithelial vitamin D receptor signaling inhibits experimental colitis.; J Clin Invest, 123: 3983-96 |
|
GSE37283 |
| Liu, Weijian et al. (2023) Traumatic brain injury stimulates sympathetic tone-mediated bone marrow myelopoiesis to favor fracture healing.; Signal Transduct Target Ther, 8: 260 |
|
GSE229258 |
| Liu, Weiying et al. (2017) ?-Sheet Breaker Peptide-HPYD for the Treatment of Alzheimer's Disease: Primary Studies on Behavioral Test and Transcriptional Profiling.; Front Pharmacol, 8: 969 |
|
GSE104249 |
| Liu, Wen et al. (2023) Integrated insight into the molecular mechanisms of selenium-modulated, MPP+-induced cytotoxicity in a Parkinson's disease model.; J Trace Elem Med Biol, 79: 127208 |
|
GSE186702 |
| Liu, Wenbin et al. (2022) Gene expression profile associated with Asmt knockout-induced depression-like behaviors and exercise effects in mouse hypothalamus.; Biosci Rep, 42: [no pages] |
|
GSE197888 |
| Liu, Wenfei et al. (2020) Trem2 promotes anti-inflammatory responses in microglia and is suppressed under pro-inflammatory conditions.; Hum Mol Genet, 29: 3224-3248 |
|
GSE157891 |
| Liu, Wenhua et al. (2023) PQBP1 regulates striatum development through balancing striatal progenitor proliferation and differentiation.; Cell Rep, 42: 112277 |
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GSE225486 |
| Liu, Wensu et al. (2024) Knowledge graph construction based on granulosa cells transcriptome from polycystic ovary syndrome with normoandrogen and hyperandrogen.; J Ovarian Res, 17: 38 |
|
GSE137684 |
| Liu, Wenwen et al. (2025) CD146+pericyte-like lung cancer brain metastatic stem cells promote tumor angiogenesis through dual regulatory effects on the VEGF/VEGFR axis.; Theranostics, 16: 1905-1924 |
|
GSE248935 |
| Liu, X Shawn et al. (2018) Rescue of Fragile X Syndrome Neurons by DNA Methylation Editing of the FMR1 Gene.; Cell, 172: 979-992.e6 |
|
GSE108498 |
| Liu, Xiao-Bo et al. (2019) Hepatic arginase deficiency fosters dysmyelination during postnatal CNS development.; JCI Insight, 4: [no pages] |
|
GSE132058 |
| Liu, Xiaojun et al. (2009) Angiotensin-converting enzyme is a modifier of hypertensive end organ damage.; J Biol Chem, 284: 15564-72 |
|
GSE12670 |
| Liu, Xiaoping et al. (2005) Increased susceptibility to transcriptional changes with novel stressor in adrenal medulla of rats exposed to prolonged cold stress.; Brain Res Mol Brain Res, 141: 19-29 |
|
GSE2875 |
| Liu, Xiaozhuo et al. (2017) Idiopathic Autism: Cellular and Molecular Phenotypes in Pluripotent Stem Cell-Derived Neurons.; Mol Neurobiol, 54: 4507-4523 |
|
GSE65106 |
| Liu, Xiling et al. (2012) Extension of cortical synaptic development distinguishes humans from chimpanzees and macaques.; Genome Res, 22: 611-22 |
|
GSE29139 |
| Liu, Xiling et al. (2016) Disruption of an Evolutionarily Novel Synaptic Expression Pattern in Autism.; PLoS Biol, 14: e1002558 |
|
GSE59288.1 |
| Liu, Xindong et al. (2014) Transcription factor achaete-scute homologue 2 initiates follicular T-helper-cell development.; Nature, 507: 513-8 |
|
GSE52838 |
| Liu, Xingfeng et al. (2025) Prolonged glucagon exposure rewires lipid oxidation and drives diabetic kidney disease progression.; Nat Commun, 16: 8561 |
|
GSE253774 |
| Liu, Xinhong et al. (2023) Aberrant accumulation of Kras-dependent pervasive transcripts during tumor progression renders cancer cells dependent on PAF1 expression.; Cell Rep, 42: 112979 |
|
GSE217742 GSE217744 GSE217741 |
| Liu, Xinyuan et al. (2020) SOX1 Is Required for the Specification of Rostral Hindbrain Neural Progenitor Cells from Human Embryonic Stem Cells.; iScience, 23: 101475 |
|
GSE138217 |
| Liu, Xiu-Xiu et al. (2022) BOD1 regulates the cerebellar IV/V lobe-fastigial nucleus circuit associated with motor coordination.; Signal Transduct Target Ther, 7: 170 |
|
GSE199327 |
| Liu, Xue et al. (2022) Calorie restriction and calorie dilution have different impacts on body fat, metabolism, behavior, and hypothalamic gene expression.; Cell Rep, 39: 110835 |
|
GSE200820 |
| Liu, Xueting et al. (2023) Microglia-neuron interactions promote chronic itch via the NLRP3-IL-1β-GRPR axis.; Allergy, 78: 1570-1584 |
|
GSE152637 |
| Liu, Xueyuan et al. (2023) Preeclampsia promotes autism in offspring via maternal inflammation and fetal NFκB signaling.; Life Sci Alliance, 6: [no pages] |
|
GSE167193 GSE167194 |
| Liu, Xuezhao et al. (2024) Small-molecule-induced epigenetic rejuvenation promotes SREBP condensation and overcomes barriers to CNS myelin regeneration.; Cell, 187: 2465-2484.e22 |
|
GSE232955.2 GSE232955.1 |
| Liu, Yan-Shan et al. (2024) Comparative Analysis of Molecular Landscape in Mouse Models and Patients Reveals Conserved Inflammation Pathways in Age-Related Macular Degeneration.; Invest Ophthalmol Vis Sci, 65: 13 |
|
GSE207171 |
| Liu, Yang et al. (2021) A high level of KLF12 causes folic acid-resistant neural tube defects by activating the Shh signalling pathway in mice.; Biol Reprod, [no vol.]: [no pages] |
|
GSE166054 |
| Liu, Yang et al. (2021) Dopamine signaling regulates hematopoietic stem and progenitor cell function.; Blood, 138: 2051-2065 |
|
GSE134444 GSE126219 |
| Liu, Yang et al. (2022) CAMTA1gene affects the ischemia-reperfusion injury by regulatingCCND1.; Front Cell Neurosci, 16: 868291 |
|
GSE205687 |
| Liu, Yang et al. (2023) DNA-initiated epigenetic cascades driven by C9orf72 hexanucleotide repeat.; Neuron, 111: 1205-1221.e9 |
|
GSE223507 |
| Liu, Yang et al. (2024) Endogenous mutant Huntingtin alters the corticogenesis via lowering Golgi recruiting ARF1 in cortical organoid.; Mol Psychiatry, 29: 3024-3039 |
|
GSE220847 |
| Liu, Yanjiang et al. (2023) Functional dissection of PRC1 subunits RYBP and YAF2 during neural differentiation of embryonic stem cells.; Nat Commun, 14: 7164 |
|
GSE213413 |
| Liu, Yanxia et al. (2018) CRISPR Activation Screens Systematically Identify Factors that Drive Neuronal Fate and Reprogramming.; Cell Stem Cell, 23: 758-771.e8 |
|
GSE118560 |