List of all 21,871 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Liu, Yao-Zhong et al. (2005) A novel pathophysiological mechanism for osteoporosis suggested by an in vivo gene expression study of circulating monocytes.; J Biol Chem, 280: 29011-6 |
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GSE2208 |
| Liu, Yating et al. (2020) TRAP-based allelic translation efficiency imbalance analysis to identify genetic regulation of ribosome occupancy in specific cell types <i>in vivo</i>; bioRxiv, [no vol.]: [no pages] |
|
GSE156414 |
| Liu, Yawei et al. (2014) FoxA1 directs the lineage and immunosuppressive properties of a novel regulatory T cell population in EAE and MS.; Nat Med, 20: 272-82 |
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GSE54490 |
| Liu, Yaxin et al. (2019) Mitochondrial carrier protein overloading and misfolding induce aggresomes and proteostatic adaptations in the cytosol.; Mol Biol Cell, 30: 1272-1284 |
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GSE108622 |
| Liu, Yi et al. (2020) Chromosome 3q26 Gain Is an Early Event Driving Coordinated Overexpression of the PRKCI, SOX2, and ECT2 Oncogenes in Lung Squamous Cell Carcinoma.; Cell Rep, 30: 771-782.e6 |
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GSE141666 |
| Liu, Yi et al. (2024) MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.; Neuron, 112: 1943-1958.e10 |
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GSE230714 |
| Liu, Yi-Si et al. (2023) A comparison of the impact on neuronal transcriptome and cognition of rAAV5 transduction with three different doses in the mouse hippocampus.; Front Mol Neurosci, 16: 1195327 |
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GSE139997 |
| Liu, Yidan et al. (2017) UHRF2 regulates local 5-methylcytosine and suppresses spontaneous seizures.; Epigenetics, 12: 551-560 |
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GSE98360 |
| Liu, Yihao et al. (2025) Tumor-associated Schwann cell remodeling under metabolic stress via lactate sensing orchestrates pancreatic ductal adenocarcinoma development.; Cell Metab, 37: 1907-1925.e14 |
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GSE303766.1 |
| Liu, Yikui et al. (2024) Interaction Between the PERK/ATF4 Branch of the Endoplasmic Reticulum Stress and Mitochondrial One-Carbon Metabolism Regulates Neuronal Survival After Intracerebral Hemorrhage.; Int J Biol Sci, 20: 4277-4296 |
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GSE263244 GSE263227 |
| Liu, Yingjun et al. (2022) Brain aging is faithfully modelled in organotypic brain slices and accelerated by prions.; Commun Biol, 5: 557 |
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GSE144738 |
| Liu, Yiyun et al. (2021) Rutaecarpine Inhibits U87 Glioblastoma Cell Migration by Activating the Aryl Hydrocarbon Receptor Signaling Pathway.; Front Mol Neurosci, 14: 765712 |
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GSE183606 |
| Liu, Yizhou et al. (2007) Structural basis for recognition of SMRT/N-CoR by the MYND domain and its contribution to AML1/ETO's activity.; Cancer Cell, 11: 483-97 |
|
GSE7324 |
| Liu, Yongqing et al. (2024) KAT6A deficiency impairs cognitive functions through suppressing RSPO2/Wnt signaling in hippocampal CA3.; Sci Adv, 10: eadm9326 |
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GSE261058 |
| Liu, Yu et al. (2014) Hhex and Cer1 mediate the Sox17 pathway for cardiac mesoderm formation in embryonic stem cells.; Stem Cells, 32: 1515-26 |
|
GSE71528 |
| Liu, Yuan et al. (2024) Modeling lung adenocarcinoma metastases using patient-derived organoids.; Cell Rep Med, 5: 101777 |
|
GSE276387 |
| Liu, Yubing et al. (2010) Cooperation between myogenic regulatory factors and SIX family transcription factors is important for myoblast differentiation.; Nucleic Acids Res, 38: 6857-71 |
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GSE19967 GSE19968 |
| Liu, Yubing et al. (2023) Early postnatal defects in neurogenesis in the 3xTg mouse model of Alzheimer's disease.; Cell Death Dis, 14: 138 |
|
GSE218323 |
| Liu, Yue et al. (2025) De novo assembly and delivery of synthetic megabase-scale human DNA into mouse early embryos.; Nat Methods, 22: 1686-1697 |
|
GSE250094.1 |
| Liu, Yueyang et al. (2025) Renoprotective effects of GHRH agonist MR409 is associated with reduced oxidative stress and ferroptosis in diabetic mice.; Front Pharmacol, 16: 1617185 |
|
GSE294491 |
| Liu, Yujie et al. (2012) Two lysines in the forkhead domain of foxp3 are key to T regulatory cell function.; PLoS One, 7: e29035 |
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GSE27082 |
| Liu, Yunhua et al. (2018) Somatic mutation of the cohesin complex subunit confers therapeutic vulnerabilities in cancer.; J Clin Invest, 128: 2951-2965 |
|
GSE111004 |
| Liu, Yutao et al. (2013) Gene expression profile in human trabecular meshwork from patients with primary open-angle glaucoma.; Invest Ophthalmol Vis Sci, 54: 6382-9 |
|
GSE27276 |
| Liu, Yuting et al. (2013) Cold-induced RNA-binding proteins regulate circadian gene expression by controlling alternative polyadenylation.; Sci Rep, 3: 2054 |
|
GSE40468 |
| Liu, Yuting et al. (2023) CTCF coordinates cell fate specification via orchestrating regulatory hubs with pioneer transcription factors.; Cell Rep, 42: 113259 |
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GSE233946 |
| Liu, Yuwei et al. (2023) EIF5A2 specifically regulates the transcription of aging-related genes in human neuroblastoma cells.; BMC Geriatr, 23: 83 |
|
GSE159473 |
| Liu, Z et al. (2016) Identification of CASZ1 NES reveals potential mechanisms for loss of CASZ1 tumor suppressor activity in neuroblastoma.; Oncogene, [no vol.]: [no pages] |
|
GSE78927 |
| Liu, Zejin et al. (2023) Naringenin confers protection against experimental autoimmune encephalomyelitis through modulating the gut-brain axis: A multiomics analysis.; J Nutr Biochem, 122: 109448 |
|
GSE238061 |
| Liu, Zemin et al. (2026) Osteocytic FSH inhibition rescues bone mass and boosts fracture healing in ovariectomized mice.; Life Sci, 385: 124121 |
|
GSE305679 |
| Liu, Zhandong et al. (2008) Singular value decomposition-based regression identifies activation of endogenous signaling pathways in vivo.; Genome Biol, 9: R180 |
|
GSE13986 |
| Liu, Zhe et al. (2011) Control of embryonic stem cell lineage commitment by core promoter factor, TAF3.; Cell, 146: 720-31 |
|
GSE31271 |
| Liu, Zhe et al. (2023) Selective deletion of zinc transporter 3 in amacrine cells promotes retinal ganglion cell survival and optic nerve regeneration after injury.; Neural Regen Res, 18: 2773-2780 |
|
GSE213937 |
| Liu, Zhen et al. (2016) Mediator MED23 cooperates with RUNX2 to drive osteoblast differentiation and bone development.; Nat Commun, 7: 11149 |
|
GSE77007 |
| Liu, Zhen et al. (2022) RNA Helicase DHX37 Facilitates Liver Cancer Progression by Cooperating with PLRG1 to Drive Superenhancer-Mediated Transcription of Cyclin D1.; Cancer Res, 82: 1937-1952 |
|
GSE185701 |
| Liu, Zhengzhi et al. (2024) Epigenomic tomography for probing spatially defined chromatin state in the brain.; Cell Rep Methods, 4: 100738 |
|
GSE215972.1 |
| Liu, Zhenqing et al. (2023) Astrocytic response mediated by the CLU risk allele inhibits OPC proliferation and myelination in a human iPSC model.; Cell Rep, 42: 112841 |
|
GSE193218 |
| Liu, Zhidong et al. (2018) Sp9 Regulates Medial Ganglionic Eminence-Derived Cortical Interneuron Development.; Cereb Cortex, [no vol.]: [no pages] |
|
GSE99049 |
| Liu, Zhigang et al. (2020) Gut microbiota mediates intermittent-fasting alleviation of diabetes-induced cognitive impairment.; Nat Commun, 11: 855 |
|
GSE125387 |
| Liu, Zhilin et al. (2013) FOXO1/3 depletion in granulosa cells alters follicle growth, death and regulation of pituitary FSH.; Mol Endocrinol, 27: 238-52 |
|
GSE35593 |
| Liu, Zhiwei et al. (2014) PER1 phosphorylation specifies feeding rhythm in mice.; Cell Rep, 7: 1509-20 |
|
GSE56161 |
| Liu, Zhiyong et al. (2023) Encephalitis and poor neuronal death-mediated control of herpes simplex virus in human inherited RIPK3 deficiency.; Sci Immunol, 8: eade2860 |
|
GSE228495 |
| Liu, Zhongyu et al. (2011) Gene expression profiling in human high-grade astrocytomas.; Comp Funct Genomics, 2011: 245137 |
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GSE19728 |
| Liu, Zixu et al. (2019) A NIK-SIX signalling axis controls inflammation by targeted silencing of non-canonical NF-κB.; Nature, 568: 249-253 |
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GSE126535.1 GSE126535.2 GSE126535.3 |
| Liukkonen, Mikko et al. (2024) Oxidative Stress and Inflammation-Related mRNAs Are Elevated in Serum of a Finnish Wet AMD Cohort.; Invest Ophthalmol Vis Sci, 65: 30 |
|
GSE273435 |
| Livanos, Alexandra E et al. (2016) Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in mice.; Nat Microbiol, 1: 16140 |
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GSE81648 |
| Liyanarachchi, Sandya et al. (2016) Genome-Wide Expression Screening Discloses Long Noncoding RNAs Involved in Thyroid Carcinogenesis.; J Clin Endocrinol Metab, 101: 4005-4013 |
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GSE83520 |
| Lizen, Benoit et al. (2017) Conditional Loss ofHoxa5Function Early after Birth Impacts on Expression of Genes with Synaptic Function.; Front Mol Neurosci, 10: 369 |
|
GSE103390 |
| Llabata, Paula et al. (2021) MAX mutant small-cell lung cancers exhibit impaired activities of MGA-dependent noncanonical polycomb repressive complex.; Proc Natl Acad Sci U S A, 118: [no pages] |
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GSE144457 |
| Llano-Diez, Monica et al. (2011) Muscle wasting and the temporal gene expression pattern in a novel rat intensive care unit model.; BMC Genomics, 12: 602 |
|
GSE30848 |
| Llorens, Franc et al. (2013) PrP(C) regulates epidermal growth factor receptor function and cell shape dynamics in Neuro2a cells.; J Neurochem, [no vol.]: [no pages] |
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GSE38887 |
| Llorens, Franc et al. (2017) Altered Ca2+homeostasis induces Calpain-Cathepsin axis activation in sporadic Creutzfeldt-Jakob disease.; Acta Neuropathol Commun, 5: 35 |
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GSE90977 |
| Llorens-Bobadilla, Enric et al. (2020) A latent lineage potential in resident neural stem cells enables spinal cord repair.; Science, 370: [no pages] |
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GSE148316.2 |
| Llorente, Alicia et al. (2023) MAF amplification licenses ERα through epigenetic remodelling to drive breast cancer metastasis.; Nat Cell Biol, 25: 1833-1847 |
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GSE210607 |
| Lloyd, Eloise G et al. (2025) SMAD4 and KRAS Status Shapes Cancer Cell-Stromal Cross-Talk and Therapeutic Response in Pancreatic Cancer.; Cancer Res, 85: 1368-1389 |
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GSE263080.1 GSE263080.2 |
| Lo Cascio, Costanza et al. (2021) Nonredundant, isoform-specific roles of HDAC1 in glioma stem cells.; JCI Insight, 6: [no pages] |
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GSE179882 |
| Lo Cascio, Costanza et al. (2023) Quisinostat is a brain-penetrant radiosensitizer in glioblastoma.; JCI Insight, 8: [no pages] |
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GSE241227 |
| Lo Conte, Michela et al. (2024) Unraveling the impact of ZZZ3 on the mTOR/ribosome pathway in human embryonic stem cells homeostasis.; Stem Cell Reports, 19: 729-743 |
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GSE242489 |
| Lo Iacono, Luisa et al. (2017) Social threat exposure in juvenile mice promotes cocaine-seeking by altering blood clotting and brain vasculature.; Addict Biol, 22: 911-922 |
|
GSE69019 |
| Lo Iacono, Luisa et al. (2021) Early life adversity affecting the attachment bond alters ventral tegmental area transcriptomic patterning and behavior almost exclusively in female mice.; Neurobiol Stress, 15: 100406 |
|
GSE165922 |
| Lo Iacono, Marco et al. (2006) The Hay Wells syndrome-derived TAp63alphaQ540L mutant has impaired transcriptional and cell growth regulatory activity.; Cell Cycle, 5: 78-87 |
|
GSE8646 |
| Lo, Blanche Ka Ki et al. (2010) CXCR3/ligands are significantly involved in the tumorigenesis of basal cell carcinomas.; Am J Pathol, 176: 2435-46 |
|
GSE6520 |
| Lo, Fang-Yi et al. (2012) The database of chromosome imbalance regions and genes resided in lung cancer from Asian and Caucasian identified by array-comparative genomic hybridization.; BMC Cancer, 12: 235 |
|
GSE21933 |
| Lo, Joelle et al. (2024) The RNA binding protein HNRNPA2B1 regulates RNA abundance and motor protein activity in neurites.; bioRxiv, [no vol.]: [no pages] |
|
GSE275212 |
| Lo, Kinyui Alice et al. (2011) Genome-wide profiling of H3K56 acetylation and transcription factor binding sites in human adipocytes.; PLoS One, 6: e19778 |
|
GSE24422 |
| Lo, Kinyui Alice et al. (2013) Analysis of in vitro insulin-resistance models and their physiological relevance to in vivo diet-induced adipose insulin resistance.; Cell Rep, 5: 259-70 |
|
GSE35724 |
| Lo, Li-Wen et al. (2021) Marginal Zone B Cells Assist With Neutrophil Accumulation to Fight Against SystemicStaphylococcus aureusInfection.; Front Immunol, 12: 636818 |
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GSE157176 |
| Loayza-Puch, Fabricio et al. (2013) p53 induces transcriptional and translational programs to suppress cell proliferation and growth.; Genome Biol, 14: R32 |
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GSE42509.2 |
| Lobanova, Anastasia et al. (2017) Different requirements of functional telomeres in neural stem cells and terminally differentiated neurons.; Genes Dev, 31: 639-647 |
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GSE95056 |
| Lobera, Mercedes et al. (2013) Selective class IIa histone deacetylase inhibition via a nonchelating zinc-binding group.; Nat Chem Biol, 9: 319-25 |
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GSE44621 |
| Lobov, Ivan B et al. (2011) The Dll4/Notch pathway controls postangiogenic blood vessel remodeling and regression by modulating vasoconstriction and blood flow.; Blood, 117: 6728-37 |
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GSE28516 |
| Lobsiger, Christian S et al. (2007) Toxicity from different SOD1 mutants dysregulates the complement system and the neuronal regenerative response in ALS motor neurons.; Proc Natl Acad Sci U S A, 104: 7319-26 |
|
GSE7493 |
| Lobón-Iglesias, María-Jesús et al. (2023) Imaging and multi-omics datasets converge to define different neural progenitor origins for ATRT-SHH subgroups.; Nat Commun, 14: 6669 |
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GSE241734 GSE241733 |
| Locascio, Joseph J et al. (2015) Association between ?-synuclein blood transcripts and early, neuroimaging-supported Parkinson's disease.; Brain, 138: 2659-71 |
|
GSE57475 |
| Locatelli, S L et al. (2013) Perifosine and sorafenib combination induces mitochondrial cell death and antitumor effects in NOD/SCID mice with Hodgkin lymphoma cell line xenografts.; Leukemia, 27: 1677-87 |
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GSE31058 GSE31057 GSE31059 |
| Locatelli, S L et al. (2014) BIM upregulation and ROS-dependent necroptosis mediate the antitumor effects of the HDACi Givinostat and Sorafenib in Hodgkin lymphoma cell line xenografts.; Leukemia, 28: 1861-71 |
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GSE65483 GSE65479 |
| Locci, Michela et al. (2013) Human circulating PD-1+CXCR3-CXCR5+ memory Tfh cells are highly functional and correlate with broadly neutralizing HIV antibody responses.; Immunity, 39: 758-69 |
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GSE50392 |
| Locci, Michela et al. (2016) Activin A programs the differentiation of human TFH cells.; Nat Immunol, 17: 976-84 |
|
GSE78276 |
| Lochmann, Timothy L et al. (2018) Targeted inhibition of histone H3K27 demethylation is effective in high-risk neuroblastoma.; Sci Transl Med, 10: [no pages] |
|
GSE110709 |
| Lockridge, Joseph B et al. (2008) Bioinformatic profiling of the transcriptional response of adult rat cardiomyocytes to distinct fatty acids.; J Lipid Res, 49: 1395-408 |
|
GSE21023 |
| Lockstone, H E et al. (2007) Gene expression profiling in the adult Down syndrome brain.; Genomics, 90: 647-60 |
|
GSE5390 |
| Lockyer, Eloise J et al. (2023) A heterotrimeric complex of Toxoplasma proteins promotes parasite survival in interferon gamma-stimulated human cells.; PLoS Biol, 21: e3002202 |
|
GSE230866 |
| Loda, Agnese et al. (2017) Genetic and epigenetic features direct differential efficiency of Xist-mediated silencing at X-chromosomal and autosomal locations.; Nat Commun, 8: 690 |
|
GSE92894 |
| Lodato, Michael A et al. (2013) SOX2 co-occupies distal enhancer elements with distinct POU factors in ESCs and NPCs to specify cell state.; PLoS Genet, 9: e1003288 |
|
GSE38850 |
| Lodato, Simona et al. (2014) Gene co-regulation by Fezf2 selects neurotransmitter identity and connectivity of corticospinal neurons.; Nat Neurosci, 17: 1046-54 |
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GSE56451 |
| Lodder, Elisabeth M et al. (2012) Dissection of a quantitative trait locus for PR interval duration identifies Tnni3k as a novel modulator of cardiac conduction.; PLoS Genet, 8: e1003113 |
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GSE27236 |
| Lodge, Daniel J et al. (2023) Discrete hippocampal projections are differentially regulated by parvalbumin and somatostatin interneurons.; Nat Commun, 14: 6653 |
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GSE244159 |
| Lodha, Jyoti et al. (2023) Adolescent social housing protects against adult emotional and cognitive deficits and alters the PFC and NAc transcriptome in male and female C57BL/6J mice.; Front Neurosci, 17: 1287584 |
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GSE242910 |
| Lodygin, Dmitri et al. (2019) Publisher Correction: β-Synuclein-reactive T cells induce autoimmune CNS grey matter degeneration.; Nature, 567: E15 |
|
GSE125298 |
| Loeliger, Burk W et al. (2020) Effect of Ionizing Radiation on Transcriptome during Neural Differentiation of Human Embryonic Stem Cells.; Radiat Res, 193: 460-470 |
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GSE137800 |
| Loeser, Richard F et al. (2013) Disease progression and phasic changes in gene expression in a mouse model of osteoarthritis.; PLoS One, 8: e54633 |
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GSE41342 |
| Löbler, Marian et al. (2013) Ocular fibroblast types differ in their mRNA profiles--implications for fibrosis prevention after aqueous shunt implantation.; Mol Vis, 19: 1321-31 |
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GSE40929 |