List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Malnassy, Greg et al. (2023) Inhibition of Abelson Tyrosine-Protein Kinase 2 Suppresses the Development of Alcohol-Associated Liver Disease by Decreasing PPARgamma Expression.; Cell Mol Gastroenterol Hepatol, 16: 685-709 |
|
GSE218773 GSE218781 |
| Malone, Clare F et al. (2023) Transcriptional Antagonism by CDK8 Inhibition Improves Therapeutic Efficacy of MEK Inhibitors.; Cancer Res, 83: 285-300 |
|
GSE190178 |
| Malovic, Emir et al. (2024) Epitranscriptomic reader YTHDF2 regulates SEK1(MAP2K4)-JNK-cJUN inflammatory signaling in astrocytes during neurotoxic stress.; iScience, 27: 110619 |
|
GSE254720 |
| Maltby, Connor J et al. (2024) AAGGG repeat expansions triggerRFC1-independent synaptic dysregulation in human CANVAS neurons.; Sci Adv, 10: eadn2321 |
|
GSE248343 GSE248344 GSE248342 |
| Maltsev, Alexander et al. (2023) Chronic Administration of Non-Constitutive Proteasome Inhibitor Modulates Long-Term Potentiation and Glutamate Signaling-Related Gene Expression in Murine Hippocampus.; Int J Mol Sci, 24: [no pages] |
|
GSE229000 |
| Maluf, D G et al. (2014) Evaluation of molecular profiles in calcineurin inhibitor toxicity post-kidney transplant: input to chronic allograft dysfunction.; Am J Transplant, 14: 1152-63 |
|
GSE53605 |
| Malvi, Parmanand et al. (2023) LIMK2 promotes melanoma tumor growth and metastasis through G3BP1-ESM1 pathway-mediated apoptosis inhibition.; Oncogene, 42: 1478-1491 |
|
GSE190479 |
| Man, Kevin et al. (2013) The transcription factor IRF4 is essential for TCR affinity-mediated metabolic programming and clonal expansion of T cells.; Nat Immunol, 14: 1155-65 |
|
GSE49929 |
| Managò, Antonella et al. (2019) Extracellular nicotinate phosphoribosyltransferase binds Toll like receptor 4 and mediates inflammation.; Nat Commun, 10: 4116 |
|
GSE135753 |
| Manca, Claudia et al. (2013) Host targeted activity of pyrazinamide in Mycobacterium tuberculosis infection.; PLoS One, 8: e74082 |
|
GSE48027 |
| Mancarella, Serena et al. (2022) The Tumor Microenvironment Drives Intrahepatic Cholangiocarcinoma Progression.; Int J Mol Sci, 23: [no pages] |
|
GSE150024 |
| Manceau, Valérie et al. (2012) The protein kinase KIS impacts gene expression during development and fear conditioning in adult mice.; PLoS One, 7: e43946 |
|
GSE38097 |
| Mancini, Cecilia et al. (2013) Genome-wide expression profiling and functional characterization of SCA28 lymphoblastoid cell lines reveal impairment in cell growth and activation of apoptotic pathways.; BMC Med Genomics, 6: 22 |
|
GSE42406 |
| Mancini, Mathieu et al. (2021) The c-Rel transcription factor limits early interferon and neuroinflammatory responses to prevent herpes simplex encephalitis onset in mice.; Sci Rep, 11: 21171 |
|
GSE168799 |
| Mancino, Samantha et al. (2023) Stability of Genomic Imprinting and X-Chromosome Inactivation in the Aging Brain; bioRxiv, [no vol.]: [no pages] |
|
GSE232546 |
| Mandal, Ranadip et al. (2022) The non-apoptotic function of Caspase-8 in negatively regulating the CDK9-mediated Ser2 phosphorylation of RNA polymerase II in cervical cancer.; Cell Mol Life Sci, 79: 597 |
|
GSE217360 |
| Mandegar, Mohammad A et al. (2016) CRISPR Interference Efficiently Induces Specific and Reversible Gene Silencing in Human iPSCs.; Cell Stem Cell, 18: 541-53 |
|
GSE76980 |
| Mandelboum, Shir et al. (2023) Effective extraction of polyribosomes exposes gene expression strategies in primary astrocytes.; Nucleic Acids Res, 51: 3375-3390 |
|
GSE216582 GSE216580 |
| Manella, Gal et al. (2020) Hypoxia induces a time- and tissue-specific response that elicits intertissue circadian clock misalignment.; Proc Natl Acad Sci U S A, 117: 779-786 |
|
GSE130613 |
| Manfredi-Lozano, Maria et al. (2022) GnRH replacement rescues cognition in Down syndrome.; Science, 377: eabq4515 |
|
GSE199974 |
| Mang, Géraldine M et al. (2015) A neuron-specific deletion of the microRNA-processing enzyme DICER induces severe but transient obesity in mice.; PLoS One, 10: e0116760 |
|
GSE61937 |
| Mange, François et al. (2017) Diurnal regulation of RNA polymerase III transcription is under the control of both the feeding-fasting response and the circadian clock.; Genome Res, 27: 973-984 |
|
GSE89658 |
| Mangold, Colleen A et al. (2017) Sexually divergent induction of microglial-associated neuroinflammation with hippocampal aging.; J Neuroinflammation, 14: 141 |
|
GSE85084 |
| Manh, Thien-Phong Vu et al. (2013) Plasmacytoid, conventional, and monocyte-derived dendritic cells undergo a profound and convergent genetic reprogramming during their maturation.; Eur J Immunol, 43: 1706-15 |
|
GSE45365 |
| Maningat, Patricia D et al. (2009) Gene expression in the human mammary epithelium during lactation: the milk fat globule transcriptome.; Physiol Genomics, 37: 12-22 |
|
GSE12669 |
| Maningat, Patricia D et al. (2011) Short-term administration of rhGH increases markers of cellular proliferation but not milk protein gene expression in normal lactating women.; Physiol Genomics, 43: 381-91 |
|
GSE15208 |
| Manini, Ivana et al. (2022) Identification of a Prognostic Microenvironment-Related Gene Signature in Glioblastoma Patients Treated with Carmustine Wafers.; Cancers (Basel), 14: [no pages] |
|
GSE199407 |
| Manion, John et al. (2020) Human induced pluripotent stem cell-derived GABAergic interneuron transplants attenuate neuropathic pain.; Pain, 161: 379-387 |
|
GSE115565 |
| Manley, Kate et al. (2007) Microarray analysis of glial cells resistant to JCV infection suggests a correlation between viral infection and inflammatory cytokine gene expression.; Virology, 366: 394-404 |
|
GSE7819 |
| Mann, Graham J et al. (2013) BRAF mutation, NRAS mutation, and the absence of an immune-related expressed gene profile predict poor outcome in patients with stage III melanoma.; J Invest Dermatol, 133: 509-17 |
|
GSE53118 |
| Manners, M T et al. (2019) Transgenerational inheritance of chronic adolescent stress: Effects of stress response and the amygdala transcriptome.; Genes Brain Behav, 18: e12493 |
|
GSE108452 |
| Mannini, Antonella et al. (2025) Ganglioside GD2 Contributes to a Stem-Like Phenotype in Intrahepatic Cholangiocarcinoma.; Liver Int, 45: e16208 |
|
GSE238179 |
| Mans, Jeffrey J et al. (2009) The degree of microbiome complexity influences the epithelial response to infection.; BMC Genomics, 10: 380 |
|
GSE12121 |
| Mansergh, Fiona C et al. (2015) Gene expression changes during retinal development and rod specification.; Mol Vis, 21: 61-87 |
|
GSE59201 |
| Mantas, Ioannis et al. (2024) Claustrum and dorsal endopiriform cortex complex cell-identity is determined by Nurr1 and regulates hallucinogenic-like states in mice.; Nat Commun, 15: 8176 |
|
GSE229732 |
| Manthey, Abby L et al. (2014) Loss of Sip1 leads to migration defects and retention of ectodermal markers during lens development.; Mech Dev, 131: 86-110 |
|
GSE49949 |
| Mantila Roosa, Sara M et al. (2011) Gene expression patterns in bone following mechanical loading.; J Bone Miner Res, 26: 100-12 |
|
GSE22286 |
| Manuylov, Nikolay L et al. (2009) Cardiac expression of Tnnt1 requires the GATA4-FOG2 transcription complex.; ScientificWorldJournal, 9: 575-87 |
|
GSE14906 |
| Mao, Ai-Ping et al. (2016) Multiple layers of transcriptional regulation by PLZF in NKT-cell development.; Proc Natl Acad Sci U S A, 113: 7602-7 |
|
GSE81771 |
| Mao, De Yu et al. (2021) CLIC1 and CLIC4 mediate endothelial S1P receptor signaling to facilitate Rac1 and RhoA activity and function.; Sci Signal, 14: [no pages] |
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GSE163568.2 GSE163568.1 |
| Mao, Hanqian et al. (2016) Haploinsufficiency for Core Exon Junction Complex Components Disrupts Embryonic Neurogenesis and Causes p53-Mediated Microcephaly.; PLoS Genet, 12: e1006282 |
|
GSE85576 |
| Mao, Jiude et al. (2020) Bisphenol A and bisphenol S disruptions of the mouse placenta and potential effects on the placenta-brain axis.; Proc Natl Acad Sci U S A, 117: 4642-4652 |
|
GSE141322 |
| Mao, Jiude et al. (2021) Placental Changes in the serotonin transporter (Slc6a4) knockout mouse suggest a role for serotonin in controlling nutrient acquisition.; Placenta, 115: 158-168 |
|
GSE175489 |
| Mao, Rong et al. (2005) Primary and secondary transcriptional effects in the developing human Down syndrome brain and heart.; Genome Biol, 6: R107 |
|
GSE1397 |
| Mao, Wendy et al. (2019) Immunogenicity of prostate cancer is augmented by BET bromodomain inhibition.; J Immunother Cancer, 7: 277 |
|
GSE126779 |
| Mao, Wenjie et al. (2018) Activity-Induced Regulation of Synaptic Strength through the Chromatin Reader L3mbtl1.; Cell Rep, 23: 3209-3222 |
|
GSE104802 |
| Mao, Yu et al. (2021) Targeting of histone methyltransferase DOT1L plays a dual role in chemosensitization of retinoblastoma cells and enhances the efficacy of chemotherapy.; Cell Death Dis, 12: 1141 |
|
GSE174167 |
| Mao, Yumeng et al. (2016) IL-15 activates mTOR and primes stress-activated gene expression leading to prolonged antitumor capacity of NK cells.; Blood, 128: 1475-89 |
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GSE77808 |
| Maor-Nof, Maya et al. (2016) Axonal Degeneration Is Regulated by a Transcriptional Program that Coordinates Expression of Pro- and Anti-degenerative Factors.; Neuron, 92: 991-1006 |
|
GSE72129 |
| Maor-Nof, Maya et al. (2021) p53 is a central regulator driving neurodegeneration caused by C9orf72 poly(PR).; Cell, 184: 689-708.e20 |
|
GSE162048.1 |
| Mar, Daniel et al. (2023) MultiomicsTracks96: A high throughput PIXUL-Matrix-based toolbox to profile frozen and FFPE tissues multiomes.; bioRxiv, [no vol.]: [no pages] |
|
GSE230108 |
| Marable, Carmen A et al. (2022) Integrated Omic Analyses Identify Pathways and Transcriptomic Regulators Associated With Chemical Alterations of In Vitro Neural Network Formation.; Toxicol Sci, 186: 118-133 |
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GSE174722 |
| Maranville, Joseph C et al. (2011) Interactions between glucocorticoid treatment and cis-regulatory polymorphisms contribute to cellular response phenotypes.; PLoS Genet, 7: e1002162 |
|
GSE29342 |
| Maranville, Joseph C et al. (2013) Genetic mapping with multiple levels of phenotypic information reveals determinants of lymphocyte glucocorticoid sensitivity.; Am J Hum Genet, 93: 735-43 |
|
GSE48801 |
| Marasca, R et al. (2006) Gene expression profiling of acute promyelocytic leukaemia identifies two subtypes mainly associated with flt3 mutational status.; Leukemia, 20: 103-14 |
|
GSE2550 |
| Marasco, Luciano E et al. (2022) Counteracting chromatin effects of a splicing-correcting antisense oligonucleotide improves its therapeutic efficacy in spinal muscular atrophy.; Cell, 185: 2057-2070.e15 |
|
GSE167762 |
| Marbiah, Masue M et al. (2014) Identification of a gene regulatory network associated with prion replication.; EMBO J, 33: 1527-47 |
|
GSE56275 |
| Marcadis, Andrea R et al. (2023) Rapid cancer cell perineural invasion utilizes amoeboid migration.; Proc Natl Acad Sci U S A, 120: e2210735120 |
|
GSE207319 |
| Marcellus, Kristen A et al. (2024) Polystyrene Nano- and Microplastic Particles Induce an Inflammatory Gene Expression Profile in Rat Neural Stem Cell-Derived Astrocytes In Vitro.; Nanomaterials (Basel), 14: [no pages] |
|
GSE256038 |
| Marchal-Duval, Emmeline et al. (2023) Identification of Paired-related Homeobox Protein 1 as a key mesenchymal transcription factor in pulmonary fibrosis.; Elife, 12: [no pages] |
|
GSE161364 |
| Marchand, Melanie et al. (2011) Transcriptomic signature of trophoblast differentiation in a human embryonic stem cell model.; Biol Reprod, 84: 1258-71 |
|
GSE30915 |
| Marchetto, Aruna et al. (2020) Oncogenic hijacking of a developmental transcription factor evokes vulnerability toward oxidative stress in Ewing sarcoma.; Nat Commun, 11: 2423 |
|
GSE120576 |
| Marchetto, Maria C et al. (2017) Altered proliferation and networks in neural cells derived from idiopathic autistic individuals.; Mol Psychiatry, 22: 820-835 |
|
GSE67528 |
| Marchetto, Maria C N et al. (2009) Transcriptional signature and memory retention of human-induced pluripotent stem cells.; PLoS One, 4: e7076 |
|
GSE18618 |
| Marchetto, Maria C N et al. (2010) A model for neural development and treatment of Rett syndrome using human induced pluripotent stem cells.; Cell, 143: 527-39 |
|
GSE21037 |
| Marcheva, Biliana et al. (2020) A role for alternative splicing in circadian control of exocytosis and glucose homeostasis.; Genes Dev, 34: 1089-1105 |
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GSE146916 |
| Marchiando, Amanda M et al. (2013) A deficiency in the autophagy gene Atg16L1 enhances resistance to enteric bacterial infection.; Cell Host Microbe, 14: 216-24 |
|
GSE49109 |
| Marchina, Eleonora et al. (2014) Gene expression profile in fibroblasts of Huntington's disease patients and controls.; J Neurol Sci, 337: 42-6 |
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GSE45516 |
| Marchion, Douglas C et al. (2011) BAD phosphorylation determines ovarian cancer chemosensitivity and patient survival.; Clin Cancer Res, 17: 6356-66 |
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GSE23553 GSE23554 |
| Marchionini, Deanna M et al. (2022) Benefits of global mutant huntingtin lowering diminish over time in a Huntington's disease mouse model.; JCI Insight, 7: [no pages] |
|
GSE156236 |
| Marchioretti, Caterina et al. (2023) Defective excitation-contraction coupling and mitochondrial respiration precede mitochondrial Ca2+accumulation in spinobulbar muscular atrophy skeletal muscle.; Nat Commun, 14: 602 |
|
GSE220080 GSE221480 |
| Marciniak, Stefan J et al. (2004) CHOP induces death by promoting protein synthesis and oxidation in the stressed endoplasmic reticulum.; Genes Dev, 18: 3066-77 |
|
GSE2082 |
| Marcinowski, Lisa et al. (2012) Real-time transcriptional profiling of cellular and viral gene expression during lytic cytomegalovirus infection.; PLoS Pathog, 8: e1002908 |
|
GSE35919 |
| Marco, Asaf et al. (2020) Mapping the epigenomic and transcriptomic interplay during memory formation and recall in the hippocampal engram ensemble.; Nat Neurosci, 23: 1606-1617 |
|
GSE152775 |
| Marconett, Crystal N et al. (2017) Cross-Species Transcriptome Profiling Identifies New Alveolar Epithelial Type I Cell-Specific Genes.; Am J Respir Cell Mol Biol, 56: 310-321 |
|
GSE59120 |
| Mardinly, A R et al. (2016) Sensory experience regulates cortical inhibition by inducing IGF1 in VIP neurons.; Nature, 531: 371-5 |
|
GSE77243 |
| Mardinoglu, Adil et al. (2015) The gut microbiota modulates host amino acid and glutathione metabolism in mice.; Mol Syst Biol, 11: 834 |
|
GSE31115 |
| Mardones, Muriel D et al. (2022) Transcriptome Profiling of the Hippocampal Seizure Network Implicates a Role for Wnt Signaling during Epileptogenesis in a Mouse Model of Temporal Lobe Epilepsy.; Int J Mol Sci, 23: [no pages] |
|
GSE213393 |
| Marechal, Damien et al. (2022) N-myc downstream regulated family member 1 (NDRG1) is enriched in myelinating oligodendrocytes and impacts myelin degradation in response to demyelination.; Glia, 70: 321-336 |
|
GSE113614 |
| Marechal, Elise et al. (2024) Oncogenic MAPK pathway activation disrupts Schwann cell fate commitment, inducing congenital and progressive neuropathy in mice; bioRxiv, [no vol.]: [no pages] |
|
GSE262048 |
| Marei, Hany E S et al. (2011) Gene expression profiling of embryonic human neural stem cells and dopaminergic neurons from adult human substantia nigra.; PLoS One, 6: e28420 |
|
GSE25931 |
| Marei, Hany E S et al. (2012) Gene expression profile of adult human olfactory bulb and embryonic neural stem cell suggests distinct signaling pathways and epigenetic control.; PLoS One, 7: e33542 |
|
GSE35390 |
| Maret, Stéphanie et al. (2007) Homer1a is a core brain molecular correlate of sleep loss.; Proc Natl Acad Sci U S A, 104: 20090-5 |
|
GSE9441 GSE9443 GSE9442 |
| Maretti-Mira, Ana Claudia et al. (2012) Transcriptome patterns from primary cutaneous Leishmania braziliensis infections associate with eventual development of mucosal disease in humans.; PLoS Negl Trop Dis, 6: e1816 |
|
GSE33601 |
| Margalef, Pol et al. (2015) BRAF-induced tumorigenesis is IKKα-dependent but NF-κB-independent.; Sci Signal, 8: ra38 |
|
GSE57979 |
| Margeta, Milica A et al. (2022) Apolipoprotein E4 impairs the response of neurodegenerative retinal microglia and prevents neuronal loss in glaucoma.; Immunity, 55: 1627-1644.e7 |
|
GSE192509 GSE192507 GSE192505 GSE192508 GSE192506 |
| Margier, Marielle et al. (2022) Nicotinamide Mononucleotide Administration Prevents Doxorubicin-Induced Cardiotoxicity and Loss in Physical Activity in Mice.; Cells, 12: [no pages] |
|
GSE221003 |