List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| McFadden, David G et al. (2014) p53 constrains progression to anaplastic thyroid carcinoma in a Braf-mutant mouse model of papillary thyroid cancer.; Proc Natl Acad Sci U S A, 111: E1600-9 |
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GSE55933 |
| McFarland, Amelia J et al. (2022) RNA sequencing on muscle biopsy from a 5-week bed rest study reveals the effect of exercise and potential interactions with dorsal root ganglion neurons.; Physiol Rep, 10: e15176 |
|
GSE186045 |
| McFarland, Hugh I et al. (2015) Rescue of CD8+ T cell vaccine memory following sublethal ? irradiation.; Vaccine, 33: 3865-72 |
|
GSE64434 |
| McFleder, Rhonda L et al. (2017) Dynamic Control of Dendritic mRNA Expression by CNOT7 Regulates Synaptic Efficacy and Higher Cognitive Function.; Cell Rep, 20: 683-696 |
|
GSE88777 |
| McFleder, Rhonda L et al. (2025) Deep brain stimulation halts Parkinson's disease-related immune dysregulation in the brain and peripheral blood.; Brain Behav Immun, 123: 851-862 |
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GSE263579.1 |
| McGann, James C et al. (2018) Neuronal activity induces glutathione metabolism gene expression in astrocytes.; Glia, 66: 2024-2039 |
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GSE69731 |
| McGee-Lawrence, Meghan E et al. (2014) Runx2 is required for early stages of endochondral bone formation but delays final stages of bone repair in Axin2-deficient mice.; Bone, 66: 277-86 |
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GSE59081 |
| McGeoghan, Farrell et al. (2023) RNA sequencing and lipidomics uncovers novel pathomechanisms in recessive X-linked ichthyosis.; Front Mol Biosci, 10: 1176802 |
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GSE232622 |
| McGill, Bryan E et al. (2018) Abnormal Microglia and Enhanced Inflammation-Related Gene Transcription in Mice with Conditional Deletion ofCtcfinCamk2a-Cre-Expressing Neurons.; J Neurosci, 38: 200-219 |
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GSE108825 GSE108826 |
| McGill, Mahalia M et al. (2020) The sex-specific role of p38 MAP kinase in CNS autoimmunity is regulated by estrogen receptor alpha.; J Neuroimmunol, 342: 577209 |
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GSE146370 |
| McGill, Mahalia M et al. (2021) p38 MAP Kinase Signaling in Microglia Plays a Sex-Specific Protective Role in CNS Autoimmunity and Regulates Microglial Transcriptional States.; Front Immunol, 12: 715311 |
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GSE180864 |
| McGivney, Gavin R et al. (2025) Somatic CRISPR tumorigenesis and multiomic analysis reveal a pentose phosphate pathway disruption vulnerability in MPNSTs.; Sci Adv, 11: eadu2906 |
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GSE275277 |
| McGlone, Emma Rose et al. (2023) Sleeve gastrectomy causes weight-loss independent improvements in hepatic steatosis.; Liver Int, 43: 1890-1900 |
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GSE225843 |
| McGlone, Emma Rose et al. (2024) Chronic treatment with glucagon-like peptide-1 and glucagon receptor co-agonist causes weight loss-independent improvements in hepatic steatosis in mice with diet-induced obesity.; Biomed Pharmacother, 176: 116888 |
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GSE243681 |
| McGrail, Kimberley et al. (2025) Transcriptional reprogramming triggered by neonatal UV radiation or Lkb1 loss prevents BRAFV600E-induced growth arrest in melanocytes.; Oncogene, 44: 1592-1608 |
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GSE254912 |
| McGrath, Erica L et al. (2017) Differential Responses of Human Fetal Brain Neural Stem Cells to Zika Virus Infection.; Stem Cell Reports, 8: 715-727 |
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GSE93385 |
| McGrath, Monica Forero et al. (2012) Ras dexamethasone-induced protein 1 is a modulator of hormone secretion in the volume overloaded heart.; Am J Physiol Heart Circ Physiol, 302: H1826-37 |
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GSE12758 |
| McGray, A J Robert et al. (2023) BiTE secretion by adoptively transferred stem-like T cells improves FRα+ ovarian cancer control.; J Immunother Cancer, 11: [no pages] |
|
GSE218730 |
| McGreevy, Kerry R et al. (2019) Intergenerational transmission of the positive effects of physical exercise on brain and cognition.; Proc Natl Acad Sci U S A, 116: 10103-10112 |
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GSE123582 |
| McGregor, Brett A et al. (2021) Alpha-Synuclein-induced DNA Methylation and Gene Expression in Microglia.; Neuroscience, 468: 186-198 |
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GSE158980 |
| McGregor, Eric R et al. (2024) Reversal of neuronal tau pathology, metabolic dysfunction, and electrophysiological defects via adiponectin pathway-dependent AMPK activation.; bioRxiv, [no vol.]: [no pages] |
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GSE255813 |
| McGuire, Caroline K et al. (2024) Transcriptional repression by HDAC3 mediates T cell exclusion fromKrasmutant lung tumors.; Proc Natl Acad Sci U S A, 121: e2317694121 |
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GSE277929 |
| McHale, Cliona M et al. (2011) Global gene expression profiling of a population exposed to a range of benzene levels.; Environ Health Perspect, 119: 628-34 |
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GSE21862 |
| McHugh, Domhnall et al. (2023) COPI vesicle formation and N-myristoylation are targetable vulnerabilities of senescent cells.; Nat Cell Biol, 25: 1804-1820 |
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GSE224070 |
| McIlvried, Lisa A et al. (2026) CGRP signaling links tumor-associated pain to immune evasion in oral squamous cell carcinoma.; Cell Rep, 45: 116994 |
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GSE315799 |
| McIntyre, Jeremy C et al. (2008) Emx2 stimulates odorant receptor gene expression.; Chem Senses, 33: 825-37 |
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GSE12135 |
| McKay, Erin C et al. (2019) Peri-Infarct Upregulation of the Oxytocin Receptor in Vascular Dementia.; J Neuropathol Exp Neurol, 78: 436-452 |
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GSE122063 |
| McKee, Adrienne E et al. (2007) Exon expression profiling reveals stimulus-mediated exon use in neural cells.; Genome Biol, 8: R159 |
|
GSE6976 |
| McKee, Celia A et al. (2022) Astrocytes deficient in circadian clock gene Bmal1 show enhanced activation responses to amyloid-beta pathology without changing plaque burden.; Sci Rep, 12: 1796 |
|
GSE227063 |
| McKee, Celia A et al. (2023) Circadian clock protein BMAL1 broadly influences autophagy and endolysosomal function in astrocytes.; Proc Natl Acad Sci U S A, 120: e2220551120 |
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GSE227932 GSE227633 |
| McKellar, Claire E et al. (2009) Synaptogenesis in purified cortical subplate neurons.; Cereb Cortex, [no vol.]: [no pages] |
|
GSE8318 |
| McKenna, William L et al. (2015) Mutual regulation between Satb2 and Fezf2 promotes subcerebral projection neuron identity in the developing cerebral cortex.; Proc Natl Acad Sci U S A, 112: 11702-7 |
|
GSE68912 |
| McKenzie, Andrew T et al. (2017) Multiscale network modeling of oligodendrocytes reveals molecular components of myelin dysregulation in Alzheimer's disease.; Mol Neurodegener, 12: 82 |
|
GSE80437 |
| McKenzie, Casey W et al. (2018) Strain-specific differences in brain gene expression in a hydrocephalic mouse model with motile cilia dysfunction.; Sci Rep, 8: 13370 |
|
GSE113233 |
| McKenzie, Jennifer A et al. (2011) Differential gene expression from microarray analysis distinguishes woven and lamellar bone formation in the rat ulna following mechanical loading.; PLoS One, 6: e29328 |
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GSE27065 |
| McKenzie, Mark D et al. (2019) Interconversion between Tumorigenic and Differentiated States in Acute Myeloid Leukemia.; Cell Stem Cell, 25: 258-272.e9 |
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GSE76875 GSE108946 |
| McKinney-Freeman, Shannon et al. (2012) The transcriptional landscape of hematopoietic stem cell ontogeny.; Cell Stem Cell, 11: 701-14 |
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GSE37000 |
| McKinsey, Gabriel L et al. (2025) Radial glia integrin avb8 regulates cell autonomous microglial TGFβ1 signaling that is necessary for microglial identity.; Nat Commun, 16: 2840 |
|
GSE236615 |
| McLean, Brent A et al. (2022) Glucagon-like Peptide-1 receptor Tie2+ cells are essential for the cardioprotective actions of liraglutide in mice with experimental myocardial infarction.; Mol Metab, 66: 101641 |
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GSE217736 |
| McLean, Carrie S et al. (2015) Gene and MicroRNA Expression Responses to Exercise; Relationship with Insulin Sensitivity.; PLoS One, 10: e0127089 |
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GSE43219 |
| McLean, Derek J et al. (2002) Oligonucleotide microarray analysis of gene expression in follicle-stimulating hormone-treated rat Sertoli cells.; Mol Endocrinol, 16: 2780-92 |
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GSE509 |
| McLellan, Janna et al. (2025) Gestational autoantibody exposure impacts early brain development in a rat model of MAR autism.; Mol Psychiatry, 30: 3018-3028 |
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GSE275431 |
| McMeekin, L J et al. (2021) Estrogen-related Receptor Alpha (ERRα) is Required for PGC-1α-dependent Gene Expression in the Mouse Brain.; Neuroscience, 479: 70-90 |
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GSE151499 |
| McMeekin, Laura J et al. (2018) Cell-Specific Deletion of PGC-1α from Medium Spiny Neurons Causes Transcriptional Alterations and Age-Related Motor Impairment.; J Neurosci, 38: 3273-3286 |
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GSE100510 |
| McMullen, Colleen A et al. (2004) Functional and genomic changes in the mouse ocular motor system in response to light deprivation from birth.; J Neurosci, 24: 161-9 |
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GSE3305 |
| McMullen, Colleen A et al. (2009) Age-related changes of cell death pathways in rat extraocular muscle.; Exp Gerontol, 44: 420-5 |
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GSE3309 |
| McMullen, Julie R et al. (2004) The insulin-like growth factor 1 receptor induces physiological heart growth via the phosphoinositide 3-kinase(p110alpha) pathway.; J Biol Chem, 279: 4782-93 |
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GSE558 GSE1143 |
| McMullin, Ryan P et al. (2014) A BRCA1 deficient-like signature is enriched in breast cancer brain metastases and predicts DNA damage-induced poly (ADP-ribose) polymerase inhibitor sensitivity.; Breast Cancer Res, 16: R25 |
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GSE43837 |
| McMurchy, Alicia N et al. (2013) A novel function for FOXP3 in humans: intrinsic regulation of conventional T cells.; Blood, 121: 1265-75 |
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GSE41087 |
| McMurray, Helene R et al. (2008) Synergistic response to oncogenic mutations defines gene class critical to cancer phenotype.; Nature, 453: 1112-6 |
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GSE9199 |
| McNamara, James W et al. (2023) Alpha kinase 3 signaling at the M-band maintains sarcomere integrity and proteostasis in striated muscle.; Nat Cardiovasc Res, 2: 159-173 |
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GSE215304 |
| McNamara, Niamh B et al. (2023) Microglia regulate central nervous system myelin growth and integrity.; Nature, 613: 120-129 |
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GSE215440.1 GSE215440.2 |
| McNeal, Andrew S et al. (2021) BRAFV600Einduces reversible mitotic arrest in human melanocytes via microrna-mediated suppression of AURKB.; Elife, 10: [no pages] |
|
GSE174372 |
| McNee, G et al. (2017) Citrullination of histone H3 drives IL-6 production by bone marrow mesenchymal stem cells in MGUS and multiple myeloma.; Leukemia, 31: 373-381 |
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GSE80608 |
| McNicholas, Michael et al. (2023) A Compendium of Syngeneic, Transplantable Pediatric High-Grade Glioma Models Reveals Subtype-Specific Therapeutic Vulnerabilities.; Cancer Discov, 13: 1592-1615 |
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GSE242998 |
| McNulty, James et al. (2023) Truncated ring-A amaryllidaceae alkaloid modulates the host cell integrated stress response, exhibiting antiviral activity to HSV-1 and SARSCoV-2.; Sci Rep, 13: 1639 |
|
GSE201156 |
| McQuade, Amanda et al. (2018) Development and validation of a simplified method to generate human microglia from pluripotent stem cells.; Mol Neurodegener, 13: 67 |
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GSE117829 |
| McQuade, Amanda et al. (2020) Gene expression and functional deficits underlie TREM2-knockout microglia responses in human models of Alzheimer's disease.; Nat Commun, 11: 5370 |
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GSE158469 GSE157652 |
| McQuattie-Pimentel, Alexandra C et al. (2021) The lung microenvironment shapes a dysfunctional response of alveolar macrophages in aging.; J Clin Invest, 131: [no pages] |
|
GSE134397 |
| McRae, Allan F et al. (2007) Replicated effects of sex and genotype on gene expression in human lymphoblastoid cell lines.; Hum Mol Genet, 16: 364-73 |
|
GSE7624 |
| McRae, Helen M et al. (2024) Loss of PHF6 causes spontaneous seizures, enlarged brain ventricles and altered transcription in the cortex of a mouse model of the Börjeson-Forssman-Lehmann intellectual disability syndrome.; PLoS Genet, 20: e1011428 |
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GSE275729 |
| McSweeney, Danny et al. (2022) CASKloss of function differentially regulates neuronal maturation and synaptic function in human induced cortical excitatory neurons.; iScience, 25: 105187 |
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GSE199910 |
| McWeeney, Shannon K et al. (2010) A gene expression signature of CD34+ cells to predict major cytogenetic response in chronic-phase chronic myeloid leukemia patients treated with imatinib.; Blood, 115: 315-25 |
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GSE14671 |
| Meaburn, Emma L et al. (2009) Assessing individual differences in genome-wide gene expression in human whole blood: reliability over four hours and stability over 10 months.; Twin Res Hum Genet, 12: 372-80 |
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GSE14844 |
| Mead, Andrew James et al. (2024) Loss of 15-Lipoxygenase in Retinodegenerative RCS Rats.; Int J Mol Sci, 25: [no pages] |
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GSE237804 |
| Meckel, Katherine R et al. (2024) Microbial short-chain fatty acids regulate drug seeking and transcriptional control in a model of cocaine seeking.; Neuropsychopharmacology, 49: 386-395 |
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GSE227980 |
| Mecklenburg, Jennifer et al. (2020) Transcriptomic sex differences in sensory neuronal populations of mice.; Sci Rep, 10: 15278 |
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GSE153269 GSE121645 GSE135909 |
| Mecklenburg, Jennifer et al. (2022) Sex-dependent pain trajectories induced by prolactin require an inflammatory response for pain resolution.; Brain Behav Immun, 101: 246-263 |
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GSE161826 GSE168563 |
| Meddeb, Mariam et al. (2016) Homogeneous Inflammatory Gene Profiles Induced in Human Dermal Fibroblasts in Response to the Three Main Species of Borrelia burgdorferi sensu lato.; PLoS One, 11: e0164117 |
|
GSE77058 |
| Medeiros-Furquim, Tiago et al. (2025) Microglia endotoxin tolerance is retained after enforced repopulation.; Brain Behav Immun, 128: 512-528 |
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GSE271535 |
| Medelnik, Jan-Philip et al. (2018) Signaling-Dependent Control of Apical Membrane Size and Self-Renewal in Rosette-Stage Human Neuroepithelial Stem Cells.; Stem Cell Reports, 10: 1751-1765 |
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GSE111597 |
| Medina-Dols, Aina et al. (2024) Role of PATJ in stroke prognosis by modulating endothelial to mesenchymal transition through the Hippo/Notch/PI3K axis.; Cell Death Discov, 10: 85 |
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GSE237919 |
| Medler, Terry R et al. (2016) HDAC6 Deacetylates HMGN2 to Regulate Stat5a Activity and Breast Cancer Growth.; Mol Cancer Res, 14: 994-1008 |
|
GSE81217 |
| Medon, Mikolaj et al. (2017) HDAC Inhibitor Panobinostat Engages Host Innate Immune Defenses to Promote the Tumoricidal Effects of Trastuzumab in HER2+Tumors.; Cancer Res, 77: 2594-2606 |
|
GSE81380 |
| Medrano, Jose L et al. (2017) The transcription factor MEF2A fine-tunes gene expression in the atrial and ventricular chambers of the adult heart.; J Biol Chem, 292: 20975-20988 |
|
GSE95364 |
| Medyouf, Hind et al. (2011) High-level IGF1R expression is required for leukemia-initiating cell activity in T-ALL and is supported by Notch signaling.; J Exp Med, [no vol.]: [no pages] |
|
GSE29959 |
| Meecham, Amelia et al. (2025) SilencingKRIT1Partially Reverses the Effects of Disturbed Flow on the Endothelial Cell Transcriptome.; Int J Mol Sci, 26: [no pages] |
|
GSE288811 |
| Meert, Lize et al. (2025) A CHD8-TRRAP axis facilitates MYC and E2F target gene regulation in human neural stem cells.; iScience, 28: 111978 |
|
GSE247131 |
| Megagiannis, Platon et al. (2024) Autism-associated CHD8 controls reactive gliosis and neuroinflammation via remodeling chromatin in astrocytes.; Cell Rep, 43: 114637 |
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GSE271651 GSE271650 |
| Meganathan, Kesavan et al. (2017) Regulatory networks specifying cortical interneurons from human embryonic stem cells reveal roles for CHD2 in interneuron development.; Proc Natl Acad Sci U S A, 114: E11180-E11189 |
|
GSE99937 |
| Meganathan, Kesavan et al. (2021) Altered neuronal physiology, development, and function associated with a common chromosome 15 duplication involving CHRNA7.; BMC Biol, 19: 147 |
|
GSE143908 |
| Megat, Salim et al. (2019) Nociceptor Translational Profiling Reveals the Ragulator-Rag GTPase Complex as a Critical Generator of Neuropathic Pain.; J Neurosci, 39: 393-411 |
|
GSE113941 |
| Meguro-Horike, Makiko et al. (2026) Haploinsufficiency of MBD5 and MBD6 impairs mitochondrial respiration through chromatin-mediated gene regulation.; Biochem Biophys Res Commun, 800: 153288 |
|
GSE314092 |
| Megías-Fernández, Clara et al. (2025) DNA topoisomerase II promotes N6-adenosine mRNA methylation.; Cell Rep, 44: 116468 |
|
GSE281650 |
| Meharena, Hiruy S et al. (2022) Down-syndrome-induced senescence disrupts the nuclear architecture of neural progenitors.; Cell Stem Cell, 29: 116-130.e7 |
|
GSE185192 |
| Mehlich, Dawid et al. (2021) MLK4 regulates DNA damage response and promotes triple-negative breast cancer chemoresistance.; Cell Death Dis, 12: 1111 |
|
GSE174692 |
| Mehmood, Tahir et al. (2011) Transcriptome profile reveals AMPA receptor dysfunction in the hippocampus of the Rsk2-knockout mice, an animal model of Coffin-Lowry syndrome.; Hum Genet, 129: 255-69 |
|
GSE22137 |
| Mehnert, Janice M et al. (2022) BAMM (BRAF Autophagy and MEK Inhibition in Melanoma): A Phase I/II Trial of Dabrafenib, Trametinib, and Hydroxychloroquine in Advanced BRAFV600-mutant Melanoma.; Clin Cancer Res, 28: 1098-1106 |
|
GSE193157 |
| Mehraj, Vikram et al. (2013) Monocyte responses in the context of Q fever: from a static polarized model to a kinetic model of activation.; J Infect Dis, 208: 942-51 |
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GSE36537 |
| Mehta, D et al. (2014) Early predictive biomarkers for postpartum depression point to a role for estrogen receptor signaling.; Psychol Med, 44: 2309-22 |
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GSE45603 |