List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Nehmé, Alissar et al. (2009) Glucocorticoids with different chemical structures but similar glucocorticoid receptor potency regulate subsets of common and unique genes in human trabecular meshwork cells.; BMC Med Genomics, 2: 58 |
|
GSE16643 |
| Nekrasov, Evgeny D et al. (2016) Manifestation of Huntington's disease pathology in human induced pluripotent stem cell-derived neurons.; Mol Neurodegener, 11: 27 |
|
GSE77558 |
| Nellore, Anoma et al. (2023) A transcriptionally distinct subset of influenza-specific effector memory B cells predicts long-lived antibody responses to vaccination in humans.; Immunity, 56: 847-863.e8 |
|
GSE163989 |
| Nelson, Amanda M et al. (2009) Isotretinoin temporally regulates distinct sets of genes in patient skin.; J Invest Dermatol, 129: 1038-42 |
|
GSE11792 |
| Nelson, Andrew T et al. (2024) Glucose hypometabolism prompts RAN translation and exacerbates C9orf72-related ALS/FTD phenotypes.; EMBO Rep, 25: 2479-2510 |
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GSE260665 |
| Nelson, Erik R et al. (2013) 27-Hydroxycholesterol links hypercholesterolemia and breast cancer pathophysiology.; Science, 342: 1094-8 |
|
GSE46924 |
| Nelson, Gail M et al. (2007) Folate deficiency enhances arsenic effects on expression of genes involved in epidermal differentiation in transgenic K6/ODC mouse skin.; Toxicology, 241: 134-45 |
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GSE8733 |
| Nelson, Maxine R et al. (2023) The APOE-R136S mutation protects against APOE4-driven Tau pathology, neurodegeneration and neuroinflammation.; Nat Neurosci, 26: 2104-2121 |
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GSE217854 |
| Nelson, Megan M et al. (2021) Poly (ADP-Ribose) Polymerase 1 Regulates Cajal-Retzius Cell Development and Neural Precursor Cell Adhesion.; Front Cell Dev Biol, 9: 693595 |
|
GSE171852 |
| Nelson, Peter T et al. (2011) Specific sequence determinants of miR-15/107 microRNA gene group targets.; Nucleic Acids Res, 39: 8163-72 |
|
GSE42823 |
| Nemati, Shiva et al. (2026) Therapeutic reactivation of hippocampal progenitors reverse cognition decline in mice with progressive brain demyelination.; Stem Cell Reports, 21: 102896 |
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GSE287967 |
| Nemec, Kelsey M et al. (2026) Microglia replacement by ER-Hoxb8 conditionally immortalized macrophages provides insight into Aicardi-Goutières syndrome neuropathology.; Elife, 14: [no pages] |
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GSE314288.4 GSE314288.1 GSE314288.3 |
| Nemeth, Christina L et al. (2020) Neuronal ablation of mt-AspRS in mice induces immune pathway activation prior to severe and progressive cortical and behavioral disruption.; Exp Neurol, 326: 113164 |
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GSE141055 |
| Nemeth, Kimberly A et al. (2005) Searching for biomarkers of developmental toxicity with microarrays: normal eye morphogenesis in rodent embryos.; Toxicol Appl Pharmacol, 206: 219-28 |
|
GSE1075 |
| Neofytou, Christina et al. (2023) Irradiation and lithium treatment alter the global DNA methylation pattern and gene expression underlying a shift from gliogenesis towards neurogenesis in human neural progenitors.; Transl Psychiatry, 13: 258 |
|
GSE234353 |
| Nerubenko, Elena et al. (2024) Cushing's Disease Manifestation inUSP8-Mutated Corticotropinoma May Be Mediated by Interactions Between WNT Signaling and SST Trafficking.; Int J Mol Sci, 25: [no pages] |
|
GSE263206 |
| Nerurkar, S S et al. (2007) P38 MAPK inhibitors suppress biomarkers of hypertension end-organ damage, osteopontin and plasminogen activator inhibitor-1.; Biomarkers, 12: 87-112 |
|
GSE3403 |
| Nesnow, Stephen et al. (2009) Discrimination of tumorigenic triazole conazoles from phenobarbital by transcriptional analyses of mouse liver gene expression.; Toxicol Sci, 110: 68-83 |
|
GSE16777 |
| Nesteruk, Monika et al. (2014) Mitochondrial-related proteomic changes during obesity and fasting in mice are greater in the liver than skeletal muscles.; Funct Integr Genomics, 14: 245-59 |
|
GSE43691 |
| Nestor, Colm E et al. (2014) DNA methylation changes separate allergic patients from healthy controls and may reflect altered CD4+ T-cell population structure.; PLoS Genet, 10: e1004059 |
|
GSE50101 GSE50223 |
| Nettesheim, Emily R et al. (2025) Elevated PRDM13 Disrupts Photoreceptor Function and Survival in the Mammalian Retina.; Invest Ophthalmol Vis Sci, 66: 38 |
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GSE278881 |
| Nettles, Sabin A et al. (2023) MeCP2 represses the activity of topoisomerase IIβ in long neuronal genes.; Cell Rep, 42: 113538 |
|
GSE246461 |
| Neubauer, Oliver et al. (2013) Transcriptome analysis of neutrophils after endurance exercise reveals novel signaling mechanisms in the immune response to physiological stress.; J Appl Physiol (1985), [no vol.]: [no pages] |
|
GSE43856 |
| Neueder, Andreas et al. (2017) HSF1-dependent and -independent regulation of the mammalian in vivo heat shock response and its impairment in Huntington's disease mouse models.; Sci Rep, 7: 12556 |
|
GSE95602 |
| Neufeld, Lena et al. (2021) Microengineered perfusable 3D-bioprinted glioblastoma model for in vivo mimicry of tumor microenvironment.; Sci Adv, 7: [no pages] |
|
GSE178371 |
| Neumann, Björn et al. (2019) Metformin Restores CNS Remyelination Capacity by Rejuvenating Aged Stem Cells.; Cell Stem Cell, 25: 473-485.e8 |
|
GSE134765 |
| Neumann, Edwin N et al. (2024) Brainwide silencing of prion protein by AAV-mediated delivery of an engineered compact epigenetic editor.; Science, 384: ado7082 |
|
GSE255987 |
| Neumann, Jennifer et al. (2013) The natural anticancer compound rocaglamide selectively inhibits the G1-S-phase transition in cancer cells through the ATM/ATR-mediated Chk1/2 cell cycle checkpoints.; Int J Cancer, [no vol.]: [no pages] |
|
GSE41072 |
| Neumann, Jens et al. (2010) Gene expression profiles of lung adenocarcinoma linked to histopathological grading and survival but not to EGF-R status: a microarray study.; BMC Cancer, 10: 77 |
|
GSE17475 |
| Neupane, Manish et al. (2016) MECP2 Is a Frequently Amplified Oncogene with a Novel Epigenetic Mechanism That Mimics the Role of Activated RAS in Malignancy.; Cancer Discov, 6: 45-58 |
|
GSE61135 |
| Neurauter, Christine Gran et al. (2024) Enhanced glutathione levels confer resistance to apoptotic and ferroptotic programmed cell death in NEIL DNA glycosylase deficient HAP1 cells.; Free Radic Biol Med, 213: 470-487 |
|
GSE242290 |
| Neuss, Simone et al. (2010) Gene expression changes in primary human nasal epithelial cells exposed to formaldehyde in vitro.; Toxicol Lett, 198: 289-95 |
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GSE21477 |
| Neutzner, Melanie et al. (2023) Impact of aging on meningeal gene expression.; Fluids Barriers CNS, 20: 12 |
|
GSE224570 |
| Nevo, Shir et al. (2024) Tuft cells and fibroblasts promote thymus regeneration through ILC2-mediated type 2 immune response.; Sci Immunol, 9: eabq6930 |
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GSE244221 GSE244218 GSE244216 GSE244222 GSE244220 GSE244202 |
| Newbern, Jason M et al. (2011) Specific functions for ERK/MAPK signaling during PNS development.; Neuron, 69: 91-105 |
|
GSE24730 |
| Newell, Andrew J et al. (2023) Machine learning reveals common transcriptomic signatures across rat brain and placenta following developmental organophosphate ester exposure.; Toxicol Sci, 195: 103-122 |
|
GSE230516 |
| Newell, Kenneth A et al. (2010) Identification of a B cell signature associated with renal transplant tolerance in humans.; J Clin Invest, 120: 1836-47 |
|
GSE22229 |
| Newman, A G et al. (2025) Glial reactivity and cognitive decline follow chronic heterochromatin loss in neurons.; Nat Commun, 16: 7325 |
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GSE153331 |
| Newman, Elizabeth A et al. (2018) Foxd1 is required for terminal differentiation of anterior hypothalamic neuronal subtypes.; Dev Biol, 439: 102-111 |
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GSE108400 |
| Newman, John C et al. (2006) Cockayne syndrome group B protein (CSB) plays a general role in chromatin maintenance and remodeling.; Proc Natl Acad Sci U S A, 103: 9613-8 |
|
GSE3407 |
| Newton, Dwight F et al. (2022) Chronic Stress Induces Coordinated Cortical Microcircuit Cell-Type Transcriptomic Changes Consistent With Altered Information Processing.; Biol Psychiatry, 91: 798-809 |
|
GSE145521 |
| Newton, Kim et al. (2018) Ubiquitin ligase COP1 coordinates transcriptional programs that control cell type specification in the developing mouse brain.; Proc Natl Acad Sci U S A, 115: 11244-11249 |
|
GSE111564 |
| Neyazi, Sina et al. (2024) Transcriptomic and epigenetic dissection of spinal ependymoma (SP-EPN) identifies clinically relevant subtypes enriched for tumors with and without NF2 mutation.; Acta Neuropathol, 147: 22 |
|
GSE242992 |
| Neyrinck, Katrien et al. (2021) SOX9-induced Generation of Functional Astrocytes Supporting Neuronal Maturation in an All-human System.; Stem Cell Rev Rep, 17: 1855-1873 |
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GSE162892 |
| Neyroud, Daria et al. (2021) FoxP1 is a transcriptional repressor associated with cancer cachexia that induces skeletal muscle wasting and weakness.; J Cachexia Sarcopenia Muscle, 12: 421-442 |
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GSE153068 |
| Ng, Alex H M et al. (2020) A comprehensive library of human transcription factors for cell fate engineering.; Nat Biotechnol, [no vol.]: [no pages] |
|
GSE159778 |
| Ng, Gavin Yong-Quan et al. (2022) Integrative epigenomic and transcriptomic analyses reveal metabolic switching by intermittent fasting in brain.; Geroscience, 44: 2171-2194 |
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GSE135945 |
| Ng, Jian Ming Jeremy et al. (2012) Transcriptional insights on the regenerative mechanics of axotomized neurons in vitro.; J Cell Mol Med, 16: 789-811 |
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GSE23653 |
| Ng, King Pan et al. (2014) Physiologic hypoxia promotes maintenance of CML stem cells despite effective BCR-ABL1 inhibition.; Blood, 123: 3316-26 |
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GSE48294 |
| Ng, Lily et al. (2017) Deletion of the Thyroid Hormone-Activating Type 2 Deiodinase Rescues Cone Photoreceptor Degeneration but Not Deafness in Mice Lacking Type 3 Deiodinase.; Endocrinology, 158: 1999-2010 |
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GSE95016 |
| Ng, Lily et al. (2023) Biphasic expression of thyroid hormone receptor TRβ1 in mammalian retina and anterior ocular tissues.; Front Endocrinol (Lausanne), 14: 1174600 |
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GSE224863 |
| Ng, Michelle et al. (2023) Myeloid leukemia vulnerabilities embedded in long noncoding RNA locusMYNRL15.; iScience, 26: 107844 |
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GSE172238 |
| Ng, O H et al. (2014) Deregulated WNT signaling in childhood T-cell acute lymphoblastic leukemia.; Blood Cancer J, 4: e192 |
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GSE46170 |
| Ng, Pei Y et al. (2024) Senescence Targeting Methods Impact Alzheimer's Disease Features in 3xTg Mice.; J Alzheimers Dis, 97: 1751-1763 |
|
GSE231332 |
| Ng, Samuel Yao-Ming et al. (2009) Genome-wide lineage-specific transcriptional networks underscore Ikaros-dependent lymphoid priming in hematopoietic stem cells.; Immunity, 30: 493-507 |
|
GSE15330 |
| Ngo, Vu N et al. (2011) Oncogenically active MYD88 mutations in human lymphoma.; Nature, 470: 115-9 |
|
GSE22900 |
| Ngun, Tuck C et al. (2014) Feminized behavior and brain gene expression in a novel mouse model of Klinefelter Syndrome.; Arch Sex Behav, 43: 1043-57 |
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GSE48783 GSE48784 |
| Nguyen Huu, Thang et al. (2026) 1,1-Diethoxyethane enhances aerobic respiration in human mitochondria via activation of AMP-activated protein kinase.; Commun Biol, 9: [no pages] |
|
GSE319948 |
| Nguyen, Aaron N et al. (2010) Azacitidine and decitabine have different mechanisms of action in non-small cell lung cancer cell lines.; Lung Cancer (Auckl), 1: 119-140 |
|
GSE29077 |
| Nguyen, Aiden et al. (2024) Jumonji histone demethylases are therapeutic targets in small cell lung cancer.; Oncogene, 43: 2885-2899 |
|
GSE208446 |
| Nguyen, Andrew et al. (2023) HDACi-dependent Microenvironmental Normalization Overcomes Tumor Burden-induced T-cell Exhaustion.; Clin Cancer Res, 29: 4289-4305 |
|
GSE238222 |
| Nguyen, Celina et al. (2025) Transcriptional and epigenetic targets of MEF2C in human microglia contribute to cellular functions related to autism risk and age-related disease.; Nat Immunol, 26: 1989-2003 |
|
GSE270436 |
| Nguyen, Cuong Q et al. (2009) Differential gene expression in the salivary gland during development and onset of xerostomia in Sjögren's syndrome-like disease of the C57BL/6.NOD-Aec1Aec2 mouse.; Arthritis Res Ther, 11: R56 |
|
GSE15640 |
| Nguyen, Cuong Q et al. (2009) Differential gene expressions in the lacrimal gland during development and onset of keratoconjunctivitis sicca in Sjögren's syndrome (SJS)-like disease of the C57BL/6.NOD-Aec1Aec2 mouse.; Exp Eye Res, 88: 398-409 |
|
GSE48139 |
| Nguyen, David H et al. (2011) Radiation acts on the microenvironment to affect breast carcinogenesis by distinct mechanisms that decrease cancer latency and affect tumor type.; Cancer Cell, 19: 640-51 |
|
GSE18216 |
| Nguyen, David H et al. (2013) Murine microenvironment metaprofiles associate with human cancer etiology and intrinsic subtypes.; Clin Cancer Res, 19: 1353-62 |
|
GSE42742 |
| Nguyen, Di Kim et al. (2006) Dosage compensation of the active X chromosome in mammals.; Nat Genet, 38: 47-53 |
|
GSE3413 |
| Nguyen, Hong Phuong et al. (2023) Protein arginine methyltransferase 1 is a therapeutic vulnerability in multiple myeloma.; Front Immunol, 14: 1239614 |
|
GSE234807 |
| Nguyen, Huong et al. (2018) Epigenetic Regulation by BAF Complexes Limits Neural Stem Cell Proliferation by Suppressing Wnt Signaling in Late Embryonic Development.; Stem Cell Reports, 10: 1734-1750 |
|
GSE106711 |
| Nguyen, Huy et al. (2024) Histone deacetylase expression following cisplatin-induced acute kidney injury in male and female mice.; Am J Physiol Renal Physiol, 327: F623-F636 |
|
GSE263878 |
| Nguyen, Jennifer H et al. (2025) Developmental pyrethroid exposure disrupts molecular pathways for MAP kinase and circadian rhythms in mouse brain.; Physiol Genomics, 57: 240-253 |
|
GSE241185 |
| Nguyen, L S et al. (2012) Transcriptome profiling of UPF3B/NMD-deficient lymphoblastoid cells from patients with various forms of intellectual disability.; Mol Psychiatry, 17: 1103-15 |
|
GSE27199 |
| Nguyen, Lam Son et al. (2018) Role ofmiR-146ain neural stem cell differentiation and neural lineage determination: relevance for neurodevelopmental disorders.; Mol Autism, 9: 38 |
|
GSE100670 GSE114491 |
| Nguyen, Lien D et al. (2023) Small molecule regulators of microRNAs identified by high-throughput screen coupled with high-throughput sequencing.; Nat Commun, 14: 7575 |
|
GSE228348 |
| Nguyen, Lien D et al. (2025) A drug that induces the microRNA miR-124 enables differentiation of retinoic acid-resistant neuroblastoma cells.; Sci Signal, 18: eads2641 |
|
GSE270493 |
| Nguyen, Linh T et al. (2024) Absence of SMARCB1 in rhabdoid tumor cells increases sensitivity to translation inhibition and alters translation efficiency of specific mRNAs.; J Biol Chem, 300: 107988 |
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GSE268317 GSE268315 |
| Nguyen, Phi T et al. (2020) Microglial Remodeling of the Extracellular Matrix Promotes Synapse Plasticity.; Cell, 182: 388-403.e15 |
|
GSE150712 |
| Nguyen, Thai B et al. (2025) Aberrant splicing in Huntington's disease accompanies disrupted TDP-43 activity and altered m6A RNA modification.; Nat Neurosci, 28: 280-292 |
|
GSE278354.1.2 GSE278354.1.1 GSE278354.2 |
| Nguyen, Thi Hanh Tien et al. (2013) Corticosteroids for dengue - why don't they work?; PLoS Negl Trop Dis, 7: e2592 |
|
GSE40165 |
| Nguyen, Thu Van et al. (2023) Impact of exercise on brain-bone marrow interactions in chronic stress: potential mechanisms preventing stress-induced hypertension.; Physiol Genomics, 55: 222-234 |
|
GSE220747 |
| Nguyen, Timothy T et al. (2024) TFAP2 paralogs regulate midfacial development in part through a conserved ALX genetic pathway.; Development, 151: [no pages] |
|
GSE246685 |
| Nguyen, Tuan-Anh et al. (2025) A non-enzymatic role of Nudix hydrolase 5 in repressing purine de novo synthesis.; Science, 390: 1143-1150 |
|
GSE201334 |
| Nguyen, Xuan Thi Anh et al. (2024) MFSD7c functions as a transporter of choline at the blood-brain barrier.; Cell Res, 34: 245-257 |
|
GSE239589 |
| Nguyen, Yen T M et al. (2024) Toxoplasma gondii infection supports the infiltration of T cells into brain tumors.; J Neuroimmunol, 393: 578402 |
|
GSE268162 |
| Nguyen-Vu, Trang et al. (2013) Liver × receptor ligands disrupt breast cancer cell proliferation through an E2F-mediated mechanism.; Breast Cancer Res, 15: R51 |
|
GSE34987 |
| Ni, Chen et al. (2019) Doxorubicin-induced cardiotoxicity involves IFNγ-mediated metabolic reprogramming in cardiomyocytes.; J Pathol, 247: 320-332 |
|
GSE107113 |
| Ni, Chunyang et al. (2025) A programmed decline in ribosome levels governs human early neurodevelopment.; Nat Cell Biol, 27: 1240-1255 |
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GSE247456.2 |