List of all 20,081 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Sapienza, M R et al. (2014) Molecular profiling of blastic plasmacytoid dendritic cell neoplasm reveals a unique pattern and suggests selective sensitivity to NF-kB pathway inhibition.; Leukemia, 28: 1606-16 |
|
GSE62014 |
| Sapiro, Anne L et al. (2020) Zinc Finger RNA-Binding Protein Zn72D Regulates ADAR-Mediated RNA Editing in Neurons.; Cell Rep, 31: 107654 |
|
GSE126629 |
| Sapkota, Darshan et al. (2022) Activity-dependent translation dynamically alters the proteome of the perisynaptic astrocyte process.; Cell Rep, 41: 111474 |
|
GSE147830 |
| Saponaro, Marco et al. (2014) RECQL5 controls transcript elongation and suppresses genome instability associated with transcription stress.; Cell, 157: 1037-49 |
|
GSE49133 |
| Sarasin-Filipowicz, Magdalena et al. (2008) Interferon signaling and treatment outcome in chronic hepatitis C.; Proc Natl Acad Sci U S A, 105: 7034-9 |
|
GSE11190 |
| Sardar, Debosmita et al. (2023) Induction of astrocytic Slc22a3 regulates sensory processing through histone serotonylation.; Science, 380: eade0027 |
|
GSE229641 |
| Sareen, Dhruv et al. (2013) Targeting RNA foci in iPSC-derived motor neurons from ALS patients with a C9ORF72 repeat expansion.; Sci Transl Med, 5: 208ra149 |
|
GSE52202 |
| Sargin, Derya et al. (2020) Mapping the physiological and molecular markers of stress and SSRI antidepressant treatment in S100a10 corticostriatal neurons.; Mol Psychiatry, 25: 1112-1129 |
|
GSE202172 |
| Sarin, Sumeet et al. (2018) Role for Wnt Signaling in Retinal Neuropil Development: Analysis via RNA-Seq and In Vivo Somatic CRISPR Mutagenesis.; Neuron, 98: 109-126.e8 |
|
GSE98838 |
| Saris, Christiaan G J et al. (2013) Gene expression profile of SOD1-G93A mouse spinal cord, blood and muscle.; Amyotroph Lateral Scler Frontotemporal Degener, 14: 190-8 |
|
GSE27933 |
| Sarkar, Ambalika et al. (2014) Hippocampal HDAC4 contributes to postnatal fluoxetine-evoked depression-like behavior.; Neuropsychopharmacology, 39: 2221-32 |
|
GSE42940 |
| Sarkar, Anindita et al. (2018) Efficient Generation of CA3 Neurons from Human Pluripotent Stem Cells Enables Modeling of Hippocampal Connectivity In Vitro.; Cell Stem Cell, 22: 684-697.e9 |
|
GSE111977 |
| Sarkar, Surojit et al. (2008) Functional and genomic profiling of effector CD8 T cell subsets with distinct memory fates.; J Exp Med, 205: 625-40 |
|
GSE10239 |
| Sarode, Gaurav V et al. (2023) The role of intestine in metabolic dysregulation in murine Wilson disease.; bioRxiv, [no vol.]: [no pages] |
|
GSE279388 |
| Sarsenova, Meruert et al. (2024) Endometriotic lesions exhibit distinct metabolic signature compared to paired eutopic endometrium at the single-cell level.; Commun Biol, 7: 1026 |
|
GSE247695 |
| Sartor, Maureen A et al. (2010) ConceptGen: a gene set enrichment and gene set relation mapping tool.; Bioinformatics, 26: 456-63 |
|
GSE17708 |
| Sartori, Roberta et al. (2013) BMP signaling controls muscle mass.; Nat Genet, 45: 1309-18 |
|
GSE49826 |
| Sartorius, C A et al. (2016) Estrogen promotes the brain metastatic colonization of triple negative breast cancer cells via an astrocyte-mediated paracrine mechanism.; Oncogene, 35: 2881-92 |
|
GSE71272 |
| Sartorius, Rossella et al. (2015) Antigen delivery by filamentous bacteriophage fd displaying an anti-DEC-205 single-chain variable fragment confers adjuvanticity by triggering a TLR9-mediated immune response.; EMBO Mol Med, 7: 973-88 |
|
GSE60231 |
| Sarwal, Minnie et al. (2003) Molecular heterogeneity in acute renal allograft rejection identified by DNA microarray profiling.; N Engl J Med, 349: 125-38 |
|
GSE343 |
| Sasaki, Kazunori et al. (2019) 3,4,5-Tricaffeoylquinic acid induces adult neurogenesis and improves deficit of learning and memory in aging model senescence-accelerated prone 8 mice.; Aging (Albany NY), 11: 401-422 |
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GSE235835 |
| Sasaki, Tetsuya et al. (2013) Genome-Wide Gene Expression Profiling Revealed a Critical Role for GATA3 in the Maintenance of the Th2 Cell Identity.; PLoS One, 8: e66468 |
|
GSE46185 |
| Sashida, Goro et al. (2014) Ezh2 loss promotes development of myelodysplastic syndrome but attenuates its predisposition to leukaemic transformation.; Nat Commun, 5: 4177 |
|
GSE50537 |
| Sassano, Antonella et al. (2009) Regulation of leukemic cell differentiation and retinoid-induced gene expression by statins.; Mol Cancer Ther, 8: 615-25 |
|
GSE12870 |
| Sasse, Sarah K et al. (2013) The glucocorticoid receptor and KLF15 regulate gene expression dynamics and integrate signals through feed-forward circuitry.; Mol Cell Biol, 33: 2104-15 |
|
GSE44695 |
| Sathyamurthy, Anupama et al. (2018) Massively Parallel Single Nucleus Transcriptional Profiling Defines Spinal Cord Neurons and Their Activity during Behavior.; Cell Rep, 22: 2216-2225 |
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GSE103892 |
| Sato, Mitsuo et al. (2013) Human lung epithelial cells progressed to malignancy through specific oncogenic manipulations.; Mol Cancer Res, 11: 638-50 |
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GSE41271 |
| Sato, Shunsuke et al. (2012) Up-regulated aldo-keto reductase family 1 member B10 in chronic hepatitis C: association with serum alpha-fetoprotein and hepatocellular carcinoma.; Liver Int, 32: 1382-90 |
|
GSE32221 |
| Sato, Taro et al. (2024) Comprehensive Gene Expression Analysis Using Human Induced Pluripotent Stem Cells Derived from Patients with Sleep Bruxism: A Preliminary In Vitro Study.; Int J Mol Sci, 25: [no pages] |
|
GSE277985 |
| Sato, Yumi et al. (2016) Generation of a monoclonal antibody recognizing the CEACAM glycan structure and inhibiting adhesion using cancer tissue-originated spheroid as an antigen.; Sci Rep, 6: 24823 |
|
GSE76405 |
| Satoh, Akiko et al. (2015) Deficiency of Prdm13, a dorsomedial hypothalamus-enriched gene, mimics age-associated changes in sleep quality and adiposity.; Aging Cell, 14: 209-18 |
|
GSE58238 |
| Satoh, Kiyotoshi et al. (2017) Global metabolic reprogramming of colorectal cancer occurs at adenoma stage and is induced by MYC.; Proc Natl Acad Sci U S A, 114: E7697-E7706 |
|
GSE87693 GSE89076 |
| Satow, Reiko et al. (2010) Combined functional genome survey of therapeutic targets for hepatocellular carcinoma.; Clin Cancer Res, 16: 2518-28 |
|
GSE12941 |
| Saturne, Madrikha D et al. (2025) Differential regulation of coronal and lambdoid suture patency by PTHLH and HHIP activity in mice.; Development, 152: [no pages] |
|
GSE294710 |
| Satzer, David et al. (2015) T cell deficiency in spinal cord injury: altered locomotor recovery and whole-genome transcriptional analysis.; BMC Neurosci, 16: 74 |
|
GSE62760 |
| Saul, Michael C et al. (2012) A new mouse model for mania shares genetic correlates with human bipolar disorder.; PLoS One, 7: e38128 |
|
GSE29417 |
| Saul, Michael C et al. (2017) Transcriptional regulatory dynamics drive coordinated metabolic and neural response to social challenge in mice.; Genome Res, 27: 959-972 |
|
GSE80346 |
| Saulnier, N et al. (2012) Gene expression profiling of patients with latex and/or vegetable food allergy.; Eur Rev Med Pharmacol Sci, 16: 1197-210 |
|
GSE13619 |
| Saunderson, Emily A et al. (2023) CRISPR/dCas9 DNA methylation editing is heritable during human hematopoiesis and shapes immune progeny.; Proc Natl Acad Sci U S A, 120: e2300224120 |
|
GSE234342 |
| Saur, Anna-Lena et al. (2021) Formation of the node of Ranvier by Schwann cells is under control of transcription factor Sox10.; Glia, 69: 1464-1477 |
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GSE152687 |
| Sauter, Camille et al. (2024) Protein arginine methyltransferase 2 controls inflammatory signaling in acute myeloid leukemia.; Commun Biol, 7: 753 |
|
GSE266252 |
| Sautreuil, Camille et al. (2023) Prenatal Alcohol Exposure Impairs the Placenta-Cortex Transcriptomic Signature, Leading to Dysregulation of Angiogenic Pathways.; Int J Mol Sci, 24: [no pages] |
|
GSE241836 |
| Sauvageau, Martin et al. (2013) Multiple knockout mouse models reveal lincRNAs are required for life and brain development.; Elife, 2: e01749 |
|
GSE49581 GSE56785 |
| Savell, Katherine E et al. (2016) Extra-coding RNAs regulate neuronal DNA methylation dynamics.; Nat Commun, 7: 12091 |
|
GSE64902 |
| Savell, Katherine E et al. (2019) A Neuron-Optimized CRISPR/dCas9 Activation System for Robust and Specific Gene Regulation.; eNeuro, 6: [no pages] |
|
GSE117961 |
| Savell, Katherine E et al. (2020) A dopamine-induced gene expression signature regulates neuronal function and cocaine response.; Sci Adv, 6: eaba4221 |
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GSE137658 GSE137568 |
| Savino, Angela Maria et al. (2020) Metabolic adaptation of acute lymphoblastic leukemia to the central nervous system microenvironment is dependent on Stearoyl CoA desaturase.; Nat Cancer, 1: 998-1009 |
|
GSE135114 |
| Savino, Aurora et al. (2021) Lysergic acid diethylamide induces increased signalling entropy in rats' prefrontal cortex.; J Neurochem, [no vol.]: [no pages] |
|
GSE179379 GSE179378 |
| Savitz, Jonathan et al. (2013) Inflammation and neurological disease-related genes are differentially expressed in depressed patients with mood disorders and correlate with morphometric and functional imaging abnormalities.; Brain Behav Immun, 31: 161-71 |
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GSE39653 |
| Sawada, Tomoyo et al. (2025) SETD1A regulates psychiatric gene networks involved in genomic stability and synaptic function in rare and sporadic schizophrenia.; Nat Commun, [no vol.]: [no pages] |
|
GSE293155 |
| Sawai, Ayana et al. (2022) PRC1 sustains the integrity of neural fate in the absence of PRC2 function.; Elife, 11: [no pages] |
|
GSE175503 |
| Sawant, Deepali V et al. (2012) Bcl6 controls the Th2 inflammatory activity of regulatory T cells by repressing Gata3 function.; J Immunol, 189: 4759-69 |
|
GSE40493 |
| Sawicka, Anna et al. (2014) H3S28 phosphorylation is a hallmark of the transcriptional response to cellular stress.; Genome Res, 24: 1808-20 |
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GSE58746 |
| Sayadi, A et al. (2016) Functional features of EVI1 and EVI1Δ324 isoforms of MECOM gene in genome-wide transcription regulation and oncogenicity.; Oncogene, 35: 2311-21 |
|
GSE42251 |
| Sayed, Faten A et al. (2018) Differential effects of partial and complete loss of TREM2 on microglial injury response and tauopathy.; Proc Natl Acad Sci U S A, 115: 10172-10177 |
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GSE118630.2 GSE118630.1 |
| Sayed, Faten A et al. (2021) AD-linked R47H-TREM2mutation induces disease-enhancing microglial states via AKT hyperactivation.; Sci Transl Med, 13: eabe3947 |
|
GSE136389 |
| Sayi, Ayca et al. (2009) The CD4+ T cell-mediated IFN-gamma response to Helicobacter infection is essential for clearance and determines gastric cancer risk.; J Immunol, 182: 7085-101 |
|
GSE13873 |
| Sayin, Volkan I et al. (2014) Antioxidants accelerate lung cancer progression in mice.; Sci Transl Med, 6: 221ra15 |
|
GSE52594 |
| Sbirkov, Yordan et al. (2023) Targeting Glutaminolysis Shows Efficacy in Both Prednisolone-Sensitive and in Metabolically Rewired Prednisolone-Resistant B-Cell Childhood Acute Lymphoblastic Leukaemia Cells.; Int J Mol Sci, 24: [no pages] |
|
GSE217428 |
| Scaber, Jakub et al. (2024) Cellular and axonal transport phenotypes due to the C9ORF72 HRE in iPSC motor and sensory neurons.; Stem Cell Reports, 19: 957-972 |
|
GSE262929 |
| Scaglione, Antonella et al. (2018) PRMT5-mediated regulation of developmental myelination.; Nat Commun, 9: 2840 |
|
GSE94067 |
| Scagliotti, Valeria et al. (2021) Dynamic Expression of Imprinted Genes in the Developing and Postnatal Pituitary Gland.; Genes (Basel), 12: [no pages] |
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GSE171060 GSE169597 |
| Scala, Federico et al. (2019) Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas.; Nat Commun, 10: 4174 |
|
GSE134378 |
| Scandaglia, Marilyn et al. (2017) Loss of Kdm5c Causes Spurious Transcription and Prevents the Fine-Tuning of Activity-Regulated Enhancers in Neurons.; Cell Rep, 21: 47-59 |
|
GSE85874 |
| Scantamburlo, Francesca et al. (2025) TRAP1 expression elicits pro-tumoral functions in macrophages associated to malignant peripheral nerve sheath tumor cells.; J Exp Clin Cancer Res, 44: 257 |
|
GSE293735 |
| Scarpa, Joseph R et al. (2018) Cross-species systems analysis identifies gene networks differentially altered by sleep loss and depression.; Sci Adv, 4: eaat1294 |
|
GSE109112 |
| Scarpitti, MaKenzie R et al. (2024) Characterization of ribosome stalling and no-go mRNA decay stimulated by the fragile X protein, FMRP.; J Biol Chem, 300: 107540 |
|
GSE254586 |
| Scaruffi, Paola et al. (2012) Bone marrow of neuroblastoma patients shows downregulation of CXCL12 expression and presence of IFN signature.; Pediatr Blood Cancer, 59: 44-51 |
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GSE25624 |
| Scasny, Anna et al. (2025) Pneumococcal H2O2Reshapes Mitochondrial Function and Reprograms Host Cell Metabolism.; bioRxiv, [no vol.]: [no pages] |
|
GSE301606 |
| Scekic-Zahirovic, Jelena et al. (2016) Toxic gain of function from mutant FUS protein is crucial to trigger cell autonomous motor neuron loss.; EMBO J, 35: 1077-97 |
|
GSE78730 |
| Scekic-Zahirovic, Jelena et al. (2021) Cytoplasmic FUS triggers early behavioral alterations linked to cortical neuronal hyperactivity and inhibitory synaptic defects.; Nat Commun, 12: 3028 |
|
GSE166615 |
| Schaefer, Anne et al. (2009) Control of cognition and adaptive behavior by the GLP/G9a epigenetic suppressor complex.; Neuron, 64: 678-91 |
|
GSE19402 |
| Schaeffer, Julia et al. (2023) Customization of the translational complex regulates mRNA-specific translation to control CNS regeneration.; Neuron, 111: 2881-2898.e12 |
|
GSE209946 |
| Schafer, Marissa J et al. (2015) Calorie Restriction Suppresses Age-Dependent Hippocampal Transcriptional Signatures.; PLoS One, 10: e0133923 |
|
GSE69952 |
| Schaffenrath, Johanna et al. (2021) Characterization of the blood-brain barrier in genetically diverse laboratory mouse strains.; Fluids Barriers CNS, 18: 34 |
|
GSE173793 |
| Schaffer, Ashleigh E et al. (2018) Biallelic loss of human CTNNA2, encoding αN-catenin, leads to ARP2/3 complex overactivity and disordered cortical neuronal migration.; Nat Genet, 50: 1093-1101 |
|
GSE72994 |
| Schafflick, David et al. (2020) Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis.; Nat Commun, 11: 247 |
|
GSE141797 |
| Schalbetter, Sina M et al. (2022) Adolescence is a sensitive period for prefrontal microglia to act on cognitive development.; Sci Adv, 8: eabi6672 |
|
GSE168268 |
| Schaller, Sébastien et al. (2017) Novel combinatorial screening identifies neurotrophic factors for selective classes of motor neurons.; Proc Natl Acad Sci U S A, 114: E2486-E2493 |
|
GSE86478 |
| Schaniel, Christoph et al. (2021) A library of induced pluripotent stem cells from clinically well-characterized, diverse healthy human individuals.; Stem Cell Reports, 16: 3036-3049 |
|
GSE217423 |
| Schaschkow, Anaïs et al. (2021) STAT3 Regulates Mitochondrial Gene Expression in Pancreatic β-Cells and Its Deficiency Induces Glucose Intolerance in Obesity.; Diabetes, 70: 2026-2041 |
|
GSE162837 |
| Schaukowitch, Katie et al. (2017) An Intrinsic Transcriptional Program Underlying Synaptic Scaling during Activity Suppression.; Cell Rep, 18: 1512-1526 |
|
GSE90988 |
| Scheckel, Claudia et al. (2016) Regulatory consequences of neuronal ELAV-like protein binding to coding and non-coding RNAs in human brain.; Elife, 5: [no pages] |
|
GSE53698 GSE53697 |
| Scheetz, Todd E et al. (2006) Regulation of gene expression in the mammalian eye and its relevance to eye disease.; Proc Natl Acad Sci U S A, 103: 14429-34 |
|
GSE5680 |
| Scheffer, Déborah I et al. (2015) Gene Expression by Mouse Inner Ear Hair Cells during Development.; J Neurosci, 35: 6366-80 |
|
GSE60019 |
| Scheiblich, Hannah et al. (2021) Microglia jointly degrade fibrillar alpha-synuclein cargo by distribution through tunneling nanotubes.; Cell, 184: 5089-5106.e21 |
|
GSE152100 GSE209971 GSE209970 GSE166127 |
| Scheibye-Knudsen, Morten et al. (2014) A high-fat diet and NAD(+) activate Sirt1 to rescue premature aging in cockayne syndrome.; Cell Metab, 20: 840-855 |
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GSE62194.1 GSE62194.2 |
| Scheidegger, Adam et al. (2019) Genome-wide RNA pol II initiation and pausing in neural progenitors of the rat.; BMC Genomics, 20: 477 |
|
GSE130338 |
| Schäffner, Iris et al. (2022) Differential vulnerability of adult neurogenic niches to dosage of the neurodevelopmental-disorder linked gene Foxg1.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE185315 |