List of all 21,865 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Susco, Sara G et al. (2022) Molecular convergence between Down syndrome and fragile X syndrome identified using human pluripotent stem cell models.; Cell Rep, 40: 111312 |
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GSE144857 |
| Suslov, Oleg et al. (2015) Application of an RNA amplification method for reliable single-cell transcriptome analysis.; Biotechniques, 59: 137-48 |
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GSE55137 |
| Suspène, Rodolphe et al. (2024) Disruption of deoxyribonucleotide triphosphate biosynthesis leads to RAS proto-oncogene activation and perturbation of mitochondrial metabolism.; J Biol Chem, 301: 108117 |
|
GSE261895 |
| Suter, Thomas et al. (2025) Ligand-specific regulation of a binary enhancer code dictating cellular senescence.; Proc Natl Acad Sci U S A, 122: e2506321122 |
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GSE146578 |
| Suthapot, Praewa et al. (2022) The RNA helicases DDX5 and DDX17 facilitate neural differentiation of human pluripotent stem cells NTERA2.; Life Sci, 291: 120298 |
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GSE173292 |
| Suthar, Mehul S et al. (2013) A systems biology approach reveals that tissue tropism to West Nile virus is regulated by antiviral genes and innate immune cellular processes.; PLoS Pathog, 9: e1003168 |
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GSE39259 |
| Sutherland, Allison et al. (2011) Development and validation of a novel molecular biomarker diagnostic test for the early detection of sepsis.; Crit Care, 15: R149 |
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GSE28750 |
| Sutherland, Greg T et al. (2014) Comorbidities, confounders, and the white matter transcriptome in chronic alcoholism.; Alcohol Clin Exp Res, 38: 994-1001 |
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GSE53808 |
| Sutinen, Päivi et al. (2014) SUMOylation modulates the transcriptional activity of androgen receptor in a target gene and pathway selective manner.; Nucleic Acids Res, 42: 8310-9 |
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GSE54104 GSE54137 |
| Sutton, Gavin J et al. (2022) Comprehensive evaluation of deconvolution methods for human brain gene expression.; Nat Commun, 13: 1358 |
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GSE175772 |
| Suzich, Jon B et al. (2021) PML-NB-dependent type I interferon memory results in a restricted form of HSV latency.; EMBO Rep, [no vol.]: e52547 |
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GSE166738 |
| Suzuki, Hitoshi et al. (2011) Comprehensive analysis of alternative splicing and functionality in neuronal differentiation of P19 cells.; PLoS One, 6: e16880 |
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GSE23710 |
| Suzuki, Jun et al. (2023) Fatty acid binding protein type 7 deficiency preserves auditory function in noise-exposed mice.; Sci Rep, 13: 21494 |
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GSE241529 |
| Suzuki, Katsushi et al. (2020) Bach1 promotes muscle regeneration through repressing Smad-mediated inhibition of myoblast differentiation.; PLoS One, 15: e0236781 |
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GSE155097 |
| Suzuki, Keiichiro et al. (2010) The sensing of environmental stimuli by follicular dendritic cells promotes immunoglobulin A generation in the gut.; Immunity, 33: 71-83 |
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GSE19401 |
| Suzuki, Ryo et al. (2010) Diabetes and insulin in regulation of brain cholesterol metabolism.; Cell Metab, 12: 567-79 |
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GSE62013 |
| Suzuki, Takafumi et al. (2020) Nrf2 contributes to the weight gain of mice during space travel.; Commun Biol, 3: 496 |
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GSE152382 |
| Suzuki, Takahiro et al. (2011) Reconstruction of monocyte transcriptional regulatory network accompanies monocytic functions in human fibroblasts.; PLoS One, 7: e33474 |
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GSE27304 |
| Suzuki, Tamami et al. (2022) Manipulating histone acetylation leads to antitumor effects in hemangiosarcoma cells.; Vet Comp Oncol, 20: 805-816 |
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GSE200106 |
| Suzuki, Toru et al. (2016) Mice produced by mitotic reprogramming of sperm injected into haploid parthenogenotes.; Nat Commun, 7: 12676 |
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GSE60595 |
| Suzzi, Stefano et al. (2023) N-acetylneuraminic acid links immune exhaustion and accelerated memory deficit in diet-induced obese Alzheimer's disease mouse model.; Nat Commun, 14: 1293 |
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GSE198835.2 GSE198144 |
| Sveen, Anita et al. (2012) ColoGuidePro: a prognostic 7-gene expression signature for stage III colorectal cancer patients.; Clin Cancer Res, 18: 6001-10 |
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GSE30378 |
| Sveidahl Johansen, Olivia et al. (2021) Lipolysis drives expression of the constitutively active receptor GPR3 to induce adipose thermogenesis.; Cell, 184: 3502-3518.e33 |
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GSE173386.1 GSE173404 GSE173389 GSE173386.2 GSE173388 |
| Svensson, Charlotte et al. (2013) REST mediates androgen receptor actions on gene repression and predicts early recurrence of prostate cancer.; Nucleic Acids Res, 42: 999-1015 |
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GSE51461 |
| Svoboda, Devon S et al. (2019) Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain.; Proc Natl Acad Sci U S A, 116: 25293-25303 |
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GSE139192 |
| Svoboda, Laurie K et al. (2014) Overexpression of HOX genes is prevalent in Ewing sarcoma and is associated with altered epigenetic regulation of developmental transcription programs.; Epigenetics, 9: 1613-25 |
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GSE68898 |
| Swahari, Vijay et al. (2021) MicroRNA-29 is an essential regulator of brain maturation through regulation of CH methylation.; Cell Rep, 35: 108946 |
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GSE140163.1 GSE140163.2 |
| Swahari, Vijay et al. (2024) miR-29 is an important driver of aging-related phenotypes.; Commun Biol, 7: 1055 |
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GSE107763 |
| Swales, Nathalie et al. (2012) Plasticity of adult human pancreatic duct cells by neurogenin3-mediated reprogramming.; PLoS One, 7: e37055 |
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GSE30802 |
| Swaminathan, Jyothishmathi et al. (2022) Cross-Talk Between Histone Methyltransferases and Demethylases Regulate REST Transcription During Neurogenesis.; Front Oncol, 12: 855167 |
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GSE196548 |
| Swaminathan, Srividya et al. (2013) BACH2 mediates negative selection and p53-dependent tumor suppression at the pre-B cell receptor checkpoint.; Nat Med, 19: 1014-22 |
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GSE41042 |
| Swamy, Mahima et al. (2015) Intestinal intraepithelial lymphocyte activation promotes innate antiviral resistance.; Nat Commun, 6: 7090 |
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GSE63364 |
| Swan, Caroline et al. (2013) Identifying and testing candidate genetic polymorphisms in the irritable bowel syndrome (IBS): association with TNFSF15 and TNF?.; Gut, [no vol.]: [no pages] |
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GSE36701 |
| Swanson, Joseph M et al. (2012) Developing a gene expression model for predicting ventilator-associated pneumonia in trauma patients: a pilot study.; PLoS One, 7: e42065 |
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GSE30385 |
| Swartling, Fredrik J et al. (2012) Distinct neural stem cell populations give rise to disparate brain tumors in response to N-MYC.; Cancer Cell, 21: 601-13 |
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GSE36594 |
| Swarup, Vivek et al. (2019) Identification of evolutionarily conserved gene networks mediating neurodegenerative dementia.; Nat Med, 25: 152-164 |
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GSE115206 GSE89580 GSE89981 GSE89979 GSE90693 GSE115205 |
| Sweeney, Mark et al. (2024) Interleukin 11 therapy causes acute left ventricular dysfunction.; Cardiovasc Res, 120: 2220-2235 |
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GSE240804 |
| Sweet-Cordero, Alejandro et al. (2005) An oncogenic KRAS2 expression signature identified by cross-species gene-expression analysis.; Nat Genet, 37: 48-55 |
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GSE49200 |
| Sweha, Stefan R et al. (2021) Epigenetically defined therapeutic targeting in H3.3G34R/V high-grade gliomas.; Sci Transl Med, 13: eabf7860 |
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GSE161288 |
| Swierzy, Izabela J et al. (2017) Divergent co-transcriptomes of different host cells infected with Toxoplasma gondii reveal cell type-specific host-parasite interactions.; Sci Rep, 7: 7229 |
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GSE94595 |
| Swift, Steven M et al. (2008) Differential coupling of Arg- and Gly389 polymorphic forms of the beta1-adrenergic receptor leads to pathogenic cardiac gene regulatory programs.; Physiol Genomics, 35: 123-31 |
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GSE11887 |
| Swilley, Cody et al. (2022) Sex linked behavioral and hippocampal transcriptomic changes in mice with cell-type specificEgr1loss.; Front Neurosci, 17: 1240209 |
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GSE232396 |
| Swilley, Cody et al. (2023) Sex-Linked Growth Disorder and Aberrant Pituitary Gene Expression in Nestin-Cre-MediatedEgr1Conditional Knockout Mice.; Biology (Basel), 12: [no pages] |
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GSE217927 |
| Swindell, William R et al. (2011) Genome-wide expression profiling of five mouse models identifies similarities and differences with human psoriasis.; PLoS One, 6: e18266 |
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GSE27628 |
| Swindell, William R et al. (2012) Heterogeneity of inflammatory and cytokine networks in chronic plaque psoriasis.; PLoS One, 7: e34594 |
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GSE36287 |
| Swindell, William R et al. (2012) Meta-profiles of gene expression during aging: limited similarities between mouse and human and an unexpectedly decreased inflammatory signature.; PLoS One, 7: e33204 |
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GSE35322 |
| Swindell, William R et al. (2018) GM604 regulates developmental neurogenesis pathways and the expression of genes associated with amyotrophic lateral sclerosis.; Transl Neurodegener, 7: 30 |
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GSE114510 |
| Swindell, William R et al. (2022) Transcriptomic Analysis of Fumarate Compounds Identifies Unique Effects of Isosorbide Di-(Methyl Fumarate) on NRF2, NF-kappaB and IRF1 Pathway Genes.; Pharmaceuticals (Basel), 15: [no pages] |
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GSE200539 |
| Swindell, William R et al. (2023) Bakuchiol and Ethyl (Linoleate/Oleate) Synergistically Modulate Endocannabinoid Tone in Keratinocytes and Repress Inflammatory Pathway mRNAs.; JID Innov, 3: 100178 |
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GSE216614 |
| Swirski, Filip K et al. (2009) Identification of splenic reservoir monocytes and their deployment to inflammatory sites.; Science, 325: 612-6 |
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GSE14850 |
| Swisa, Avital et al. (2017) PAX6 maintains β cell identity by repressing genes of alternative islet cell types.; J Clin Invest, 127: 230-243 |
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GSE87530.1 |
| Swissa, Evyatar et al. (2024) Cortical plasticity is associated with blood-brain barrier modulation.; Elife, 12: [no pages] |
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GSE223282 |
| Swärd, Karl et al. (2013) Elevated pulmonary arterial pressure and altered expression of Ddah1 and Arg1 in mice lacking cavin-1/PTRF.; Physiol Rep, 1: e00008 |
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GSE43561 |
| Syangtan, Deepsing et al. (2024) Heparan sulfate regulates the fate decisions of human pluripotent stem cells.; Stem Cell Reports, [no vol.]: 102384 |
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GSE272332 |
| Syc-Mazurek, Stephanie B et al. (2022) Transcriptional control of retinal ganglion cell death after axonal injury.; Cell Death Dis, 13: 244 |
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GSE168789 |
| Sykora, Peter et al. (2015) DNA polymerase ? deficiency leads to neurodegeneration and exacerbates Alzheimer disease phenotypes.; Nucleic Acids Res, 43: 943-59 |
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GSE60911 |
| Symeonides, Christos et al. (2024) Male autism spectrum disorder is linked to brain aromatase disruption by prenatal BPA in multimodal investigations and 10HDA ameliorates the related mouse phenotype.; Nat Commun, 15: 6367 |
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GSE266401 GSE266400 |
| Symmans, W Fraser et al. (2010) Genomic index of sensitivity to endocrine therapy for breast cancer.; J Clin Oncol, 28: 4111-9 |
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GSE17705 |
| Symula, Derek J et al. (2004) Functional annotation of mouse mutations in embryonic stem cells by use of expression profiling.; Mamm Genome, 15: 1-13 |
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GSE614 |
| Szabo, R et al. (2016) Passenger mutations and aberrant gene expression in congenic tissue plasminogen activator-deficient mouse strains.; J Thromb Haemost, 14: 1618-28 |
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GSE76093 |
| Szabolcsi, Viktoria et al. (2017) Parvalbumin-Neurons of the Ventrolateral Hypothalamic Parvafox Nucleus Receive a Glycinergic Input: A Gene-Microarray Study.; Front Mol Neurosci, 10: 8 |
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GSE92955 |
| Szabova, Ludmila et al. (2012) Perturbation of Rb, p53, and Brca1 or Brca2 cooperate in inducing metastatic serous epithelial ovarian cancer.; Cancer Res, 72: 4141-53 |
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GSE46169 |
| Szabova, Ludmila et al. (2014) Pathway-specific engineered mouse allograft models functionally recapitulate human serous epithelial ovarian cancer.; PLoS One, 9: e95649 |
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GSE51927 |
| Szalanczy, Alexandria M et al. (2023) Changes in environmental stress over COVID-19 pandemic likely contributed to failure to replicate adiposity phenotype associated withKrtcap3.; Physiol Genomics, 55: 452-467 |
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GSE236873 |
| Szanto, Attila et al. (2010) STAT6 transcription factor is a facilitator of the nuclear receptor PPAR?-regulated gene expression in macrophages and dendritic cells.; Immunity, 33: 699-712 |
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GSE25123 GSE16385 GSE25088 |
| Szasz, Theodora et al. (2009) Differential expression of pancreatitis-associated protein and thrombospondins in arterial versus venous tissues.; J Vasc Res, 46: 551-560 |
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GSE12255 |
| Szathmari, Alexandru et al. (2013) Molecular characterization of circumventricular organs and third ventricle ependyma in the rat: potential markers for periventricular tumors.; Neuropathology, 33: 17-29 |
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GSE35089 |
| Szczepaniak, Piotr et al. (2022) Breast cancer chemotherapy induces vascular dysfunction and hypertension through a NOX4-dependent mechanism.; J Clin Invest, 132: [no pages] |
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GSE202682 |
| Szczepanski, Aileen Patricia et al. (2020) ASXL3 bridges BRD4 to BAP1 complex and governs enhancer activity in small cell lung cancer.; Genome Med, 12: 63 |
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GSE145028.2 |
| Szczepanski, Aileen Patricia et al. (2022) POU2AF2/C11orf53 functions as a coactivator of POU2F3 by maintaining chromatin accessibility and enhancer activity.; Sci Adv, 8: eabq2403 |
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GSE197426 |
| Szegő, Éva M et al. (2025) Intermittent fasting reduces alpha-synuclein pathology and functional decline in a mouse model of Parkinson's disease.; Nat Commun, 16: 4470 |
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GSE252873 GSE252872 |
| Szeky, Balazs et al. (2024) Efficient derivation of functional astrocytes from human induced pluripotent stem cells (hiPSCs).; PLoS One, 19: e0313514 |
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GSE253372 |
| Szeto, Aydan C H et al. (2024) Mef2d potentiates type-2 immune responses and allergic lung inflammation.; Science, 384: eadl0370 |
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GSE242029 |
| Szewczyk, Barbara et al. (2025) Activation of polo-like kinase 1 correlates with selective motor neuron vulnerability in familial ALS.; Cell Rep, 44: 116113 |
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GSE272827 |
| Szigety, Katherine M et al. (2020) HDAC3 ensures stepwise epidermal stratification via NCoR/SMRT-reliant mechanisms independent of its histone deacetylase activity.; Genes Dev, 34: 973-988 |
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GSE137233 |
| Szołtysek, Katarzyna et al. (2018) RRAD, IL4I1, CDKN1A, and SERPINE1 genes are potentially co-regulated by NF-κB and p53 transcription factors in cells exposed to high doses of ionizing radiation.; BMC Genomics, 19: 813 |
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GSE110762 |
| Szpara, Moriah L et al. (2007) Analysis of gene expression during neurite outgrowth and regeneration.; BMC Neurosci, 8: 100 |
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GSE9739 GSE9738 |
| Széles, Lajos et al. (2009) 1,25-dihydroxyvitamin D3 is an autonomous regulator of the transcriptional changes leading to a tolerogenic dendritic cell phenotype.; J Immunol, 182: 2074-83 |
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GSE13762 |
| Széles, Lajos et al. (2010) Research resource: transcriptome profiling of genes regulated by RXR and its permissive and nonpermissive partners in differentiating monocyte-derived dendritic cells.; Mol Endocrinol, 24: 2218-31 |
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GSE23618 GSE23073 |
| Świtońska, Karolina et al. (2018) Identification of Altered Developmental Pathways in Human Juvenile HD iPSC With 71Q and 109Q Using Transcriptome Profiling.; Front Cell Neurosci, 12: 528 |
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GSE124664 |
| Šušnjar, Urša et al. (2022) Cell environment shapes TDP-43 function with implications in neuronal and muscle disease.; Commun Biol, 5: 314 |
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GSE171714 |
| Šuštić, Tonći et al. (2020) RUNX2/CBFB modulates the response to MEK inhibitors through activation of receptor tyrosine kinases in KRAS-mutant colorectal cancer.; Transl Oncol, 13: 201-211 |
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GSE139169 |