List of all 20,073 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Yao, Huanling et al. (2022) Inhibition of Netosis with PAD Inhibitor Attenuates Endotoxin Shock Induced Systemic Inflammation.; Int J Mol Sci, 23: [no pages] |
|
GSE203340 |
| Yao, L et al. (2017) Molecular Profiling of Human Induced Pluripotent Stem Cell-Derived Hypothalamic Neurones Provides Developmental Insights into Genetic Loci for Body Weight Regulation.; J Neuroendocrinol, 29: [no pages] |
|
GSE78789 |
| Yao, Mingze et al. (2018) PCGF5 is required for neural differentiation of embryonic stem cells.; Nat Commun, 9: 1463 |
|
GSE95127 |
| Yao, Mingze et al. (2023) Loss of Dip2b leads to abnormal neural differentiation from mESCs.; Stem Cell Res Ther, 14: 248 |
|
GSE232532 |
| Yao, Mylene W M et al. (2003) Gene expression profiling reveals progesterone-mediated cell cycle and immunoregulatory roles of Hoxa-10 in the preimplantation uterus.; Mol Endocrinol, 17: 610-27 |
|
GSE108 GSE106 |
| Yao, Ruiqing et al. (2014) Nuclear receptor-mediated alleviation of alcoholic fatty liver by polyphenols contained in alcoholic beverages.; PLoS One, 9: e87142 |
|
GSE52644 |
| Yao, Shi-Qi et al. (2023) Retinal transcriptome of neonatal mice after optic nerve injury.; PLoS One, 18: e0286344 |
|
GSE232373 |
| Yao, Shijie et al. (2025) TLR9/NF-κB-mediated dendritic cell activation by neutrophil extracellular traps drives pathogenesis in experimental cerebral malaria.; J Neuroinflammation, 22: 206 |
|
GSE295000 |
| Yao, Xiaosai et al. (2023) PBRM1-deficient PBAF complexes target aberrant genomic loci to activate the NF-κB pathway in clear cell renal cell carcinoma.; Nat Cell Biol, 25: 765-777 |
|
GSE222245 |
| Yao, Xuerui et al. (2023) Production of Highly Uniform Midbrain Organoids from Human Pluripotent Stem Cells.; Stem Cells Int, 2023: 3320211 |
|
GSE236375 |
| Yao, Yihong et al. (2008) Type I interferon: potential therapeutic target for psoriasis?; PLoS One, 3: e2737 |
|
GSE14905 |
| Yao, Yin et al. (2021) Cell type-specific and cross-population polygenic risk score analyses ofMIR137gene pathway in schizophrenia.; iScience, 24: 102785 |
|
GSE129017 |
| Yao, Yu et al. (2021) Molecular Mechanisms of Epileptic Encephalopathy Caused by KCNMA1 Loss-of-Function Mutations.; Front Pharmacol, 12: 775328 |
|
GSE191038 |
| Yao, Zizhen et al. (2014) DUX4-induced gene expression is the major molecular signature in FSHD skeletal muscle.; Hum Mol Genet, 23: 5342-52 |
|
GSE56787 |
| Yap, Chui-Sun et al. (2011) Kinetic profiling of the c-Myc transcriptome and bioinformatic analysis of repressed gene promoters.; Cell Cycle, 10: 2184-96 |
|
GSE20550 |
| Yap, Ee-Lynn et al. (2020) Bidirectional perisomatic inhibitory plasticity of a Fos neuronal network.; Nature, [no vol.]: [no pages] |
|
GSE158840 |
| Yap, Timothy A et al. (2012) AT13148 is a novel, oral multi-AGC kinase inhibitor with potent pharmacodynamic and antitumor activity.; Clin Cancer Res, 18: 3912-23 |
|
GSE38008 |
| Yap, Yann Wan et al. (2013) Gene expression profiling of rotenone-mediated cortical neuronal death: evidence for inhibition of ubiquitin-proteasome system and autophagy-lysosomal pathway, and dysfunction of mitochondrial and calcium signaling.; Neurochem Int, 62: 653-63 |
|
GSE22997 |
| Yarmishyn, Aliaksandr A et al. (2014) HOXD-AS1 is a novel lncRNA encoded in HOXD cluster and a marker of neuroblastoma progression revealed via integrative analysis of noncoding transcriptome.; BMC Genomics, 15 Suppl 9: S7 |
|
GSE40680 |
| Yasuda, Ken et al. (2020) Sex-specific differences in transcriptomic profiles and cellular characteristics of oligodendrocyte precursor cells.; Stem Cell Res, 46: 101866 |
|
GSE135709 |
| Yasuda, Masayuki et al. (2014) RNA sequence reveals mouse retinal transcriptome changes early after axonal injury.; PLoS One, 9: e93258 |
|
GSE55228 |
| Yasuoka, Akihito et al. (2022) Mastication stimuli enhance the learning ability of weaning-stage rats, altering the hippocampal neuron transcriptome and micromorphology.; Front Behav Neurosci, 16: 1006359 |
|
GSE210292 |
| Yau, Anthony C Y et al. (2022) Inflammation and neutrophil extracellular traps in cerebral cavernous malformation.; Cell Mol Life Sci, 79: 206 |
|
GSE246373 |
| Yau, Christina et al. (2008) Genes responsive to both oxidant stress and loss of estrogen receptor function identify a poor prognosis group of estrogen receptor positive primary breast cancers.; Breast Cancer Res, 10: R61 |
|
GSE8193 GSE10061 GSE7378 |
| Yauch, Robert L et al. (2008) A paracrine requirement for hedgehog signalling in cancer.; Nature, 455: 406-10 |
|
GSE11981.1 GSE11981.2 |
| Yauk, Carole L et al. (2012) Genetic toxicology and toxicogenomic analysis of three cigarette smoke condensates in vitro reveals few differences among full-flavor, blonde, and light products.; Environ Mol Mutagen, 53: 281-96 |
|
GSE30079 |
| Yauk, Carole L et al. (2016) Application of the TGx-28.65 transcriptomic biomarker to classify genotoxic and non-genotoxic chemicals in human TK6 cells in the presence of rat liver S9.; Environ Mol Mutagen, 57: 243-60 |
|
GSE74216 |
| Yavari, Arash et al. (2016) Chronic Activation of ?2 AMPK Induces Obesity and Reduces ? Cell Function.; Cell Metab, 23: 821-36 |
|
GSE73436 |
| Yazdani, Neema et al. (2016) Striatal transcriptome analysis of a congenic mouse line (chromosome 11: 50-60Mb) exhibiting reduced methamphetamine sensitivity.; Genom Data, 8: 77-80 |
|
GSE66366 |
| Yazdi, Puya G et al. (2013) Differential gene expression reveals mitochondrial dysfunction in an imprinting center deletion mouse model of Prader-Willi syndrome.; Clin Transl Sci, 6: 347-55 |
|
GSE41759 |
| Ydens, Elke et al. (2020) Profiling peripheral nerve macrophages reveals two macrophage subsets with distinct localization, transcriptome and response to injury.; Nat Neurosci, 23: 676-689 |
|
GSE144705 GSE144702 |
| Ye, Fei et al. (2013) Protective properties of radio-chemoresistant glioblastoma stem cell clones are associated with metabolic adaptation to reduced glucose dependence.; PLoS One, 8: e80397 |
|
GSE46531 |
| Ye, Hui et al. (2008) Transcriptomic dissection of tongue squamous cell carcinoma.; BMC Genomics, 9: 69 |
|
GSE9844 |
| Ye, Junping et al. (2023) Transition of allele-specific DNA hydroxymethylation at regulatory loci is associated with phenotypic variation in monozygotic twins discordant for psychiatric disorders.; BMC Med, 21: 491 |
|
GSE246593 |
| Ye, Junqing et al. (2016) Pluripotent stem cells induced from mouse neural stem cells and small intestinal epithelial cells by small molecule compounds.; Cell Res, 26: 34-45 |
|
GSE75522 |
| Ye, Lingying et al. (2016) TCR usage, gene expression and function of two distinct FOXP3(+)Treg subsets within CD4(+)CD25(hi) T cells identified by expression of CD39 and CD45RO.; Immunol Cell Biol, 94: 293-305 |
|
GSE47667 |
| Ye, Longyun et al. (2020) A critical role for c-Myc in group 2 innate lymphoid cell activation.; Allergy, 75: 841-852 |
|
GSE129309 |
| Ye, Min et al. (2013) C/EBPa controls acquisition and maintenance of adult haematopoietic stem cell quiescence.; Nat Cell Biol, 15: 385-94 |
|
GSE42234 |
| Ye, Ping et al. (2007) G-protein-coupled receptors in aldosterone-producing adenomas: a potential cause of hyperaldosteronism.; J Endocrinol, 195: 39-48 |
|
GSE8514 |
| Ye, Qing et al. (2021) SARS-CoV-2 infection in the mouse olfactory system.; Cell Discov, 7: 49 |
|
GSE173186 |
| Ye, Siyang et al. (2024) YAP1 preserves tubular mitochondrial quality control to mitigate diabetic kidney disease.; Redox Biol, 78: 103435 |
|
GSE256447 |
| Ye, Tao et al. (2021) Efficient manipulation of gene dosage in human iPSCs using CRISPR/Cas9 nickases.; Commun Biol, 4: 195 |
|
GSE160224 |
| Ye, Xin et al. (2009) Norrin, frizzled-4, and Lrp5 signaling in endothelial cells controls a genetic program for retinal vascularization.; Cell, 139: 285-98 |
|
GSE16703 GSE16707 GSE16691 GSE16705 |
| Ye, Yizhou et al. (2013) Dysfunctional co-expression network analysis of familial hypercholesterolemia.; J Cardiol, 62: 58-62 |
|
GSE6088 |
| Yeh, Chien-Fu et al. (2023) Antipsychotic drug trifluoperazine as a potential therapeutic agent against nasopharyngeal carcinoma.; Head Neck, 45: 316-328 |
|
GSE192860 |
| Yeh, Chung-Min et al. (2016) Epigenetic silencing of the NR4A3 tumor suppressor, by aberrant JAK/STAT signaling, predicts prognosis in gastric cancer.; Sci Rep, 6: 31690 |
|
GSE78714 |
| Yeh, Kwo-yih et al. (2011) Hypoxia-inducible factor-2? and iron absorptive gene expression in Belgrade rat intestine.; Am J Physiol Gastrointest Liver Physiol, 301: G82-90 |
|
GSE7970 |
| Yeh, Yung-Hsin et al. (2013) Region-specific gene expression profiles in the left atria of patients with valvular atrial fibrillation.; Heart Rhythm, 10: 383-91 |
|
GSE41177 |
| Yelagandula, Ramesh et al. (2023) ZFP462 safeguards neural lineage specification by targeting G9A/GLP-mediated heterochromatin to silence enhancers.; Nat Cell Biol, 25: 42-55 |
|
GSE176321 |
| Yellajoshyula, Dhananjay et al. (2011) Geminin promotes neural fate acquisition of embryonic stem cells by maintaining chromatin in an accessible and hyperacetylated state.; Proc Natl Acad Sci U S A, 108: 3294-9 |
|
GSE25737 |
| Yellajoshyula, Dhananjay et al. (2012) Geminin regulates the transcriptional and epigenetic status of neuronal fate-promoting genes during mammalian neurogenesis.; Mol Cell Biol, 32: 4549-60 |
|
GSE39657 |
| Yellajoshyula, Dhananjay et al. (2017) The DYT6 Dystonia Protein THAP1 Regulates Myelination within the Oligodendrocyte Lineage.; Dev Cell, 42: 52-67.e4 |
|
GSE97372 |
| Yellajoshyula, Dhananjay et al. (2021) THAP1 modulates oligodendrocyte maturation by regulating ECM degradation in lysosomes.; Proc Natl Acad Sci U S A, 118: [no pages] |
|
GSE161556 |
| Yen, Ya-Ping et al. (2018) Dlk1-Dio3locus-derived lncRNAs perpetuate postmitotic motor neuron cell fate and subtype identity.; Elife, 7: [no pages] |
|
GSE114228 |
| Yen, Ya-Ping et al. (2025) The motor neuron m6A repertoire governs neuronal homeostasis and FTO inhibition mitigates ALS symptom manifestation.; Nat Commun, 16: 4063 |
|
GSE290244 |
| Yenerall, Paul et al. (2023) Use of the dTAG system in vivo to degrade CDK2 and CDK5 in adult mice and explore potential safety liabilities.; Toxicol Sci, 194: 53-69 |
|
GSE226386 GSE226388 |
| Yeo, Alan T et al. (2022) Single-cell RNA sequencing reveals evolution of immune landscape during glioblastoma progression.; Nat Immunol, 23: 971-984 |
|
GSE196174 |
| Yeo, Calvin W S et al. (2012) Parkin pathway activation mitigates glioma cell proliferation and predicts patient survival.; Cancer Res, 72: 2543-53 |
|
GSE29494 |
| Yeo, Sujung et al. (2015) Neuroprotective changes in degeneration-related gene expression in the substantia nigra following acupuncture in an MPTP mouse model of Parkinsonism: Microarray analysis.; Genet Mol Biol, 38: 115-27 |
|
GSE48293 |
| Yeoh, Eng-Juh et al. (2002) Classification, subtype discovery, and prediction of outcome in pediatric acute lymphoblastic leukemia by gene expression profiling.; Cancer Cell, 1: 133-43 |
|
yeoh-leukemia |
| Yeom, Kyu-Hyeon et al. (2021) Tracking pre-mRNA maturation across subcellular compartments identifies developmental gene regulation through intron retention and nuclear anchoring.; Genome Res, [no vol.]: [no pages] |
|
GSE159944 GSE159990.1 GSE159919 |
| Yeon, Gyu-Bum et al. (2021) NFIB induces functional astrocytes from human pluripotent stem cell-derived neural precursor cells mimicking in vivo astrogliogenesis.; J Cell Physiol, [no vol.]: [no pages] |
|
GSE157768 GSE203345 |
| Yeung, Frank et al. (2013) Nontelomeric role for Rap1 in regulating metabolism and protecting against obesity.; Cell Rep, 3: 1847-56 |
|
GSE46209 |
| Yi, Dazhuang et al. (2021) Alteration ofN6-Methyladenosine mRNA Methylation in a Rat Model of Cerebral Ischemia-Reperfusion Injury.; Front Neurosci, 15: 605654 |
|
GSE163614 |
| Yi, Sang-Hoon et al. (2014) Foxa2 acts as a co-activator potentiating expression of the Nurr1-induced DA phenotype via epigenetic regulation.; Development, 141: 761-72 |
|
GSE54086 |
| Yi, Siqi et al. (2020) E2A regulates neural ectoderm fate specification in human embryonic stem cells.; Development, 147: [no pages] |
|
GSE154625 |
| Yi, Yong et al. (2013) The functional impairment of HCC-infiltrating ?? T cells, partially mediated by regulatory T cells in a TGF?- and IL-10-dependent manner.; J Hepatol, 58: 977-83 |
|
GSE38476 |
| Yi, Yongjun et al. (2024) Conversion of glioma cells into neuron-like cells by small molecules.; iScience, 27: 111091 |
|
GSE262741 |
| Yi, Zhenghui et al. (2012) Blood-based gene expression profiles models for classification of subsyndromal symptomatic depression and major depressive disorder.; PLoS One, 7: e31283 |
|
GSE32280 |
| Yildirim, Eda et al. (2013) Xist RNA is a potent suppressor of hematologic cancer in mice.; Cell, 152: 727-42 |
|
GSE43961 |
| Yildirim, Ferah et al. (2019) Early epigenomic and transcriptional changes reveal Elk-1 transcription factor as a therapeutic target in Huntington's disease.; Proc Natl Acad Sci U S A, 116: 24840-24851 |
|
GSE140118 |
| Yildirim, Ozlem et al. (2011) Mbd3/NURD complex regulates expression of 5-hydroxymethylcytosine marked genes in embryonic stem cells.; Cell, 147: 1498-510 |
|
GSE31008 |
| Yildiz, Gokhan et al. (2013) Genome-wide transcriptional reorganization associated with senescence-to-immortality switch during human hepatocellular carcinogenesis.; PLoS One, 8: e64016 |
|
GSE17548 GSE17546 |
| Yilmaz, Atilgan et al. (2018) Defining essential genes for human pluripotent stem cells by CRISPR-Cas9 screening in haploid cells.; Nat Cell Biol, 20: 610-619 |
|
GSE103846 |
| Yilmaz, Melis et al. (2021) Overexpression of schizophrenia susceptibility factor human complement C4A promotes excessive synaptic loss and behavioral changes in mice.; Nat Neurosci, 24: 214-224 |
|
GSE161557 |
| Yim, Aldrin K Y et al. (2022) Disentangling glial diversity in peripheral nerves at single-nuclei resolution.; Nat Neurosci, 25: 238-251 |
|
GSE181858 |
| Yim, Annie et al. (2020) mitoXplorer, a visual data mining platform to systematically analyze and visualize mitochondrial expression dynamics and mutations.; Nucleic Acids Res, 48: 605-632 |
|
GSE131249 |
| Yim, Christina Y et al. (2016) G0S2 Suppresses Oncogenic Transformation by Repressing a MYC-Regulated Transcriptional Program.; Cancer Res, 76: 1204-13 |
|
GSE74696 |
| Yim, Kristina M et al. (2024) Cell type-specific dysregulation of gene expression due toChd8haploinsufficiency during mouse cortical development.; bioRxiv, [no vol.]: [no pages] |
|
GSE273270 GSE273765 |
| Yin, Amelia et al. (2024) Chronic hypoxia impairs skeletal muscle repair via HIF-2α stabilization.; J Cachexia Sarcopenia Muscle, 15: 631-645 |
|
GSE243799 |
| Yin, Changjun et al. (2019) ApoE attenuates unresolvable inflammation by complex formation with activated C1q.; Nat Med, 25: 496-506 |
|
GSE85775 GSE85774 |
| Yin, Gang et al. (2022) Upregulated lncARAT in Schwann cells promotes axonal regeneration by recruiting and activating proregenerative macrophages.; Mol Med, 28: 76 |
|
GSE149657 |
| Yin, Kathleen et al. (2016) Neuronal cell lines as model dorsal root ganglion neurons: A transcriptomic comparison.; Mol Pain, 12: [no pages] |
|
GSE75691 |
| Yin, Kelvin et al. (2022) Senescence-induced endothelial phenotypes underpin immune-mediated senescence surveillance.; Genes Dev, 36: 533-549 |
|
GSE171147 |
| Yin, Nuoya et al. (2019) Embryonic stem cell- and transcriptomics-based in vitro analyses reveal that bisphenols A, F and S have similar and very complex potential developmental toxicities.; Ecotoxicol Environ Saf, 176: 330-338 |
|
GSE120224 |