List of all 20,076 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Yang, Guangrui et al. (2016) Timing of expression of the core clock gene Bmal1 influences its effects on aging and survival.; Sci Transl Med, 8: 324ra16 |
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GSE70499 |
| Yang, Haimei et al. (2024) Transplantation of Wnt5a-modified Bone Marrow Mesenchymal Stem Cells Promotes Recovery After Spinal Cord Injury via the PI3K/AKT Pathway.; Mol Neurobiol, 61: 10830-10844 |
|
GSE296458 |
| Yang, Hansen et al. (2021) RNA-Seq analysis reveals critical transcriptome changes caused by sodium butyrate in DN mouse models.; Biosci Rep, 41: [no pages] |
|
GSE151325 |
| Yang, Haojun et al. (2024) Remodelling of the translatome controls diet and its impact on tumorigenesis.; Nature, 633: 189-197 |
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GSE232342 |
| Yang, Hongtian et al. (2019) Transcriptome profiling of brain myeloid cells revealed activation of Itgal, Trem1, and Spp1 in western diet-induced obesity.; J Neuroinflammation, 16: 169 |
|
GSE133814 |
| Yang, Hui et al. (2021) CPVL promotes glioma progression via STAT1 pathway inhibition through interactions with the BTK/p300 axis.; JCI Insight, 6: [no pages] |
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GSE188256 |
| Yang, Huiming et al. (2020) Truncation of mutant huntingtin in knock-in mice demonstrates exon1 huntingtin is a key pathogenic form.; Nat Commun, 11: 2582 |
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GSE145879 |
| Yang, Huiya et al. (2023) Rescue of GM3 synthase deficiency by spatially controlled, rAAV-mediated ST3GAL5 delivery.; JCI Insight, 8: [no pages] |
|
GSE201587 |
| Yang, Ivana V et al. (2012) The peripheral blood transcriptome identifies the presence and extent of disease in idiopathic pulmonary fibrosis.; PLoS One, 7: e37708 |
|
GSE33566 |
| Yang, Jason et al. (2025) Polyglycine-mediated aggregation of FAM98B disrupts tRNA processing in GGC repeat disorders.; Science, 389: eado2403 |
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GSE246377 |
| Yang, Jee Myung et al. (2020) Dll4 Suppresses Transcytosis for Arterial Blood-Retinal Barrier Homeostasis.; Circ Res, 126: 767-783 |
|
GSE142671 |
| Yang, Jennifer A et al. (2017) The Arcuate Estrogen-Regulated Transcriptome: Estrogen Response Element-Dependent and -Independent Signaling of ERα in Female Mice.; Endocrinology, 158: 612-626 |
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GSE86609 |
| Yang, Jia-Yao et al. (2025) GFAT1 promotes the progression of hepatocellular carcinoma via enhancing the O-GlcNAcylation of VEZF1.; Cell Death Dis, 16: 647 |
|
GSE278334 |
| Yang, Jianjing et al. (2024) SOXC Enhances NGN2-Mediated Reprogramming of Glioblastoma Cells Into Neuron-Like Cells by Modulating RhoA and RAC1/CDC42 Pathway Activity.; CNS Neurosci Ther, 30: e70075 |
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GSE112648 |
| Yang, Jie et al. (2017) Chronic nicotine differentially affects murine transcriptome profiling in isolated cortical interneurons and pyramidal neurons.; BMC Genomics, 18: 194 |
|
GSE89899 |
| Yang, Jie et al. (2019) Age- and Nicotine-Associated Gene Expression Changes in the Hippocampus of APP/PS1 Mice.; J Mol Neurosci, 69: 608-622 |
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GSE86828 |
| Yang, Jing et al. (2024) Maternal immune activation upregulates the AU020206-IRFs-STAT1 axis in modulating cytokine production in the brain.; Theranostics, 14: 5682-5697 |
|
GSE233424 |
| Yang, Jing et al. (2025) STK11 coordinates IL-4 signaling with metabolic reprogramming to control M2 macrophage polarization and antitumor immunity.; Sci Adv, 11: eadx5495 |
|
GSE228251 |
| Yang, Jinshou et al. (2023) Epigenetic reprogramming-induced guanidinoacetic acid synthesis promotes pancreatic cancer metastasis and transcription-activating histone modifications.; J Exp Clin Cancer Res, 42: 155 |
|
GSE193268 |
| Yang, Ju-Hee et al. (2023) Delta (B1.617.2) variant of SARS-CoV-2 induces severe neurotropic patterns in K18-hACE2 mice.; Sci Rep, 13: 3303 |
|
GSE214516 |
| Yang, Juan et al. (2020) Sirt6 promotes tumorigenesis and drug resistance of diffuse large B-cell lymphoma by mediating PI3K/Akt signaling.; J Exp Clin Cancer Res, 39: 142 |
|
GSE135914 |
| Yang, Jun et al. (2015) The role of histone demethylase KDM4B in Myc signaling in neuroblastoma.; J Natl Cancer Inst, 107: djv080 |
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GSE45967 |
| Yang, Jun et al. (2025) Creatine mitigates neurogenesis impairment caused by defective DcpS decapping.; Sci Rep, 15: 17915 |
|
GSE274722 |
| Yang, Kai et al. (2013) T cell exit from quiescence and differentiation into Th2 cells depend on Raptor-mTORC1-mediated metabolic reprogramming.; Immunity, 39: 1043-56 |
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GSE51668 |
| Yang, Kai-Chien et al. (2012) Combined deep microRNA and mRNA sequencing identifies protective transcriptomal signature of enhanced PI3K? signaling in cardiac hypertrophy.; J Mol Cell Cardiol, 53: 101-12 |
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GSE35350 |
| Yang, Kai-Chien et al. (2014) Deep RNA sequencing reveals dynamic regulation of myocardial noncoding RNAs in failing human heart and remodeling with mechanical circulatory support.; Circulation, 129: 1009-21 |
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GSE46224.2 |
| Yang, Kun et al. (2025) Autonomous STING signaling in Purkinje cells drives neurodegeneration independent of type I interferon.; Cell Rep, 44: 116480 |
|
GSE300185 |
| Yang, Li et al. (2011) Genomewide characterization of non-polyadenylated RNAs.; Genome Biol, 12: R16 |
|
GSE24399 |
| Yang, Li et al. (2020) Extracellular Vesicle-Mediated Delivery of Circular RNA SCMH1 Promotes Functional Recovery in Rodent and Nonhuman Primate Ischemic Stroke Models.; Circulation, 142: 556-574 |
|
GSE135121 |
| Yang, Liang et al. (2025) Stress dynamically modulates neuronal autophagy to gate depression onset.; Nature, [no vol.]: [no pages] |
|
GSE287175 |
| Yang, Liang-Yo et al. (2021) Exerting the Appropriate Application of Methylprednisolone in Acute Spinal Cord Injury Based on Time Course Transcriptomics Analysis.; Int J Mol Sci, 22: [no pages] |
|
GSE15878 |
| Yang, Lijun et al. (2024) Initial IL-10 production dominates the therapy of mesenchymal stem cell scaffold in spinal cord injury.; Theranostics, 14: 879-891 |
|
GSE240755 |
| Yang, Linlin et al. (2016) Covariation Analysis of Serumal and Urinary Metabolites Suggests Aberrant Glycine and Fatty Acid Metabolism in Chronic Hepatitis B.; PLoS One, 11: e0156166 |
|
GSE58208 |
| Yang, Liqin et al. (2022) Retinoic Acid Supplementation Rescues the Social Deficits inFmr1Knockout Mice.; Front Genet, 13: 928393 |
|
GSE201672 |
| Yang, Lu et al. (2011) Inflammatory gene expression in OVE26 diabetic kidney during the development of nephropathy.; Nephron Exp Nephrol, 119: e8-20 |
|
GSE20636 |
| Yang, Meng et al. (2024) Antibiotic-Induced Gut Microbiota Dysbiosis Modulates Host Transcriptome and m6A Epitranscriptome via Bile Acid Metabolism.; Adv Sci (Weinh), 11: e2307981 |
|
GSE216620 |
| Yang, Ming et al. (2021) Inhibition of mitochondrial function by metformin increases glucose uptake, glycolysis and GDF-15 release from intestinal cells.; Sci Rep, 11: 2529 |
|
GSE165122 |
| Yang, Muh-Hwa et al. (2010) Bmi1 is essential in Twist1-induced epithelial-mesenchymal transition.; Nat Cell Biol, 12: 982-92 |
|
GSE19406 |
| Yang, Nan et al. (2013) Generation of oligodendroglial cells by direct lineage conversion.; Nat Biotechnol, 31: 434-9 |
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GSE40421 |
| Yang, Nicole J et al. (2022) Anthrax toxins regulate pain signaling and can deliver molecular cargoes into ANTXR2+DRG sensory neurons.; Nat Neurosci, 25: 168-179 |
|
GSE184619 |
| Yang, Ning et al. (2023) Galectin-1-dependent ceRNA network in HRMECs revealed its association with retinal neovascularization.; BMC Genomics, 24: 327 |
|
GSE221037 |
| Yang, Peiwei et al. (2024) CAR T cells secreting NGF-neutralizing scFv enhance efficacy in clear cell renal cell carcinoma by relieving immunosuppression through immunosympathectomy.; J Immunother Cancer, 12: [no pages] |
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GSE279393 |
| Yang, Ping et al. (2004) DNA microarray analysis of gene expression in human optic nerve head astrocytes in response to hydrostatic pressure.; Physiol Genomics, 17: 157-69 |
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GSE758 |
| Yang, Qi et al. (2011) E47 regulates hematopoietic stem cell proliferation and energetics but not myeloid lineage restriction.; Blood, 117: 3529-38 |
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GSE26788 |
| Yang, Qianlan et al. (2024) LATS1/2 loss promote tumor immune evasion in endometrial cancer through downregulating MHC-I expression.; J Exp Clin Cancer Res, 43: 54 |
|
GSE241847 |
| Yang, Qing et al. (2023) Epigenetic and transcriptional landscapes during cerebral cortex development in a microcephaly mouse model.; J Genet Genomics, [no vol.]: [no pages] |
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GSE215228.1 |
| Yang, Ruojing et al. (2007) Liver-specific knockdown of JNK1 up-regulates proliferator-activated receptor gamma coactivator 1 beta and increases plasma triglyceride despite reduced glucose and insulin levels in diet-induced obese mice.; J Biol Chem, 282: 22765-74 |
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GSE7648 |
| Yang, S et al. (2007) Biochemical, molecular and behavioral phenotypes of Rab3A mutations in the mouse.; Genes Brain Behav, 6: 77-96 |
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GSE6527.1 GSE6527.2 |
| Yang, Scarlett Y et al. (2023) FBXW7β isoform drives transcriptional activation of the proinflammatory TNF cluster in human pro-B cells.; Blood Adv, 7: 1077-1091 |
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GSE212312 |
| Yang, Shouhui et al. (2022) Dysregulation of HNF1B/Clusterin axis enhances disease progression in a highly aggressive subset of pancreatic cancer patients.; Carcinogenesis, 43: 1198-1210 |
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GSE183795 |
| Yang, Shuzhang et al. (2007) Genome-wide expression profiling and bioinformatics analysis of diurnally regulated genes in the mouse prefrontal cortex.; Genome Biol, 8: R247 |
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GSE9471 |
| Yang, Shuzhang et al. (2009) Genomic landscape of a three-generation pedigree segregating affective disorder.; PLoS One, 4: e4474 |
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GSE11767 |
| Yang, Siyoung et al. (2015) Immune tolerance. Regulatory T cells generated early in life play a distinct role in maintaining self-tolerance.; Science, 348: 589-94 |
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GSE66332 |
| Yang, Su et al. (2018) Shortening the Half-Life of Cas9 Maintains Its Gene Editing Ability and Reduces Neuronal Toxicity.; Cell Rep, 25: 2653-2659.e3 |
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GSE122072 |
| Yang, Su et al. (2020) Lack of RAN-mediated toxicity in Huntington's disease knock-in mice.; Proc Natl Acad Sci U S A, 117: 4411-4417 |
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GSE142603 |
| Yang, T et al. (2019) Maresin 1 attenuates neuroinflammation in a mouse model of perioperative neurocognitive disorders.; Br J Anaesth, 122: 350-360 |
|
GSE115440 |
| Yang, Tianqi et al. (2022) Xist exerts gene-specific silencing during XCI maintenance and impacts lineage-specific cell differentiation and proliferation during hematopoiesis.; Nat Commun, 13: 4464 |
|
GSE184772 |
| Yang, Tianshu et al. (2023) The PRMT6/PARP1/CRL4B Complex Regulates the Circadian Clock and Promotes Breast Tumorigenesis.; Adv Sci (Weinh), 10: e2202737 |
|
GSE210948 |
| Yang, Ting et al. (2025) hPSC-derived sacral neural crest cells restore erectile function in pelvic ganglia injury.; Stem Cell Res Ther, 16: 593 |
|
GSE299758 |
| Yang, X et al. (2002) Microarray profiling of skeletal muscle tissues from equally obese, non-diabetic insulin-sensitive and insulin-resistant Pima Indians.; Diabetologia, 45: 1584-93 |
|
GSE121 |
| Yang, Xi et al. (2012) Identification of urinary microRNA profiles in rats that may diagnose hepatotoxicity.; Toxicol Sci, 125: 335-44 |
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GSE32891 |
| Yang, Xia et al. (2006) Tissue-specific expression and regulation of sexually dimorphic genes in mice.; Genome Res, 16: 995-1004 |
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GSE3088 GSE3087 |
| Yang, Xiang-Ping et al. (2011) Opposing regulation of the locus encoding IL-17 through direct, reciprocal actions of STAT3 and STAT5.; Nat Immunol, 12: 247-54 |
|
GSE26551 |
| Yang, Xianyuan et al. (2025) Discovery of a Novel Selective and Cell-Active N6-Methyladenosine RNA Demethylase ALKBH5 Inhibitor.; J Med Chem, 68: 4133-4147 |
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GSE255973 |
| Yang, Xiaojing et al. (2012) Gene reactivation by 5-aza-2'-deoxycytidine-induced demethylation requires SRCAP-mediated H2A.Z insertion to establish nucleosome depleted regions.; PLoS Genet, 8: e1002604 |
|
GSE26684 |
| Yang, Xiaoming et al. (2022) Changes of Gene Expression Patterns of Muscle Pathophysiology-Related Transcription Factors During Denervated Muscle Atrophy.; Front Physiol, 13: 923190 |
|
GSE201025 |
| Yang, Xiaoyang et al. (2019) Differentiation of human pluripotent stem cells into neurons or cortical organoids requires transcriptional co-regulation by UTX and 53BP1.; Nat Neurosci, 22: 362-373 |
|
GSE120333 |
| Yang, Xiaoyu et al. (2023) Functional characterization of Alzheimer's disease genetic variants in microglia.; Nat Genet, 55: 1735-1744 |
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GSE206478 |
| Yang, Ximing J et al. (2005) A molecular classification of papillary renal cell carcinoma.; Cancer Res, 65: 5628-37 |
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GSE2748 |
| Yang, Xin et al. (2017) 5-methylcytosine promotes mRNA export - NSUN2 as the methyltransferase and ALYREF as an m5C reader.; Cell Res, 27: 606-625 |
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GSE93750.1 GSE93750.2 |
| Yang, Xin et al. (2025) Astrocytic EphA4 signaling is important for the elimination of excitatory synapses in Alzheimer's disease.; Proc Natl Acad Sci U S A, 122: e2420324122 |
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GSE284797 |
| Yang, Xu et al. (2012) Selective requirement for Mediator MED23 in Ras-active lung cancer.; Proc Natl Acad Sci U S A, 109: E2813-22 |
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GSE40517 |
| Yang, Yaming et al. (2024) The chromodomain protein CDYL confers forebrain identity to human cortical organoids by inhibiting neuronatin.; Cell Rep, 43: 114814 |
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GSE276320.2 GSE247084.2 GSE276320.1 |
| Yang, Yaw-Ching et al. (2003) Hierarchical model of gene regulation by transforming growth factor beta.; Proc Natl Acad Sci U S A, 100: 10269-74 |
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GSE579 |
| Yang, Yawei J et al. (2012) Microcephaly gene links trithorax and REST/NRSF to control neural stem cell proliferation and differentiation.; Cell, 151: 1097-112 |
|
GSE36384 |
| Yang, Yeyoung et al. (2025) Blockade of TLR2 activation in macrophages by self-assembled hyaluronic acid nanoparticles alleviates psoriasis-like skin dermatitis.; Int J Biol Macromol, 323: 147202 |
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GSE276941 |
| Yang, Yibin et al. (2012) Exploiting synthetic lethality for the therapy of ABC diffuse large B cell lymphoma.; Cancer Cell, 21: 723-37 |
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GSE32456 |
| Yang, Yijun et al. (2024) Thyroid Hormone Suppresses Medulloblastoma Progression Through Promoting Terminal Differentiation of Tumor Cells.; bioRxiv, [no vol.]: [no pages] |
|
GSE224974 |
| Yang, Ying et al. (2023) SAPS3 subunit of protein phosphatase 6 is an AMPK inhibitor and controls metabolic homeostasis upon dietary challenge in male mice.; Nat Commun, 14: 1368 |
|
GSE210333 |
| Yang, Yini et al. (2020) The 3D genomic landscape of differential response to EGFR/HER2 inhibition in endocrine-resistant breast cancer cells.; Biochim Biophys Acta Gene Regul Mech, 1863: 194631 |
|
GSE144378 |
| Yang, Yongkang et al. (2022) HIF-1 Interacts with TRIM28 and DNA-PK to release paused RNA polymerase II and activate target gene transcription in response to hypoxia.; Nat Commun, 13: 316 |
|
GSE167956 |
| Yang, Yue et al. (2016) Chromatin remodeling inactivates activity genes and regulates neural coding.; Science, 353: 300-305 |
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GSE83253 |
| Yang, Yueli et al. (2024) VGLL1 cooperates with TEAD4 to control human trophectoderm lineage specification.; Nat Commun, 15: 583 |
|
GSE241813 |
| Yang, Yueqin et al. (2016) Determination of a Comprehensive Alternative Splicing Regulatory Network and Combinatorial Regulation by Key Factors during the Epithelial-to-Mesenchymal Transition.; Mol Cell Biol, 36: 1704-19 |
|
GSE75487 |
| Yang, Yunseon et al. (2022) Adeno-associated virus (AAV) 9-mediated gene delivery of Nurr1 and Foxa2 ameliorates symptoms and pathologies of Alzheimer disease model mice by suppressing neuro-inflammation and glial pathology.; Mol Psychiatry, [no vol.]: [no pages] |
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GSE201106.1 GSE201106.2 |
| Yang, Zhan et al. (2019) Dysregulation of p53-RBM25-mediated circAMOTL1L biogenesis contributes to prostate cancer progression through the circAMOTL1L-miR-193a-5p-Pcdha pathway.; Oncogene, 38: 2516-2532 |
|
GSE113179 |
| Yang, Zhaohui et al. (2017) Stromal hedgehog signaling maintains smooth muscle and hampers micro-invasive prostate cancer.; Dis Model Mech, 10: 39-52 |
|
GSE92301 |
| Yang, Zhengyan et al. (2024) DRD4 promotes chemo-resistance and cancer stem cell-like phenotypes by mediating the activation of the Akt/β-catenin signaling axis in liver cancer.; Br J Cancer, 131: 1212-1223 |
|
GSE272591 |
| Yang, Zhi-Hong et al. (2023) Dietary fish oil enriched in very-long-chain polyunsaturated fatty acid reduces cardiometabolic risk factors and improves retinal function.; iScience, 26: 108411 |
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GSE221559 |
| Yang, Zi-Mei et al. (2023) AFF4 globally affects the release of paused RNA polymerase II in HEL cells.; Yi Chuan, 45: 658-668 |
|
GSE234617 |
| Yao, Bing et al. (2017) DNA N6-methyladenine is dynamically regulated in the mouse brain following environmental stress.; Nat Commun, 8: 1122 |
|
GSE79543 |
| Yao, Changfu et al. (2021) Senescence of Alveolar Type 2 Cells Drives Progressive Pulmonary Fibrosis.; Am J Respir Crit Care Med, 203: 707-717 |
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GSE132909 |
| Yao, Changfu et al. (2023) Maladaptive TGF-β Signals to the Alveolar Epithelium Drive Fibrosis after COVID-19 Infection.; Am J Respir Crit Care Med, 208: 201-204 |
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GSE224955 |
| Yao, Cheng-Cheng et al. (2023) Accumulation of branched-chain amino acids reprograms glucose metabolism in CD8+T cells with enhanced effector function and anti-tumor response.; Cell Rep, 42: 112186 |
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GSE224250 |