List of all 20,073 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Zhang, Yongchun et al. (2023) Epigenetic regulation of p63 blocks squamous-to-neuroendocrine transdifferentiation in esophageal development and malignancy.; bioRxiv, [no vol.]: [no pages] |
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GSE242438 GSE242439 |
| Zhang, Yongchun et al. (2024) Epigenetic regulation of p63 blocks squamous-to-neuroendocrine transdifferentiation in esophageal development and malignancy.; Sci Adv, 10: eadq0479 |
|
GSE242463 |
| Zhang, Yongguang et al. (2023) MiR-9-1 controls osteoblastic regulation of lymphopoiesis.; Leukemia, 37: 2261-2275 |
|
GSE239376 |
| Zhang, Yonghua et al. (2008) Response of the adipose tissue transcriptome to dihydrotestosterone in mice.; Physiol Genomics, 35: 254-61 |
|
GSE9631 |
| Zhang, Youjia et al. (2022) TIPARP is involved in the regulation of intraocular pressure.; Commun Biol, 5: 1386 |
|
GSE218153 |
| Zhang, Youran R et al. (2024) Agonism of the glutamate receptor GluK2 suppresses dermal mast cell activation and cutaneous inflammation.; Sci Transl Med, 16: eadq9133 |
|
GSE268986 |
| Zhang, Yu et al. (2017) Patient iPSC-Derived Neurons for Disease Modeling of Frontotemporal Dementia with Mutation in CHMP2B.; Stem Cell Reports, 8: 648-658 |
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GSE92340 |
| Zhang, Yu et al. (2022) A transcriptomic analysis of neuropathic pain in the anterior cingulate cortex after nerve injury.; Bioengineered, 13: 2058-2075 |
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GSE175760 GSE172133 |
| Zhang, Yu et al. (2022) Redondoviridae infection regulates circRNAome in periodontitis.; J Med Virol, 94: 2537-2547 |
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GSE189022 |
| Zhang, Yuan et al. (2012) The starvation hormone, fibroblast growth factor-21, extends lifespan in mice.; Elife, 1: e00065 |
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GSE39313 |
| Zhang, Yuan et al. (2021) Transcriptional Network Analysis Reveals the Role of miR-223-5p During Diabetic Corneal Epithelial Regeneration.; Front Mol Biosci, 8: 737472 |
|
GSE180490 |
| Zhang, Yuan et al. (2022) Microglia-specific transcriptional repression of interferon-regulated genes after prolonged stress in mice.; Neurobiol Stress, 21: 100495 |
|
GSE186760 |
| Zhang, Yuan et al. (2023) Pushen capsule treatment promotes functional recovery after ischemic stroke.; Phytomedicine, 111: 154664 |
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GSE207034 |
| Zhang, Yuanyue et al. (2020) Depletion of NK Cells Improves Cognitive Function in the Alzheimer Disease Mouse Model.; J Immunol, 205: 502-510 |
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GSE142875 |
| Zhang, Yuanyue et al. (2025) MAIT cell deficiency exacerbates neuroinflammation in P301S human tau transgenic mice.; J Neuroinflammation, 22: 90 |
|
GSE285822 |
| Zhang, Yue et al. (2020) Cortical Neural Stem Cell Lineage Progression Is Regulated by Extrinsic Signaling Molecule Sonic Hedgehog.; Cell Rep, 30: 4490-4504.e4 |
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GSE138878 |
| Zhang, Yue et al. (2024) Arresting the bad seed: HDAC3 regulates proliferation of different microglia after ischemic stroke.; Sci Adv, 10: eade6900 |
|
GSE220042 |
| Zhang, Yue-Zheng et al. (2011) Discovery and validation of prognostic markers in gastric cancer by genome-wide expression profiling.; World J Gastroenterol, 17: 1710-7 |
|
GSE21983 |
| Zhang, Yueqi et al. (2023) Hyperpolarization-activated cyclic nucleotide-gated cation channel 3 promotes HCC development in a female-biased manner.; Cell Rep, 42: 113157 |
|
GSE228531 |
| Zhang, Yufan et al. (2021) Transcriptome Analysis Reveals an Inhibitory Effect of Dihydrotestosterone-Treated 2D- and 3D-Cultured Dermal Papilla Cells on Hair Follicle Growth.; Front Cell Dev Biol, 9: 724310 |
|
GSE178374 |
| Zhang, Yuxiang et al. (2017) The hepatic circadian clock fine-tunes the lipogenic response to feeding through RORα/γ.; Genes Dev, 31: 1202-1211 |
|
GSE101079 |
| Zhang, Yuzhen et al. (2008) A Gata6-Wnt pathway required for epithelial stem cell development and airway regeneration.; Nat Genet, 40: 862-70 |
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GSE11165 |
| Zhang, Zaikuan et al. (2025) Baicalin alleviates lipid accumulation in adipocytes via inducing metabolic reprogramming and targeting Adenosine A1 receptor.; Toxicon, 258: 108339 |
|
GSE285116 |
| Zhang, Zengyu et al. (2023) Cortex-specific transcriptome profiling reveals upregulation of interferon-regulated genes after deeper cerebral hypoperfusion in mice.; Front Physiol, 14: 1056354 |
|
GSE210666 |
| Zhang, Zengyu et al. (2024) Integrated Analysis of Chromatin and Transcriptomic Profiling Identifies PU.1 as a Core Regulatory Factor in Microglial Activation Induced by Chronic Cerebral Hypoperfusion.; Mol Neurobiol, 61: 2569-2589 |
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GSE229259 |
| Zhang, Zhaoduo et al. (2007) Identification of expression patterns of IL-2-responsive genes in the murine T cell line CTLL-2.; J Interferon Cytokine Res, 27: 991-5 |
|
GSE6085 |
| Zhang, Zhen et al. (2023) Submicron-Grooved Films Modulate the Directional Alignment and Biological Function of Schwann Cells.; J Funct Biomater, 14: [no pages] |
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GSE226857 |
| Zhang, Zhengwei et al. (2023) PP2Ac knockdown attenuates lipotoxicity‑induced pancreatic β‑cell dysfunction and apoptosis.; Exp Ther Med, 26: 549 |
|
GSE242538 |
| Zhang, Zhenxi et al. (2008) SMN deficiency causes tissue-specific perturbations in the repertoire of snRNAs and widespread defects in splicing.; Cell, 133: 585-600 |
|
GSE10599 |
| Zhang, Zhigang et al. (2025) MLKL-USP7-UBA52 signaling is indispensable for autophagy in brain through maintaining ubiquitin homeostasis.; Autophagy, 21: 424-446 |
|
GSE270139 |
| Zhang, Zhihui et al. (2024) Acupuncture Extended the Thrombolysis Window by Suppressing Blood-Brain Barrier Disruption and Regulating Autophagy-Apoptosis Balance after Ischemic Stroke.; Brain Sci, 14: [no pages] |
|
GSE262257 |
| Zhang, Zhuangzhi et al. (2019) Zfhx3 is required for the differentiation of late born D1-type medium spiny neurons.; Exp Neurol, 322: 113055 |
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GSE127976 |
| Zhang, Zhuangzhuang et al. (2022) Targeting Plk1 Sensitizes Pancreatic Cancer to Immune Checkpoint Therapy.; Cancer Res, 82: 3532-3548 |
|
GSE189048 |
| Zhang, Zong Hong et al. (2014) A comparative study of techniques for differential expression analysis on RNA-Seq data.; PLoS One, 9: e103207 |
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GSE57440 |
| Zhao, Bin-Bin et al. (2013) T Lymphocytes from Chronic HCV-Infected Patients Are Primed for Activation-Induced Apoptosis and Express Unique Pro-Apoptotic Gene Signature.; PLoS One, 8: e77008 |
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GSE49954 |
| Zhao, Bo et al. (2011) Epstein-Barr virus nuclear antigen 3C regulated genes in lymphoblastoid cell lines.; Proc Natl Acad Sci U S A, 108: 337-42 |
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GSE24362 |
| Zhao, Changjiu et al. (2012) Gene expression changes in the septum: possible implications for microRNAs in sculpting the maternal brain.; PLoS One, 7: e38602 |
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GSE30836 |
| Zhao, Changjiu et al. (2014) Addiction and reward-related genes show altered expression in the postpartum nucleus accumbens.; Front Behav Neurosci, 8: 388 |
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GSE62258 |
| Zhao, Changjiu et al. (2018) The circadian gene Nr1d1 in the mouse nucleus accumbens modulates sociability and anxiety-related behavior.; Eur J Neurosci, [no vol.]: [no pages] |
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GSE110363 |
| Zhao, Changjiu et al. (2020) Mu opioid receptors in the medial preoptic area govern social play behavior in adolescent male rats.; Genes Brain Behav, 19: e12662 |
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GSE148007 |
| Zhao, Chen et al. (2009) Noninvasive detection of candidate molecular biomarkers in subjects with a history of insulin resistance and colorectal adenomas.; Cancer Prev Res (Phila), 2: 590-7 |
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GSE14797 |
| Zhao, Chun-Mei et al. (2014) Denervation suppresses gastric tumorigenesis.; Sci Transl Med, 6: 250ra115 |
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GSE30295 |
| Zhao, Chuntao et al. (2018) Dual Requirement of CHD8 for Chromatin Landscape Establishment and Histone Methyltransferase Recruitment to Promote CNS Myelination and Repair.; Dev Cell, 45: 753-768.e8 |
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GSE107919.1 |
| Zhao, Dan et al. (2024) Monocytes Release Pro-Cathepsin D to Drive Blood-to-Brain Transcytosis in Diabetes.; Circ Res, 134: e17-e33 |
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GSE253502 |
| Zhao, Dan et al. (2024) Transcriptome dynamics in mouse amygdala under acute and chronic stress revealed by thiol-labeled RNA sequencing.; Neurobiol Stress, 33: 100688 |
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GSE274148 |
| Zhao, Dejian et al. (2017) Transcriptome analysis of microglia in a mouse model of Rett syndrome: differential expression of genes associated with microglia/macrophage activation and cellular stress.; Mol Autism, 8: 17 |
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GSE90736 |
| Zhao, Gang et al. (2013) Jnk1 in murine hepatic stellate cells is a crucial mediator of liver fibrogenesis.; Gut, [no vol.]: [no pages] |
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GSE40041 |
| Zhao, Guo-Kun et al. (2022) TRH Regulates the Synthesis and Secretion of Prolactin in Rats with Adenohypophysis through the Differential Expression of miR-126a-5p.; Int J Mol Sci, 23: [no pages] |
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GSE221560 |
| Zhao, Hong et al. (2012) The effect of mTOR inhibition alone or combined with MEK inhibitors on brain metastasis: an in vivo analysis in triple-negative breast cancer models.; Breast Cancer Res Treat, 131: 425-36 |
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GSE46928 |
| Zhao, Hongyun et al. (2022) Myeloid-derived itaconate suppresses cytotoxic CD8+T cells and promotes tumour growth.; Nat Metab, 4: 1660-1673 |
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GSE190028 |
| Zhao, Houyu et al. (2024) CCR3 knockdown attenuates prolonged underwater operations-induced cognitive impairment via alleviating microglia-mediated neuroinflammation.; iScience, 27: 110379 |
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GSE247651 |
| Zhao, Hu et al. (2014) Secretion of shh by a neurovascular bundle niche supports mesenchymal stem cell homeostasis in the adult mouse incisor.; Cell Stem Cell, 14: 160-73 |
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GSE51479 |
| Zhao, Hua et al. (2012) Associations between gene expression variations and ovarian cancer risk alleles identified from genome wide association studies.; PLoS One, 7: e47962 |
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GSE37582 |
| Zhao, Jia et al. (2024) PDX1+ cell budding morphogenesis in a stem cell-derived islet spheroid system.; Nat Commun, 15: 5894 |
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GSE249020 |
| Zhao, Jianwei et al. (2023) RNA-seq reveals Nup62 as a potential regulator for cell division after traumatic brain injury in mice hippocampus.; PeerJ, 11: e14913 |
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GSE214701 |
| Zhao, Jiaxu et al. (2024) Dura immunity configures leptomeningeal metastasis immunosuppression for cerebrospinal fluid barrier invasion.; Nat Cancer, 5: 1940-1961 |
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GSE267325 |
| Zhao, Jicheng et al. (2024) H2AK119ub1 differentially fine-tunes gene expression by modulating canonical PRC1- and H1-dependent chromatin compaction.; Mol Cell, 84: 1191-1205.e7 |
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GSE232140 |
| Zhao, Jincun et al. (2016) MAVS Expressed by Hematopoietic Cells Is Critical for Control of West Nile Virus Infection and Pathogenesis.; J Virol, 90: 7098-7108 |
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GSE79417 |
| Zhao, Jingru et al. (2024) Oncogenic transcription factors instruct promoter-enhancer hubs in individual triple negative breast cancer cells.; Sci Adv, 10: eadl4043 |
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GSE264707 |
| Zhao, Jun et al. (2020) Deamidation Shunts RelA from Mediating Inflammation to Aerobic Glycolysis.; Cell Metab, 31: 937-955.e7 |
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GSE132868 GSE132871 |
| Zhao, Kaiyue et al. (2022) RNA sequencing-based identification of the regulatory mechanism of microRNAs, transcription factors, and corresponding target genes involved in vascular dementia.; Front Neurosci, 16: 917489 |
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GSE199508.2 |
| Zhao, Lianzhong et al. (2021) Transcription factor MEF2D is required for the maintenance of MLL-rearranged acute myeloid leukemia.; Blood Adv, 5: 4727-4740 |
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GSE165981 |
| Zhao, Lijun et al. (2023) Time-restricted eating alters the 24-hour profile of adipose tissue transcriptome in men with obesity.; Obesity (Silver Spring), 31 Suppl 1: 63-74 |
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GSE168705 |
| Zhao, Lili et al. (2021) miR-20a Promotes the Axon Regeneration of DRG Neurons by Targeting Nr4a3.; Neurosci Bull, 37: 569-574 |
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GSE137838 |
| Zhao, Liwei et al. (2023) BCL2 Inhibition Reveals a Dendritic Cell-Specific Immune Checkpoint That Controls Tumor Immunosurveillance.; Cancer Discov, 13: 2448-2469 |
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GSE218062 |
| Zhao, Mei et al. (2024) Mutant p53 gains oncogenic functions through a chromosomal instability-induced cytosolic DNA response.; Nat Commun, 15: 180 |
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GSE164432.2 GSE164432.1 GSE163675 GSE165374 |
| Zhao, Min et al. (2021) Mineralocorticoid Receptor Pathway and Its Antagonism in a Model of Diabetic Retinopathy.; Diabetes, 70: 2668-2682 |
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GSE163255 |
| Zhao, Mingming et al. (2004) Microarray analysis of gene expression after transverse aortic constriction in mice.; Physiol Genomics, 19: 93-105 |
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GSE1621 |
| Zhao, Mingming et al. (2018) Transcriptional outcomes and kinetic patterning of gene expression in response to NF-κB activation.; PLoS Biol, 16: e2006347 |
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GSE117254 |
| Zhao, Na et al. (2022) Elevating microglia TREM2 reduces amyloid seeding and suppresses disease-associated microglia.; J Exp Med, 219: [no pages] |
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GSE161227 GSE161230 GSE161224 |
| Zhao, Na et al. (2025) The antiprotease Spink7 promotes inflammation resolution by modulating multiple proteases activities during wound healing.; Clin Transl Med, 15: e70291 |
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GSE282599 |
| Zhao, Pingsen et al. (2012) Changes in microRNA expression induced by rabies virus infection in mouse brains.; Microb Pathog, 52: 47-54 |
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GSE26270 |
| Zhao, Po et al. (2002) Slug is a novel downstream target of MyoD. Temporal profiling in muscle regeneration.; J Biol Chem, 277: 30091-101 |
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GSE469.1 |
| Zhao, S et al. (2015) NKD2, a negative regulator of Wnt signaling, suppresses tumor growth and metastasis in osteosarcoma.; Oncogene, 34: 5069-79 |
|
GSE43281 |
| Zhao, Shuai et al. (2023) TNRC18 engages H3K9me3 to mediate silencing of endogenous retrotransposons.; Nature, 623: 633-642 |
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GSE233829 |
| Zhao, Wenchao et al. (2019) Ribosome profiling of selenoproteinsin vivoreveals consequences of pathogenicSecisbp2missense mutations.; J Biol Chem, 294: 14185-14200 |
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GSE119681 |
| Zhao, Wenguo et al. (2024) SUMOylation modification of HNRNPK at the K422 site promotes invasion in glioblastoma.; Int J Biol Sci, 20: 5715-5730 |
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GSE262681 |
| Zhao, X et al. (2001) Transcriptional profiling reveals strict boundaries between hippocampal subregions.; J Comp Neurol, 441: 187-96 |
|
zhao-hippocampus |
| Zhao, Xianghui et al. (2021) Terahertz exposure enhances neuronal synaptic transmission and oligodendrocyte differentiationin vitro.; iScience, 24: 103485 |
|
GSE178729 |
| Zhao, Xiaofeng et al. (2018) Noninflammatory Changes of Microglia Are Sufficient to Cause Epilepsy.; Cell Rep, 22: 2080-2093 |
|
GSE108625 |
| Zhao, Xiaojie et al. (2022) HIV Tat and cocaine interactively alter genome-wide DNA methylation and gene expression and exacerbate learning and memory impairments.; Cell Rep, 39: 110765 |
|
GSE200189 |
| Zhao, Xinghua et al. (2025) Ezh2 Regulates Early Astrocyte Morphogenesis and Influences the Coverage of Astrocytic Endfeet on the Vasculature.; Cell Prolif, [no vol.]: e70015 |
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GSE283622 |
| Zhao, Xingwang et al. (2021) Identification of key biomarkers and immune infiltration in systemic lupus erythematosus by integrated bioinformatics analysis.; J Transl Med, 19: 35 |
|
GSE4588 |
| Zhao, Xinhui et al. (2022) PU.1-c-Jun interaction is crucial for PU.1 function in myeloid development.; Commun Biol, 5: 961 |
|
GSE27873 |
| Zhao, Xiumei et al. (2012) Global gene expression profiling confirms the molecular fidelity of primary tumor-based orthotopic xenograft mouse models of medulloblastoma.; Neuro Oncol, 14: 574-83 |
|
GSE28192 |
| Zhao, Xuan et al. (2024) Increased neutrophil extracellular traps caused by diet-induced obesity delay fracture healing.; FASEB J, 38: e70126 |
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GSE268729 |
| Zhao, Xuesong et al. (2015) RAS/MAPK Activation Drives Resistance to Smo Inhibition, Metastasis, and Tumor Evolution in Shh Pathway-Dependent Tumors.; Cancer Res, 75: 3623-35 |
|
GSE69359 |
| Zhao, Yan et al. (2023) PGF2αfacilitates pathological retinal angiogenesis by modulating endothelial FOS-driven ELR+CXC chemokine expression.; EMBO Mol Med, 15: e16373 |
|
GSE164199 |
| Zhao, Yan et al. (2024) Inhibition of endothelial histone deacetylase 2 shifts endothelial-mesenchymal transitions in cerebral arteriovenous malformation models.; J Clin Invest, 134: [no pages] |
|
GSE262300 |
| Zhao, Yang et al. (2008) Two supporting factors greatly improve the efficiency of human iPSC generation.; Cell Stem Cell, 3: 475-9 |
|
GSE12922 |
| Zhao, Yang et al. (2015) A XEN-like State Bridges Somatic Cells to Pluripotency during Chemical Reprogramming.; Cell, 163: 1678-91 |
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GSE73631 |
| Zhao, Yinan et al. (2020) Oligodendroglial connexin 47 regulates neuroinflammation upon autoimmune demyelination in a novel mouse model of multiple sclerosis.; Proc Natl Acad Sci U S A, 117: 2160-2169 |
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GSE121335 |