List of all 22,542 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Correia, Jorge C et al. (2021) Muscle-secreted neurturin couples myofiber oxidative metabolism and slow motor neuron identity.; Cell Metab, 33: 2215-2230.e8 |
|
GSE180266 GSE155068 |
| Correia, Jorge C et al. (2024) Zfp697 is an RNA-binding protein that regulates skeletal muscle inflammation and remodeling.; Proc Natl Acad Sci U S A, 121: e2319724121 |
|
GSE273093 |
| Corsello, Steven M et al. (2020) Discovering the anti-cancer potential of non-oncology drugs by systematic viability profiling.; Nat Cancer, 1: 235-248 |
|
GSE133285 |
| Corsi, Giulia I et al. (2022) The transcriptomic landscape of neurons carrying PSEN1 mutations reveals changes in extracellular matrix components and non-coding gene expression.; Neurobiol Dis, 178: 105980 |
|
GSE211993 |
| Corsini, Nina S et al. (2009) The death receptor CD95 activates adult neural stem cells for working memory formation and brain repair.; Cell Stem Cell, 5: 178-90 |
|
GSE15623 |
| Corso-Díaz, Ximena et al. (2020) Genome-wide Profiling Identifies DNA Methylation Signatures of Aging in Rod Photoreceptors Associated with Alterations in Energy Metabolism.; Cell Rep, 31: 107525 |
|
GSE134871 |
| Cortes, Daniel E et al. (2024) An in vitro neurogenetics platform for precision disease modeling in the mouse.; Sci Adv, 10: eadj9305 |
|
GSE194402 |
| Cortez, Alexander Jorge et al. (2020) Evaluation of the Role of ITGBL1 in Ovarian Cancer.; Cancers (Basel), 12: [no pages] |
|
GSE166029 |
| Cortez, Diego et al. (2014) Origins and functional evolution of Y chromosomes across mammals.; Nature, 508: 488-93 |
|
GSE50747.4 |
| Corti, Serena et al. (2025) Recreating pathophysiology of CLN2 disease and demonstrating reversion by TPP1 gene therapy in hiPSC-derived retinal organoids and retina-on-chip.; Cell Rep Med, 6: 102244 |
|
GSE297954 |
| Corti, Stefania et al. (2006) Transplanted ALDHhiSSClo neural stem cells generate motor neurons and delay disease progression of nmd mice, an animal model of SMARD1.; Hum Mol Genet, 15: 167-87 |
|
GSE3075 |
| Corti, Stefania et al. (2008) Neural stem cell transplantation can ameliorate the phenotype of a mouse model of spinal muscular atrophy.; J Clin Invest, 118: 3316-30 |
|
GSE10224 |
| Corti, Stefania et al. (2012) Direct reprogramming of human astrocytes into neural stem cells and neurons.; Exp Cell Res, 318: 1528-41 |
|
GSE36145 |
| Corti, Stefania et al. (2012) Genetic correction of human induced pluripotent stem cells from patients with spinal muscular atrophy.; Sci Transl Med, 4: 165ra162 |
|
GSE27205 GSE27206 |
| Cortés-Malagón, Enoc M et al. (2013) Gene expression profile regulated by the HPV16 E7 oncoprotein and estradiol in cervical tissue.; Virology, 447: 155-65 |
|
GSE46890 |
| Corvol, Jean-Christophe et al. (2008) Abrogation of T cell quiescence characterizes patients at high risk for multiple sclerosis after the initial neurological event.; Proc Natl Acad Sci U S A, 105: 11839-44 |
|
GSE13732 |
| Coser, Kathryn R et al. (2003) Global analysis of ligand sensitivity of estrogen inducible and suppressible genes in MCF7/BUS breast cancer cells by DNA microarray.; Proc Natl Acad Sci U S A, 100: 13994-9 |
|
GSE4668 |
| Coser, Kathryn R et al. (2009) Antiestrogen-resistant subclones of MCF-7 human breast cancer cells are derived from a common monoclonal drug-resistant progenitor.; Proc Natl Acad Sci U S A, 106: 14536-41 |
|
GSE14986 |
| Cossec, Jack-Christophe et al. (2023) Transient suppression of SUMOylation in embryonic stem cells generates embryo-like structures.; Cell Rep, 42: 112380 |
|
GSE180676 |
| Cossetti, Chiara et al. (2014) Extracellular vesicles from neural stem cells transfer IFN-? via Ifngr1 to activate Stat1 signaling in target cells.; Mol Cell, 56: 193-204 |
|
GSE33527 |
| Costa, C et al. (2013) E2F1 loss induces spontaneous tumour development in Rb-deficient epidermis.; Oncogene, 32: 2937-51 |
|
GSE38048 |
| Costa, Pedro L F et al. (2019) Transcriptomic Response to 1,25-Dihydroxyvitamin D in Human Fibroblasts with or without a Functional Vitamin D Receptor (VDR): Novel Target Genes and Insights into VDR Basal Transcriptional Activity.; Cells, 8: [no pages] |
|
GSE127314 |
| Costales, Jaime A et al. (2009) Cytokine-dependent and-independent gene expression changes and cell cycle block revealed in Trypanosoma cruzi-infected host cells by comparative mRNA profiling.; BMC Genomics, 10: 252 |
|
GSE13791 |
| Costales-Carrera, Alba et al. (2020) Comparative Study of Organoids from Patient-Derived Normal and Tumor Colon and Rectal Tissue.; Cancers (Basel), 12: [no pages] |
|
GSE143782 |
| Costea, Daniela Elena et al. (2013) Identification of two distinct carcinoma-associated fibroblast subtypes with differential tumor-promoting abilities in oral squamous cell carcinoma.; Cancer Res, 73: 3888-901 |
|
GSE38517 |
| Costello, Christine M et al. (2008) Lung-selective gene responses to alveolar hypoxia: potential role for the bone morphogenetic antagonist gremlin in pulmonary hypertension.; Am J Physiol Lung Cell Mol Physiol, 295: L272-84 |
|
GSE11341 |
| Costello, Patrick et al. (2010) Ternary complex factors SAP-1 and Elk-1, but not net, are functionally equivalent in thymocyte development.; J Immunol, 185: 1082-92 |
|
GSE21546 |
| Costello, Patrick et al. (2015) MRTF-SRF signaling is required for seeding of HSC/Ps in bone marrow during development.; Blood, 125: 1244-55 |
|
GSE63820 |
| Costigan, Michael et al. (2009) T-cell infiltration and signaling in the adult dorsal spinal cord is a major contributor to neuropathic pain-like hypersensitivity.; J Neurosci, 29: 14415-22 |
|
GSE18803 |
| Costigan, Michael et al. (2010) Multiple chronic pain states are associated with a common amino acid-changing allele in KCNS1.; Brain, 133: 2519-27 |
|
GSE30691 |
| Cote, Jessica L et al. (2021) Deletion of the Brain-Specific α and δ Isoforms of Adapter Protein SH2B1 Protects Mice From Obesity.; Diabetes, 70: 400-414 |
|
GSE145202 |
| Cotero, Victoria et al. (2022) Stimulation of the hepatoportal nerve plexus with focused ultrasound restores glucose homoeostasis in diabetic mice, rats and swine.; Nat Biomed Eng, 6: 683-705 |
|
GSE197097 |
| Cotney, Justin et al. (2015) The autism-associated chromatin modifier CHD8 regulates other autism risk genes during human neurodevelopment.; Nat Commun, 6: 6404 |
|
GSE57369.2 |
| Cottet, Sandra et al. (2006) Biological characterization of gene response in Rpe65-/- mouse model of Leber's congenital amaurosis during progression of the disease.; FASEB J, 20: 2036-49 |
|
GSE3249 |
| Couch, Amalie C M et al. (2023) Acute IL-6 exposure triggers canonical IL6Ra signaling in hiPSC microglia, but not neural progenitor cells.; Brain Behav Immun, 110: 43-59 |
|
GSE278224 |
| Couch, Amalie C M et al. (2024) Transcriptional and cellular response of hiPSC-derived microglia-neural progenitor co-cultures exposed to IL-6.; Brain Behav Immun, 122: 27-43 |
|
GSE279125 |
| Coudé, Marie-Magdelaine et al. (2015) BET inhibitor OTX015 targets BRD2 and BRD4 and decreases c-MYC in acute leukemia cells.; Oncotarget, 6: 17698-712 |
|
GSE70263 |
| Cougnoux, Antony et al. (2018) Microglia activation in Niemann-Pick disease, type C1 is amendable to therapeutic intervention.; Hum Mol Genet, 27: 2076-2089 |
|
GSE109083 |
| Coulibaly, Anna et al. (2019) AKIRIN1: A Potential New Reference Gene in Human Natural Killer Cells and Granulocytes in Sepsis.; Int J Mol Sci, 20: [no pages] |
|
GSE123730 |
| Coulouarn, Cédric et al. (2012) Combined hepatocellular-cholangiocarcinomas exhibit progenitor features and activation of Wnt and TGF? signaling pathways.; Carcinogenesis, 33: 1791-6 |
|
GSE35306 |
| Coulter, Michael E et al. (2018) The ESCRT-III Protein CHMP1A Mediates Secretion of Sonic Hedgehog on a Distinctive Subtype of Extracellular Vesicles.; Cell Rep, 24: 973-986.e8 |
|
GSE115867.1 |
| Courtin, Aurélie et al. (2012) Glucocorticoid receptor activity discriminates between progesterone and medroxyprogesterone acetate effects in breast cells.; Breast Cancer Res Treat, 131: 49-63 |
|
GSE23500 |
| Coustan-Smith, Elaine et al. (2009) Early T-cell precursor leukaemia: a subtype of very high-risk acute lymphoblastic leukaemia.; Lancet Oncol, 10: 147-56 |
|
GSE8879 |
| Coustan-Smith, Elaine et al. (2011) New markers for minimal residual disease detection in acute lymphoblastic leukemia.; Blood, 117: 6267-76 |
|
GSE28497 |
| Couture, Camille et al. (2016) The tissue-engineered human cornea as a model to study expression of matrix metalloproteinases during corneal wound healing.; Biomaterials, 78: 86-101 |
|
GSE75336 |
| Couturier, Aude et al. (2021) Reproducing diabetic retinopathy features using newly developed human induced-pluripotent stem cell-derived retinal Müller glial cells.; Glia, [no vol.]: [no pages] |
|
GSE166565 |
| Covacu, Ruxandra et al. (2014) Change of fate commitment in adult neural progenitor cells subjected to chronic inflammation.; J Neurosci, 34: 11571-82 |
|
GSE46373 |
| Covey, Matthew V et al. (2012) REST regulates the pool size of the different neural lineages by restricting the generation of neurons and oligodendrocytes from neural stem/progenitor cells.; Development, 139: 2878-90 |
|
GSE38538 |
| Cowan, Maureen N et al. (2022) Microglial STAT1-sufficiency is required for resistance to toxoplasmic encephalitis.; PLoS Pathog, 18: e1010637 |
|
GSE203655 GSE204751 |
| Cox, Aaron R et al. (2013) Cellular mechanisms underlying failed beta cell regeneration in offspring of protein-restricted pregnant mice.; Exp Biol Med (Maywood), 238: 1147-59 |
|
GSE38215 |
| Cox, Laura E et al. (2010) Mutations in CHMP2B in lower motor neuron predominant amyotrophic lateral sclerosis (ALS).; PLoS One, 5: e9872 |
|
GSE19332 |
| Cox, Laura M et al. (2014) Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences.; Cell, 158: 705-21 |
|
GSE58089 |
| Cox, Olivia H et al. (2024) Transcriptomic Plasticity of the Circadian Clock in Response to Photoperiod: A Study in Male Melatonin-Competent Mice.; J Biol Rhythms, [no vol.]: 7487304241265439 |
|
GSE266472 |
| Cox, Sharon N et al. (2010) Altered modulation of WNT-beta-catenin and PI3K/Akt pathways in IgA nephropathy.; Kidney Int, 78: 396-407 |
|
GSE14795 |
| Cox-Limpens, Kimberly E M et al. (2014) Fetal asphyctic preconditioning alters the transcriptional response to perinatal asphyxia.; BMC Neurosci, 15: 67 |
|
GSE42676 |
| Coykendall, Vy M N et al. (2024) RFX6 Maintains Gene Expression and Function of Adult Human Islet α-Cells.; Diabetes, 73: 448-460 |
|
GSE248853 |
| Coyoy-Salgado, Angélica et al. (2023) Gene expression and locomotor recovery in adult rats with spinal cord injury and plasma-synthesized polypyrrole/iodine application combined with a mixed rehabilitation scheme.; Front Neurol, 14: 1124245 |
|
GSE223820 |
| Cozzolino, Kira et al. (2023) Mediator kinase inhibition suppresses hyperactive interferon signaling in Down syndrome.; bioRxiv, [no vol.]: [no pages] |
|
GSE220652 |
| Craciun, Florin L et al. (2016) RNA Sequencing Identifies Novel Translational Biomarkers of Kidney Fibrosis.; J Am Soc Nephrol, 27: 1702-13 |
|
GSE65267 |
| Cramer-Morales, Kimberly et al. (2013) Personalized synthetic lethality induced by targeting RAD52 in leukemias identified by gene mutation and expression profile.; Blood, 122: 1293-304 |
|
GSE48558 GSE47927 |
| Crapser, Joshua D et al. (2020) Microglial depletion prevents extracellular matrix changes and striatal volume reduction in a model of Huntington's disease.; Brain, 143: 266-288 |
|
GSE136158 |
| Craveiro, Luis M et al. (2008) Neutralization of the membrane protein Nogo-A enhances growth and reactive sprouting in established organotypic hippocampal slice cultures.; Eur J Neurosci, 28: 1808-24 |
|
GSE12483 |
| Crawford, Alison et al. (2014) Molecular and transcriptional basis of CD4⁺ T cell dysfunction during chronic infection.; Immunity, 40: 289-302 |
|
GSE30431 |
| Crawford, Peter A et al. (2009) Regulation of myocardial ketone body metabolism by the gut microbiota during nutrient deprivation.; Proc Natl Acad Sci U S A, 106: 11276-81 |
|
GSE14929 |
| Crawford, Yongping et al. (2009) PDGF-C mediates the angiogenic and tumorigenic properties of fibroblasts associated with tumors refractory to anti-VEGF treatment.; Cancer Cell, 15: 21-34 |
|
GSE13549 |
| Creeth, H D J et al. (2018) Maternal care boosted by paternal imprinting in mammals.; PLoS Biol, 16: e2006599 |
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GSE115276 |
| Creighton, Chad J et al. (2008) Development of resistance to targeted therapies transforms the clinically associated molecular profile subtype of breast tumor xenografts.; Cancer Res, 68: 7493-501 |
|
GSE8141 |
| Creighton, Chad J et al. (2008) Insulin-like growth factor-I activates gene transcription programs strongly associated with poor breast cancer prognosis.; J Clin Oncol, 26: 4078-85 |
|
GSE7561 |
| Creighton, Chad J et al. (2009) Residual breast cancers after conventional therapy display mesenchymal as well as tumor-initiating features.; Proc Natl Acad Sci U S A, 106: 13820-5 |
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GSE7513 GSE7515 GSE10281 |
| Creighton, Chad J et al. (2010) Molecular profiling uncovers a p53-associated role for microRNA-31 in inhibiting the proliferation of serous ovarian carcinomas and other cancers.; Cancer Res, 70: 1906-15 |
|
GSE16708 |
| Creighton, Chad J et al. (2012) A gene transcription signature of obesity in breast cancer.; Breast Cancer Res Treat, [no vol.]: [no pages] |
|
GSE24185 |
| Cresto, Noemie et al. (2022) Hippocampal Excitatory Synaptic Transmission and Plasticity Are Differentially Altered during Postnatal Development by Loss of the X-Linked Intellectual Disability Protein Oligophrenin-1.; Cells, 11: [no pages] |
|
GSE190891 |
| Creus-Muncunill, Jordi et al. (2021) Huntington's disease brain-derived small RNAs recapitulate associated neuropathology in mice.; Acta Neuropathol, 141: 565-584 |
|
GSE165667 GSE165658 |
| Creus-Muncunill, Jordi et al. (2024) TYROBP/DAP12 knockout in Huntington's disease Q175 mice cell-autonomously decreases microglial expression of disease-associated genes and non-cell-autonomously mitigates astrogliosis and motor deterioration.; J Neuroinflammation, 21: 66 |
|
GSE195633 GSE193573 |
| Crewe, Morgan et al. (2026) RNAPII and DNA supercoiling regulate cohesin engagement in neurons.; Nucleic Acids Res, 54: [no pages] |
|
GSE282195 |
| Crews, David et al. (2012) Epigenetic transgenerational inheritance of altered stress responses.; Proc Natl Acad Sci U S A, 109: 9143-8 |
|
GSE26737 |
| Cribbs, Adam P et al. (2021) Dissecting the Role of BET Bromodomain Proteins BRD2 and BRD4 in Human NK Cell Function.; Front Immunol, 12: 626255 |
|
GSE156423.1 |
| Crispi, Stefania et al. (2009) Global gene expression profiling of human pleural mesotheliomas: identification of matrix metalloproteinase 14 (MMP-14) as potential tumour target.; PLoS One, 4: e7016 |
|
GSE12345 |
| Crispi, Stefania et al. (2013) Transcriptional profiling of endometriosis tissues identifies genes related to organogenesis defects.; J Cell Physiol, 228: 1927-34 |
|
GSE25628 |
| Crist, Angela M et al. (2019) Angiopoietin-2 Inhibition Rescues Arteriovenous Malformation in a Smad4 Hereditary Hemorrhagic Telangiectasia Mouse Model.; Circulation, 139: 2049-2063 |
|
GSE116230 |
| Cristea, Sandra et al. (2020) The MEK5-ERK5 Kinase Axis Controls Lipid Metabolism in Small-Cell Lung Cancer.; Cancer Res, 80: 1293-1303 |
|
GSE121538.1 GSE121538.2 |
| Critchley-Thorne, Rebecca J et al. (2007) Down-regulation of the interferon signaling pathway in T lymphocytes from patients with metastatic melanoma.; PLoS Med, 4: e176 |
|
GSE6887 |
| Crittenden, Jill R et al. (2021) Striatal transcriptome changes linked to drug-induced repetitive behaviors.; Eur J Neurosci, 53: 2450-2468 |
|
GSE157913 |
| Croce, Katherine R et al. (2025) A rare genetic variant confers resistance to neurodegeneration across multiple neurological disorders by augmenting selective autophagy.; Neuron, [no vol.]: [no pages] |
|
GSE281823 |
| Croci, Davide et al. (2022) Multispectral fluorine-19 MRI enables longitudinal and noninvasive monitoring of tumor-associated macrophages.; Sci Transl Med, 14: eabo2952 |
|
GSE190109 |
| Croci, Ottavio et al. (2017) Transcriptional integration of mitogenic and mechanical signals by Myc and YAP.; Genes Dev, 31: 2017-2022 |
|
GSE107583 |
| Croker, Ben A et al. (2003) SOCS3 negatively regulates IL-6 signaling in vivo.; Nat Immunol, 4: 540-5 |
|
GSE369 |
| Croker, Ben et al. (2007) ATP-sensitive potassium channels mediate survival during infection in mammals and insects.; Nat Genet, 39: 1453-60 |
|
GSE7605 |
| Cromer, Anne et al. (2004) Identification of genes associated with tumorigenesis and metastatic potential of hypopharyngeal cancer by microarray analysis.; Oncogene, 23: 2484-98 |
|
GSE2379 |
| Cronin, T et al. (2010) The disruption of the rod-derived cone viability gene leads to photoreceptor dysfunction and susceptibility to oxidative stress.; Cell Death Differ, 17: 1199-210 |
|
GSE13869 |
| Cronk, James C et al. (2015) Methyl-CpG Binding Protein 2 Regulates Microglia and Macrophage Gene Expression in Response to Inflammatory Stimuli.; Immunity, 42: 679-91 |
|
GSE66211 |