List of all 22,542 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Cole, Suzanne et al. (2023) Differential regulation of IL-17A and IL-17F via STAT5 contributes to psoriatic disease.; J Allergy Clin Immunol, 152: 783-798 |
|
GSE189230 |
| Cole, Toby B et al. (2011) Repeated developmental exposure of mice to chlorpyrifos oxon is associated with paraoxonase 1 (PON1)-modulated effects on cerebellar gene expression.; Toxicol Sci, 123: 155-69 |
|
GSE25250 |
| Cole, Toby B et al. (2014) Repeated gestational exposure of mice to chlorpyrifos oxon is associated with paraoxonase 1 (PON1) modulated effects in maternal and fetal tissues.; Toxicol Sci, 141: 409-22 |
|
GSE58103 |
| Colella, Pasqualina et al. (2020) Gene therapy with secreted acid alpha-glucosidase rescues Pompe disease in a novel mouse model with early-onset spinal cord and respiratory defects.; EBioMedicine, 61: 103052 |
|
GSE156230 |
| Coleman, Daniel J et al. (2016) Cellular androgen content influences enzalutamide agonism of F877L mutant androgen receptor.; Oncotarget, 7: 40690-40703 |
|
GSE69896 |
| Coleman, Daniel J et al. (2019) Maintenance of MYC expression promotes de novo resistance to BET bromodomain inhibition in castration-resistant prostate cancer.; Sci Rep, 9: 3823 |
|
GSE98069 |
| Coleman, Daniel J L et al. (2023) Gene regulatory network analysis predicts cooperating transcription factor regulons required for FLT3-ITD+ AML growth.; Cell Rep, 42: 113568 |
|
GSE236772 |
| Coles, Garry L et al. (2020) Unbiased Proteomic Profiling Uncovers a Targetable GNAS/PKA/PP2A Axis in Small Cell Lung Cancer Stem Cells.; Cancer Cell, 38: 129-143.e7 |
|
GSE126353 |
| Coletta, Dawn K et al. (2008) Effect of acute physiological hyperinsulinemia on gene expression in human skeletal muscle in vivo.; Am J Physiol Endocrinol Metab, 294: E910-7 |
|
GSE9105 |
| Collado, Manuel et al. (2007) Genomic profiling of circulating plasma RNA for the analysis of cancer.; Clin Chem, 53: 1860-3 |
|
GSE4988 |
| Collier, Claudia A et al. (2025) Persistent enteric neuroinflammation chronically impairs colonic motility in a pyridostigmine bromide-induced mouse model of Gulf War illness.; Biol Open, 14: [no pages] |
|
GSE276269 |
| Collino, Sebastiano et al. (2013) Transcriptomics and Metabonomics Identify Essential Metabolic Signatures in Calorie Restriction (CR) Regulation across Multiple Mouse Strains.; Metabolites, 3: 881-911 |
|
GSE50789 |
| Collins, Charlotte A et al. (2011) Reprogramming adult dermis to a neonatal state through epidermal activation of ?-catenin.; Development, 138: 5189-99 |
|
GSE32966 |
| Collins, James F et al. (2005) Identification of differentially expressed genes in response to dietary iron deprivation in rat duodenum.; Am J Physiol Gastrointest Liver Physiol, 288: G964-71 |
|
GSE1892 |
| Collins, James F et al. (2008) Induction of arachidonate 12-lipoxygenase (Alox15) in intestine of iron-deficient rats correlates with the production of biologically active lipid mediators.; Am J Physiol Gastrointest Liver Physiol, [no vol.]: [no pages] |
|
GSE7267 |
| Collison, Kate S et al. (2018) Effect of developmental NMDAR antagonism with CGP 39551 on aspartame-induced hypothalamic and adrenal gene expression.; PLoS One, 13: e0194416 |
|
GSE100325 GSE100324 GSE108042 |
| Colombo, Jucimara et al. (2009) Gene expression profiling reveals molecular marker candidates of laryngeal squamous cell carcinoma.; Oncol Rep, 21: 649-63 |
|
GSE10288 |
| Colombo, Paolo C et al. (2014) Peripheral venous congestion causes inflammation, neurohormonal, and endothelial cell activation.; Eur Heart J, 35: 448-54 |
|
GSE38783 |
| Colville, A M et al. (2017) Effects of selection for ethanol preference on gene expression in the nucleus accumbens of HS-CC mice.; Genes Brain Behav, 16: 462-471 |
|
GSE65950 |
| Combes, Alexander N et al. (2018) Haploinsufficiency for the Six2 gene increases nephron progenitor proliferation promoting branching and nephron number.; Kidney Int, 93: 589-598 |
|
GSE103219 |
| Comblain, Fanny et al. (2016) Identification of Targets of a New Nutritional Mixture for Osteoarthritis Management Composed by Curcuminoids Extract, Hydrolyzed Collagen and Green Tea Extract.; PLoS One, 11: e0156902 |
|
GSE75181 |
| Comelli, Elena Maria et al. (2009) Biomarkers of human gastrointestinal tract regions.; Mamm Genome, 20: 516-27 |
|
GSE10867 |
| Comer, Jason E et al. (2006) Murine macrophage transcriptional and functional responses to Bacillus anthracis edema toxin.; Microb Pathog, 41: 96-110 |
|
GSE4712 |
| Comer, Jason E et al. (2010) Transcriptomic and innate immune responses to Yersinia pestis in the lymph node during bubonic plague.; Infect Immun, 78: 5086-98 |
|
GSE22299 |
| Comes, Stefania et al. (2013) L-Proline induces a mesenchymal-like invasive program in embryonic stem cells by remodeling H3K9 and H3K36 methylation.; Stem Cell Reports, 1: 307-21 |
|
GSE50603 |
| Comfort, Nicole et al. (2023) Longitudinal transcriptomic analysis of mouse sciatic nerve reveals pathways associated with age-related muscle pathology.; J Cachexia Sarcopenia Muscle, 14: 1322-1336 |
|
GSE198669 |
| Compagno, Mara et al. (2009) Mutations of multiple genes cause deregulation of NF-kappaB in diffuse large B-cell lymphoma.; Nature, 459: 717-21 |
|
GSE12195 |
| Compagno, Mara et al. (2017) Phosphatidylinositol 3-kinase δ blockade increases genomic instability in B cells.; Nature, 542: 489-493 |
|
GSE77788.1 |
| Condamine, Thomas et al. (2016) Lectin-type oxidized LDL receptor-1 distinguishes population of human polymorphonuclear myeloid-derived suppressor cells in cancer patients.; Sci Immunol, 1: [no pages] |
|
GSE79404 |
| Conde, Jonas N et al. (2022) Powassan Viruses Spread Cell to Cell during Direct Isolation fromIxodesTicks and Persistently Infect Human Brain Endothelial Cells and Pericytes.; J Virol, 96: e0168221 |
|
GSE176251 GSE176252 |
| Conde-Dusman, María J et al. (2021) Control of protein synthesis and memory by GluN3A-NMDA receptors through inhibition of GIT1/mTORC1 assembly.; Elife, 10: [no pages] |
|
GSE175920 |
| Conedera, Federica Maria et al. (2021) The TGFβ/Notch axis facilitates Müller cell-to-epithelial transition to ultimately form a chronic glial scar.; Mol Neurodegener, 16: 69 |
|
GSE132140 |
| Conenello, Gina M et al. (2011) A single N66S mutation in the PB1-F2 protein of influenza A virus increases virulence by inhibiting the early interferon response in vivo.; J Virol, 85: 652-62 |
|
GSE35940 |
| Conesa-Zamora, Pablo et al. (2013) Expression profiling shows differential molecular pathways and provides potential new diagnostic biomarkers for colorectal serrated adenocarcinoma.; Int J Cancer, 132: 297-307 |
|
GSE36758 |
| Conforto, Tara L et al. (2012) Impact of CUX2 on the female mouse liver transcriptome: activation of female-biased genes and repression of male-biased genes.; Mol Cell Biol, 32: 4611-27 |
|
GSE37078 |
| Conger, Kelly O et al. (2023) ASCT2 is the primary serine transporter in cancer cells.; bioRxiv, [no vol.]: [no pages] |
|
GSE269606 |
| Conn, Vanessa M et al. (2020) SRRM4 Expands the Repertoire of Circular RNAs by Regulating Microexon Inclusion.; Cells, 9: [no pages] |
|
GSE159260 |
| Connelly, Carey E et al. (2012) Pertussis toxin exacerbates and prolongs airway inflammatory responses during Bordetella pertussis infection.; Infect Immun, 80: 4317-32 |
|
GSE33995 |
| Connelly, Jon P et al. (2014) Targeted correction of RUNX1 mutation in FPD patient-specific induced pluripotent stem cells rescues megakaryopoietic defects.; Blood, 124: 1926-30 |
|
GSE54295 |
| Connolly, Kate et al. (2009) Stable XIAP knockdown clones of HCT116 colon cancer cells are more sensitive to TRAIL, taxanes and irradiation in vitro.; Cancer Chemother Pharmacol, [no vol.]: [no pages] |
|
GSE11618 |
| Conrad, Linus J et al. (2024) The upregulation of K+and HCN channels in developing spiral ganglion neurons is mediated by cochlear inner hair cells.; J Physiol, 602: 5329-5351 |
|
GSE242669 |
| Conrad, Ryan J et al. (2017) The Short Isoform of BRD4 Promotes HIV-1 Latency by Engaging Repressive SWI/SNF Chromatin-Remodeling Complexes.; Mol Cell, 67: 1001-1012.e6 |
|
GSE100266 |
| Conrad, Sabine et al. (2008) Generation of pluripotent stem cells from adult human testis.; Nature, 456: 344-9 |
|
GSE11350 |
| Conrad, Thomas et al. (2014) Microprocessor activity controls differential miRNA biogenesis In Vivo.; Cell Rep, 9: 542-54 |
|
GSE56862.2 |
| Conrow-Graham, Megan et al. (2022) A convergent mechanism of high risk factors ADNP and POGZ in neurodevelopmental disorders.; Brain, 145: 3250-3263 |
|
GSE188865 |
| Constantinides, Michael G et al. (2011) A naive-like population of human CD1d-restricted T cells expressing intermediate levels of promyelocytic leukemia zinc finger.; J Immunol, 187: 309-15 |
|
GSE28726 |
| Constantinides, Michael G et al. (2015) PLZF expression maps the early stages of ILC1 lineage development.; Proc Natl Acad Sci U S A, 112: 5123-8 |
|
GSE65898 |
| Constantinou, Myrianni et al. (2024) Lineage specification in glioblastoma is regulated by METTL7B.; Cell Rep, 43: 114309 |
|
GSE242328 |
| Contadini, Claudia et al. (2023) Caspase-8 as a novel mediator linking Src kinase signaling to enhanced glioblastoma malignancy.; Cell Death Differ, 30: 417-428 |
|
GSE193495 |
| Conte, Giorgia et al. (2020) High concordance between hippocampal transcriptome of the mouse intra-amygdala kainic acid model and human temporal lobe epilepsy.; Epilepsia, 61: 2795-2810 |
|
GSE122228 |
| Conteduca, Giuseppina et al. (2022) NSD1Mutations in Sotos Syndrome Induce Differential Expression of Long Noncoding RNAs, miR646 and Genes Controlling the G2/M Checkpoint.; Life (Basel), 12: [no pages] |
|
GSE204775 |
| Contento, Greg et al. (2024) Pyruvate metabolism dictates fibroblast sensitivity to GLS1 inhibition during fibrogenesis.; JCI Insight, 9: [no pages] |
|
GSE244098 |
| Conti, Laura et al. (2013) The noninflammatory role of high mobility group box 1/toll-like receptor 2 axis in the self-renewal of mammary cancer stem cells.; FASEB J, 27: 4731-44 |
|
GSE26527 GSE21451 GSE21475 |
| Conti, Sefora et al. (2024) Membrane to cortex attachment determines different mechanical phenotypes in LGR5+ and LGR5- colorectal cancer cells.; Nat Commun, 15: 3363 |
|
GSE247359 |
| Conti, Valentina et al. (2021) mTORC1 promotes malignant large cell/anaplastic histology and is a targetable vulnerability in SHH-TP53 mutant medulloblastomas.; JCI Insight, [no vol.]: [no pages] |
|
GSE183901 |
| Conway, Eric et al. (2018) A Family of Vertebrate-Specific Polycombs Encoded by the LCOR/LCORL Genes Balance PRC2 Subtype Activities.; Mol Cell, 70: 408-421.e8 |
|
GSE100679 |
| Cooke, Emmalee W et al. (2025) H3K79 methylation and H3K36 trimethylation synergistically regulate gene expression in pluripotent stem cells.; Sci Adv, 11: eadt8765 |
|
GSE292282.2 GSE292282.3 GSE292282.4 GSE292282.1 GSE292282.5 |
| Cooke, Jessica A et al. (2023) Propensity of Patient-Derived iPSCs for Retinal Differentiation: Implications for Autologous Cell Replacement.; Stem Cells Transl Med, 12: 365-378 |
|
GSE192665 |
| Cooks, Tomer et al. (2013) Mutant p53 prolongs NF-?B activation and promotes chronic inflammation and inflammation-associated colorectal cancer.; Cancer Cell, 23: 634-46 |
|
GSE43738 |
| Cool, Bethany H et al. (2010) A flanking gene problem leads to the discovery of a Gprc5b splice variant predominantly expressed in C57Bl/6J mouse brain and in maturing neurons.; PLoS One, 5: e10351 |
|
GSE14274 |
| Cooper, Fay et al. (2022) Rostrocaudal patterning and neural crest differentiation of human pre-neural spinal cord progenitors in vitro.; Stem Cell Reports, 17: 894-910 |
|
GSE150709 |
| Cooper, Kelley N et al. (2024) Limited proteolysis of neutrophil granule proteins by the bacterial protease RgpB depletes neutrophil antimicrobial capacity.; J Leukoc Biol, [no vol.]: [no pages] |
|
GSE279027 |
| Cooper-Knock, Johnathan et al. (2015) C9ORF72 GGGGCC Expanded Repeats Produce Splicing Dysregulation which Correlates with Disease Severity in Amyotrophic Lateral Sclerosis.; PLoS One, 10: e0127376 |
|
GSE68605 |
| Cootes, Taylor A et al. (2022) The quality of energy- and macronutrient-balanced diets regulates host susceptibility to influenza in mice.; Cell Rep, 41: 111638 |
|
GSE215976 |
| Copeland, Jessica N et al. (2011) Notch signaling regulates remodeling and vessel diameter in the extraembryonic yolk sac.; BMC Dev Biol, 11: 12 |
|
GSE22418 |
| Coppe, Alessandro et al. (2009) Motif discovery in promoters of genes co-localized and co-expressed during myeloid cells differentiation.; Nucleic Acids Res, 37: 533-49 |
|
GSE12803 |
| Coppiello, Giulia et al. (2015) Meox2/Tcf15 heterodimers program the heart capillary endothelium for cardiac fatty acid uptake.; Circulation, 131: 815-26 |
|
GSE48209 |
| Coppin, Hélène et al. (2007) Gene expression profiling of Hfe-/- liver and duodenum in mouse strains with differing susceptibilities to iron loading: identification of transcriptional regulatory targets of Hfe and potential hemochromatosis modifiers.; Genome Biol, 8: R221 |
|
GSE7357 |
| Coppola, David M et al. (2012) The effects of unilateral naris occlusion on gene expression profiles in mouse olfactory mucosa.; J Mol Neurosci, 47: 604-18 |
|
GSE33833 |
| Coppola, Giovanni et al. (2009) Functional genomic analysis of frataxin deficiency reveals tissue-specific alterations and identifies the PPARgamma pathway as a therapeutic target in Friedreich's ataxia.; Hum Mol Genet, 18: 2452-61 |
|
GSE15848 |
| Coppola, Giovanni et al. (2011) A gene expression phenotype in lymphocytes from Friedreich ataxia patients.; Ann Neurol, 70: 790-804 |
|
GSE30933 |
| Corbet, Andrea K et al. (2023) G0S2 promotes antiestrogenic and pro-migratory responses in ER+ and ER- breast cancer cells.; Transl Oncol, 33: 101676 |
|
GSE227698 |
| Corbett, Sean E et al. (2019) Gene Expression Alterations in the Bronchial Epithelium of e-Cigarette Users.; Chest, 156: 764-773 |
|
GSE112073 |
| Cordeaux, Yolande et al. (2010) Effects of medroxyprogesterone acetate on gene expression in myometrial explants from pregnant women.; J Clin Endocrinol Metab, 95: E437-47 |
|
GSE22961 |
| Cordeiro, Brendan et al. (2024) Obesity intensifies sex-specific interferon signaling to selectively worsen central nervous system autoimmunity in females.; Cell Metab, 36: 2298-2314.e11 |
|
GSE241044 |
| Cordonnier, Gaëlle et al. (2020) CBFβ-SMMHC Affects Genome-wide Polycomb Repressive Complex 1 Activity in Acute Myeloid Leukemia.; Cell Rep, 30: 299-307.e3 |
|
GSE128771 |
| Cordova, Ricardo A et al. (2024) Coordination between the eIF2 kinase GCN2 and p53 signaling supports purine metabolism and the progression of prostate cancer.; Sci Signal, 17: eadp1375 |
|
GSE260934 |
| Corley, Susan M et al. (2016) RNA-Seq analysis of Gtf2ird1 knockout epidermal tissue provides potential insights into molecular mechanisms underpinning Williams-Beuren syndrome.; BMC Genomics, 17: 450 |
|
GSE81082 |
| Cornelissen, Fleur M G et al. (2025) The translatome of glioblastoma.; Mol Oncol, 19: 716-740 |
|
GSE229866 |
| Cornils, Hauke et al. (2010) Ablation of the kinase NDR1 predisposes mice to the development of T cell lymphoma.; Sci Signal, 3: ra47 |
|
GSE21902 |
| Cornish, E Jean et al. (2008) Reduced nicotinamide adenine dinucleotide phosphate oxidase-independent resistance to Aspergillus fumigatus in alveolar macrophages.; J Immunol, 180: 6854-67 |
|
GSE8997 |
| Corno, Daniela et al. (2012) Gene signatures associated with mouse postnatal hindbrain neural stem cells and medulloblastoma cancer stem cells identify novel molecular mediators and predict human medulloblastoma molecular classification.; Cancer Discov, 2: 554-68 |
|
GSE37316 |
| Cornuti, Sara et al. (2023) Brain histone beta-hydroxybutyrylation couples metabolism with gene expression.; Cell Mol Life Sci, 80: 28 |
|
GSE168724 |
| Coronado, Michael J et al. (2012) Testosterone and interleukin-1? increase cardiac remodeling during coxsackievirus B3 myocarditis via serpin A 3n.; Am J Physiol Heart Circ Physiol, 302: H1726-36 |
|
GSE35182 |
| Coronel, Raquel et al. (2023) Amyloid Precursor Protein (APP) Regulates Gliogenesis and Neurogenesis of Human Neural Stem Cells by Several Signaling Pathways.; Int J Mol Sci, 24: [no pages] |
|
GSE233651 |
| Corradini, Beatriz Raposo et al. (2014) Complex network-driven view of genomic mechanisms underlying Parkinson's disease: analyses in dorsal motor vagal nucleus, locus coeruleus, and substantia nigra.; Biomed Res Int, 2014: 543673 |
|
GSE43490 |
| Corrales, Eyleen et al. (2022) PI3K/AKT signaling allows for MAPK/ERK pathway independency mediating dedifferentiation-driven treatment resistance in melanoma.; Cell Commun Signal, 20: 187 |
|
GSE208004 |
| Correa Pinto Junior, Danilo et al. (2024) Osteocalcin of maternal and embryonic origins synergize to establish homeostasis in offspring.; EMBO Rep, 25: 593-615 |
|
GSE248211 |
| Correa, Stephanie M et al. (2015) An estrogen-responsive module in the ventromedial hypothalamus selectively drives sex-specific activity in females.; Cell Rep, 10: 62-74 |
|
GSE63656 |
| Correa-Costa, Matheus et al. (2012) Transcriptome analysis of renal ischemia/reperfusion injury and its modulation by ischemic pre-conditioning or hemin treatment.; PLoS One, 7: e49569 |
|
GSE39548 |
| Correa-Macedo, Wilian et al. (2024) Transcriptome immune-regulatory differences between leprosy patients and type 1 reaction patients, before onset of symptoms.; PLoS Negl Trop Dis, 18: e0011866 |
|
GSE269151 |