List of all 16,774 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Dekervel, Jeroen et al. (2017) Acriflavine Inhibits Acquired Drug Resistance by Blocking the Epithelial-to-Mesenchymal Transition and the Unfolded Protein Response.; Transl Oncol, 10: 59-69 |
|
GSE82293 |
| Dekker, Pim et al. (2012) Microarray-based identification of age-dependent differences in gene expression of human dermal fibroblasts.; Mech Ageing Dev, 133: 498-507 |
|
GSE28300 |
| Del Blanco, Beatriz et al. (2019) CBP and SRF co-regulate dendritic growth and synaptic maturation.; Cell Death Differ, [no vol.]: [no pages] |
|
GSE118248 |
| Del Blanco, Beatriz et al. (2024) Kdm1a safeguards the topological boundaries of PRC2-repressed genes and prevents aging-related euchromatinization in neurons.; Nat Commun, 15: 1781 |
|
GSE236182 |
| Del Bondio, Andrea et al. (2023) Restoring calcium homeostasis in Purkinje cells arrests neurodegeneration and neuroinflammation in the ARSACS mouse model.; JCI Insight, 8: [no pages] |
|
GSE200876 |
| del Fresno, Carlos et al. (2009) Potent phagocytic activity with impaired antigen presentation identifying lipopolysaccharide-tolerant human monocytes: demonstration in isolated monocytes from cystic fibrosis patients.; J Immunol, 182: 6494-507 |
|
GSE15219 |
| Del Giudice, Ilaria et al. (2009) Spontaneous regression of chronic lymphocytic leukemia: clinical and biologic features of 9 cases.; Blood, 114: 638-46 |
|
GSE15777 |
| Del Mármol, Josefina Inés et al. [Unknown date]Piezo1 forms a slowly-inactivating mechanosensory channel in mouse embryonic stem cells.; Elife, 7: [no pages] |
|
GSE106526 |
| Del Olmo, Marta et al. (2022) Inter-layer and inter-subject variability of diurnal gene expression in human skin.; NAR Genom Bioinform, 4: lqac097 |
|
GSE205155 |
| Del Rey, Manuel J et al. (2010) The transcriptional response of normal and rheumatoid arthritis synovial fibroblasts to hypoxia.; Arthritis Rheum, 62: 3584-94 |
|
GSE21959 |
| Del Rey, Manuel J et al. (2012) Transcriptome analysis reveals specific changes in osteoarthritis synovial fibroblasts.; Ann Rheum Dis, 71: 275-80 |
|
GSE29746 |
| Del Rio, Maguy et al. (2013) Specific extracellular matrix remodeling signature of colon hepatic metastases.; PLoS One, 8: e74599 |
|
GSE49355 |
| Dela Peña, Ike et al. (2013) Neuronal development genes are key elements mediating the reinforcing effects of methamphetamine, amphetamine, and methylphenidate.; Psychopharmacology (Berl), 230: 399-413 |
|
GSE43748 |
| Delaleu, Nicolas et al. (2013) Transcriptional landscapes of emerging autoimmunity: transient aberrations in the targeted tissue's extracellular milieu precede immune responses in Sjögren's syndrome.; Arthritis Res Ther, 15: R174 |
|
GSE36378 |
| Delaney, Tracy A et al. (2016) Type I IFNs Regulate Inflammation, Vasculopathy, and Fibrosis in Chronic Cutaneous Graft-versus-Host Disease.; J Immunol, 197: 42-50 |
|
GSE79194 |
| Delbridge, Alex R D et al. (2020) Organotypic Brain Slice Culture Microglia Exhibit Molecular Similarity to Acutely-Isolated Adult Microglia and Provide a Platform to Study Neuroinflammation.; Front Cell Neurosci, 14: 592005 |
|
GSE154853 |
| Delbridge, Alex R D et al. [Unknown date]Loss of p53 Causes Stochastic Aberrant X-Chromosome Inactivation and Female-Specific Neural Tube Defects.; Cell Rep, 27: 442-454.e5 |
|
GSE127446 |
| Delbès, Anne-Sophie et al. (2023) Mice with humanized livers reveal the role of hepatocyte clocks in rhythmic behavior.; Sci Adv, 9: eadf2982 |
|
GSE212079 |
| Delconte, Rebecca B et al. (2016) The Helix-Loop-Helix Protein ID2 Governs NK Cell Fate by Tuning Their Sensitivity to Interleukin-15.; Immunity, 44: 103-115 |
|
GSE76466 |
| Delday, Margaret et al. (2019) Bacteroides thetaiotaomicron Ameliorates Colon Inflammation in Preclinical Models of Crohn's Disease.; Inflamm Bowel Dis, 25: 85-96 |
|
GSE118524 |
| Delekta, Phillip C et al. (2014) Novel indole-2-carboxamide compounds are potent broad-spectrum antivirals active against western equine encephalitis virus in vivo.; J Virol, 88: 11199-214 |
|
GSE51909 |
| Delgado, Camila et al. (2021) Neural cell adhesion molecule is required for ventricular conduction system development.; Development, 148: [no pages] |
|
GSE172267 |
| Delgado, Oliver et al. (2014) Radiation-enhanced lung cancer progression in a transgenic mouse model of lung cancer is predictive of outcomes in human lung and breast cancer.; Clin Cancer Res, 20: 1610-22 |
|
GSE42233 |
| Delgado-Olguín, Paul et al. (2012) Epigenetic repression of cardiac progenitor gene expression by Ezh2 is required for postnatal cardiac homeostasis.; Nat Genet, 44: 343-7 |
|
GSE30076 |
| Deliu, Elena et al. [Unknown date]Haploinsufficiency of the intellectual disability gene SETD5 disturbs developmental gene expression and cognition.; Nat Neurosci, 21: 1717-1727 |
|
GSE119498 |
| Delker, Don A et al. (2014) RNA sequencing of sessile serrated colon polyps identifies differentially expressed genes and immunohistochemical markers.; PLoS One, 9: e88367 |
|
GSE46513 |
| Dell'Anno, Maria Teresa et al. (2018) Human neuroepithelial stem cell regional specificity enables spinal cord repair through a relay circuit.; Nat Commun, 9: 3419 |
|
GSE107514 |
| Dell'Orco, Michela et al. (2023) Repetitive Spreading Depolarization induces gene expression changes related to synaptic plasticity and neuroprotective pathways.; bioRxiv, [no vol.]: [no pages] |
|
GSE214623 |
| Della Valle, Ilaria et al. (2024) Loss of homeostatic functions in microglia from a murine model of Friedreich's ataxia.; Genes Dis, 11: 101178 |
|
GSE232826 |
| Delmore, Jake E et al. (2011) BET bromodomain inhibition as a therapeutic strategy to target c-Myc.; Cell, 146: 904-17 |
|
GSE31365 |
| Delorme, Bruno et al. (2010) The human nose harbors a niche of olfactory ectomesenchymal stem cells displaying neurogenic and osteogenic properties.; Stem Cells Dev, 19: 853-66 |
|
GSE24598 |
| Delp, Johannes et al. (2017) Stage-specific metabolic features of differentiating neurons: Implications for toxicant sensitivity.; Toxicol Appl Pharmacol, [no vol.]: [no pages] |
|
GSE107999 |
| Delvalle, Ninotchska M et al. (2018) Communication Between Enteric Neurons, Glia, and Nociceptors Underlies the Effects of Tachykinins on Neuroinflammation.; Cell Mol Gastroenterol Hepatol, 6: 321-344 |
|
GSE114780 |
| Delyfer, Marie-Noëlle et al. (2011) Transcriptomic analysis of human retinal detachment reveals both inflammatory response and photoreceptor death.; PLoS One, 6: e28791 |
|
GSE28133 |
| Delys, L et al. (2007) Gene expression and the biological phenotype of papillary thyroid carcinomas.; Oncogene, 26: 7894-903 |
|
GSE3950 |
| Delás, M Joaquina et al. (2017) lncRNA requirements for mouse acute myeloid leukemia and normal differentiation.; Elife, 6: [no pages] |
|
GSE90059 |
| Delás, M Joaquina et al. (2023) Developmental cell fate choice in neural tube progenitors employs two distinct cis-regulatory strategies.; Dev Cell, 58: 3-17.e8 |
|
GSE204920 |
| Delépine, Chloé et al. (2015) Astrocyte Transcriptome from the Mecp2(308)-Truncated Mouse Model of Rett Syndrome.; Neuromolecular Med, 17: 353-63 |
|
GSE56709 |
| Demais, Valérie et al. [Unknown date]Reversal of Pathologic Lipid Accumulation in NPC1-Deficient Neurons by Drug-Promoted Release of LAMP1-Coated Lamellar Inclusions.; J Neurosci, 36: 8012-25 |
|
GSE75775 |
| Demaria, Marco et al. (2010) A STAT3-mediated metabolic switch is involved in tumour transformation and STAT3 addiction.; Aging (Albany NY), 2: 823-42 |
|
GSE21507 |
| Demeure, Michael J et al. (2013) PTTG1 overexpression in adrenocortical cancer is associated with poor survival and represents a potential therapeutic target.; Surgery, 154: 1405-16 |
|
GSE19750 |
| Demin, Konstantin A et al. (2022) Evolutionarily conserved gene expression patterns for affective disorders revealed using cross-species brain transcriptomic analyses in humans, rats and zebrafish.; Sci Rep, 12: 20836 |
|
GSE205325 |
| Demirel, Eda et al. (2021) RGS5 Attenuates Baseline Activity of ERK1/2 and Promotes Growth Arrest of Vascular Smooth Muscle Cells.; Cells, 10: [no pages] |
|
GSE174130 |
| Demmer, Ryan T et al. (2008) Transcriptomes in healthy and diseased gingival tissues.; J Periodontol, 79: 2112-24 |
|
GSE10334 |
| Den Boer, Monique L et al. (2009) A subtype of childhood acute lymphoblastic leukaemia with poor treatment outcome: a genome-wide classification study.; Lancet Oncol, 10: 125-34 |
|
GSE13351 GSE13425 |
| Denaxa, Myrto et al. (2018) Modulation of Apoptosis Controls Inhibitory Interneuron Number in the Cortex.; Cell Rep, 22: 1710-1721 |
|
GSE108161 |
| Dendoncker, Karen et al. (2019) TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile.; Proc Natl Acad Sci U S A, 116: 12942-12951 |
|
GSE124088 |
| Deneault, Eric et al. [Unknown date]Complete Disruption of Autism-Susceptibility Genes by Gene Editing Predominantly Reduces Functional Connectivity of Isogenic Human Neurons.; Stem Cell Reports, 11: 1211-1225 |
|
GSE107878 |
| Deng, Daiyong et al. (2024) NFAT5 governs cellular plasticity-driven resistance to KRAS-targeted therapy in pancreatic cancer.; J Exp Med, 221: [no pages] |
|
GSE252836 |
| Deng, Junhao et al. (2023) Early-phase rotator training impairs tissue repair and functional recovery after spinal cord injury.; Heliyon, 9: e18158 |
|
GSE193806 |
| Deng, Kaicheng et al. (2023) A biodegradable, flexible photonic patch for in vivo phototherapy.; Nat Commun, 14: 3069 |
|
GSE223691 |
| Deng, Lunbin et al. (2023) Nav1.7 is essential for nociceptor action potentials in the mouse in a manner independent of endogenous opioids.; Neuron, 111: 2642-2659.e13 |
|
GSE213826 |
| Deng, Qing et al. (2024) SMARCA4 is a haploinsufficient B cell lymphoma tumor suppressor that fine-tunes centrocyte cell fate decisions.; Cancer Cell, 42: 605-622.e11 |
|
GSE254897 |
| Deng, Ruizhi et al. (2023) AMFR dysfunction causes autosomal recessive spastic paraplegia in human that is amenable to statin treatment in a preclinical model.; Acta Neuropathol, [no vol.]: [no pages] |
|
GSE202141 |
| Deng, Tao et al. (2013) HMGN1 modulates nucleosome occupancy and DNase I hypersensitivity at the CpG island promoters of embryonic stem cells.; Mol Cell Biol, 33: 3377-89 |
|
GSE44175 |
| Deng, Tao et al. (2015) Functional compensation among HMGN variants modulates the DNase I hypersensitive sites at enhancers.; Genome Res, 25: 1295-308 |
|
GSE66442 |
| Deng, Tingting et al. (2024) Toe1 promotes proliferation and differentiation of neural progenitor cells.; Heliyon, 10: e39535 |
|
GSE254609 GSE254608 |
| Deng, Tuo et al. (2013) Class II major histocompatibility complex plays an essential role in obesity-induced adipose inflammation.; Cell Metab, 17: 411-22 |
|
GSE44000 |
| Deng, Vivianne et al. (2007) FXYD1 is an MeCP2 target gene overexpressed in the brains of Rett syndrome patients and Mecp2-null mice.; Hum Mol Genet, 16: 640-50 |
|
GSE6955 |
| Deng, Wenjun et al. (2020) Transcriptomic characterization of microglia activation in a rat model of ischemic stroke.; J Cereb Blood Flow Metab, 40: S34-S48 |
|
GSE148350.2 GSE148350.1 |
| Deng, Wenxiang et al. (2023) Analysis of the mechanism of curcumin against osteoarthritis using metabolomics and transcriptomics.; Naunyn Schmiedebergs Arch Pharmacol, [no vol.]: [no pages] |
|
GSE243421 |
| Deng, Xiaoqian et al. (2022) Global Transcriptional and Epigenetic Reconfiguration during Chemical Reprogramming of Human Retinal Pigment Epithelial Cells into Photoreceptor-like Cells.; Cells, 11: [no pages] |
|
GSE192881 |
| Deng, Xinxian et al. (2011) Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster.; Nat Genet, 43: 1179-85 |
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GSE30567.1 GSE22131 GSE16921 GSE30567.3 |
| Deng, Yaqi et al. (2017) A reciprocal regulatory loop between TAZ/YAP and G-protein G?s regulates Schwann cell proliferation and myelination.; Nat Commun, 8: 15161 |
|
GSE94990.1 |
| Deng, Ying-Bing et al. (2010) Identification of genes preferentially methylated in hepatitis C virus-related hepatocellular carcinoma.; Cancer Sci, 101: 1501-10 |
|
GSE19665 |
| Deng, Yingfeng et al. (2013) The Xbp1s/GalE axis links ER stress to postprandial hepatic metabolism.; J Clin Invest, 123: 455-68 |
|
GSE39301 |
| Deng, Youping et al. (2010) In vitro gene regulatory networks predict in vivo function of liver.; BMC Syst Biol, 4: 153 |
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GSE19662 GSE19628 |
| Denis, Jérôme Alexandre et al. (2011) Global transcriptional profiling of neural and mesenchymal progenitors derived from human embryonic stem cells reveals alternative developmental signaling pathways.; Stem Cells Dev, 20: 1395-409 |
|
GSE8590 |
| Denk, Franziska et al. (2013) HDAC inhibitors attenuate the development of hypersensitivity in models of neuropathic pain.; Pain, 154: 1668-79 |
|
GSE51295 GSE51294 |
| Denk, Franziska et al. [Unknown date]Persistent Alterations in Microglial Enhancers in a Model of Chronic Pain.; Cell Rep, 15: 1771-81 |
|
GSE71133 |
| Denkena, Johanna et al. (2020) Neuronal activity regulates alternative exon usage.; Mol Brain, 13: 148 |
|
GSE148028 |
| Denkert, Carsten et al. (2009) A prognostic gene expression index in ovarian cancer - validation across different independent data sets.; J Pathol, 218: 273-80 |
|
GSE14764 |
| Denninger, Jiyeon K et al. (2022) Robust Transcriptional Profiling and Identification of Differentially Expressed Genes With Low Input RNA Sequencing of Adult Hippocampal Neural Stem and Progenitor Populations.; Front Mol Neurosci, 15: 810722 |
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GSE189572 GSE189574 |
| Dennison, Kirsten L et al. (2018) Ept7, a quantitative trait locus that controls estrogen-induced pituitary lactotroph hyperplasia in rat, is orthologous to a locus in humans that has been associated with numerous cancer types and common diseases.; PLoS One, 13: e0204727 |
|
GSE4028 |
| Denny, Sarah K et al. (2016) Nfib Promotes Metastasis through a Widespread Increase in Chromatin Accessibility.; Cell, 166: 328-342 |
|
GSE81257 |
| Denzler, Rémy et al. (2014) Assessing the ceRNA hypothesis with quantitative measurements of miRNA and target abundance.; Mol Cell, 54: 766-76 |
|
GSE52801 |
| Deonaraine, Kristina K et al. (2020) Sex-specific peripheral and central responses to stress-induced depression and treatment in a mouse model.; J Neurosci Res, 98: 2541-2553 |
|
GSE146845 |
| Depke, Maren et al. (2012) The alternative sigma factor B modulates virulence gene expression in a murine Staphylococcus aureus infection model but does not influence kidney gene expression pattern of the host.; Int J Med Microbiol, 302: 33-9 |
|
GSE28540 |
| Depner, Christopher M et al. (2013) Docosahexaenoic acid attenuates hepatic inflammation, oxidative stress, and fibrosis without decreasing hepatosteatosis in a Ldlr(-/-) mouse model of western diet-induced nonalcoholic steatohepatitis.; J Nutr, 143: 315-23 |
|
GSE215224 |
| Deppmann, Christopher D et al. (2008) A model for neuronal competition during development.; Science, 320: 369-73 |
|
GSE10498 |
| Der, Sandy D et al. (2014) Validation of a histology-independent prognostic gene signature for early-stage, non-small-cell lung cancer including stage IA patients.; J Thorac Oncol, 9: 59-64 |
|
GSE50081 |
| Derbinski, Jens et al. (2005) Promiscuous gene expression in thymic epithelial cells is regulated at multiple levels.; J Exp Med, 202: 33-45 |
|
GSE2585 |
| DeRosa, Brooke A et al. (2018) Convergent Pathways in Idiopathic Autism Revealed by Time Course Transcriptomic Analysis of Patient-Derived Neurons.; Sci Rep, 8: 8423 |
|
GSE124308 |
| Derosa, C A et al. (2012) Elevated osteonectin/SPARC expression in primary prostate cancer predicts metastatic progression.; Prostate Cancer Prostatic Dis, 15: 210 |
|
GSE32448 |
| Derrick, Tamsyn et al. (2019) The conjunctival transcriptome in Ethiopians after trichiasis surgery: associations with the development of eyelid contour abnormalities and the effect of oral doxycycline treatment.; Wellcome Open Res, 4: 130 |
|
GSE135455 |
| Derti, Adnan et al. (2012) A quantitative atlas of polyadenylation in five mammals.; Genome Res, 22: 1173-83 |
|
GSE30198.4 GSE30198.2 |
| Deryckere, Astrid et al. (2020) Multifaceted actions of Zeb2 in postnatal neurogenesis from the ventricular-subventricular zone to the olfactory bulb.; Development, 147: [no pages] |
|
GSE103003 |
| Desai, Aditi et al. (2009) Microarray-based characterization of a colony assay used to investigate endothelial progenitor cells and relevance to endothelial function in humans.; Arterioscler Thromb Vasc Biol, 29: 121-7 |
|
GSE12155 |
| Desai, Ankit A et al. (2012) A novel molecular signature for elevated tricuspid regurgitation velocity in sickle cell disease.; Am J Respir Crit Care Med, 186: 359-68 |
|
GSE38528 |
| Desai, Kinjal et al. (2025) OLIG2 mediates a rare targetable stem cell fate transition in sonic hedgehog medulloblastoma.; Nat Commun, 16: 1092 |
|
GSE234105 |