List of all 22,542 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Dillard, Clémentine et al. (2021) Expression Pattern of Purinergic Signaling Components in Colorectal Cancer Cells and Differential Cellular Outcomes Induced by Extracellular ATP and Adenosine.; Int J Mol Sci, 22: [no pages] |
|
GSE185055 |
| Dillman, Allissa A et al. (2013) mRNA expression, splicing and editing in the embryonic and adult mouse cerebral cortex.; Nat Neurosci, 16: 499-506 |
|
GSE39866 |
| Dillman, Allissa A et al. (2016) ADAR2 affects mRNA coding sequence edits with only modest effects on gene expression or splicing in vivo.; RNA Biol, 13: 15-24 |
|
GSE70588 |
| Dillman, James F et al. (2004) Genomic analysis of rodent pulmonary tissue following bis-(2-chloroethyl) sulfide exposure.; Chem Res Toxicol, 18: 28-34 |
|
GSE1888 |
| Dillman, James F et al. (2006) Microarray analysis of mouse ear tissue exposed to bis-(2-chloroethyl) sulfide: gene expression profiles correlate with treatment efficacy and an established clinical endpoint.; J Pharmacol Exp Ther, 317: 76-87 |
|
GSE2950 |
| Dillman, James F et al. (2009) Gene expression profiling of rat hippocampus following exposure to the acetylcholinesterase inhibitor soman.; Chem Res Toxicol, 22: 633-8 |
|
GSE13428 |
| Dillon, Gregory M et al. (2017) CLASP2 Links Reelin to the Cytoskeleton during Neocortical Development.; Neuron, 93: 1344-1358.e5 |
|
GSE94896 |
| Dilruba, Shahana et al. (2020) Non-Phosphorylatable PEA-15 Sensitises SKOV-3 Ovarian Cancer Cells to Cisplatin.; Cells, 9: [no pages] |
|
GSE144041 |
| Dimas, Antigone S et al. (2009) Common regulatory variation impacts gene expression in a cell type-dependent manner.; Science, 325: 1246-50 |
|
GSE17080 |
| Dimas, Penelope et al. (2019) CNS myelination and remyelination depend on fatty acid synthesis by oligodendrocytes.; Elife, 8: [no pages] |
|
GSE112725 |
| DiMenna, Lauren J et al. (2017) Cutting Edge: The Transcription Factor Sox2 Regulates AID Expression in Class-Switched B Cells.; J Immunol, 198: 2244-2248 |
|
GSE93131 |
| Dimitriadis, Athanasios et al. (2022) Single-nuclei transcriptomics of mammalian prion diseases identifies dynamic gene signatures shared between species; bioRxiv, [no vol.]: [no pages] |
|
GSE214373 |
| Dimitrova, L et al. (2014) PAX5 overexpression is not enough to reestablish the mature B-cell phenotype in classical Hodgkin lymphoma.; Leukemia, 28: 213-6 |
|
GSE44244 |
| Dimitrova, Nadya et al. (2014) LincRNA-p21 activates p21 in cis to promote Polycomb target gene expression and to enforce the G1/S checkpoint.; Mol Cell, 54: 777-90 |
|
GSE52957 |
| Dinamarca, Margarita C et al. (2016) Ring finger protein 10 is a novel synaptonuclear messenger encoding activation of NMDA receptors in hippocampus.; Elife, 5: e12430 |
|
GSE69267 |
| Dincer, A et al. (2015) Deciphering H3K4me3 broad domains associated with gene-regulatory networks and conserved epigenomic landscapes in the human brain.; Transl Psychiatry, 5: e679 |
|
GSE72930 |
| Dincer, Zehra et al. (2013) Specification of functional cranial placode derivatives from human pluripotent stem cells.; Cell Rep, 5: 1387-402 |
|
GSE51533 |
| Ding, Chaodong et al. (2021) Transcription factor POU3F2 regulates TRIM8 expression contributing to cellular functions implicated in schizophrenia.; Mol Psychiatry, 26: 3444-3460 |
|
GSE143692 |
| Ding, Donglin et al. (2023) Gain-of-function mutant p53 together with ERG proto-oncogene drive prostate cancer by beta-catenin activation and pyrimidine synthesis.; Nat Commun, 14: 4671 |
|
GSE184624 GSE184625 |
| Ding, Feng et al. (2010) Neonatal maternal deprivation response and developmental changes in gene expression revealed by hypothalamic gene expression profiling in mice.; PLoS One, 5: e9402 |
|
GSE14984 |
| Ding, Guolian et al. (2021) Author Correction: REV-ERB in GABAergic neurons controls diurnal hepatic insulin sensitivity.; Nature, 595: E2 |
|
GSE150840 |
| Ding, Junfeng et al. (2025) Chiral polypeptide hydrogels regulating local immune microenvironment and anti-tumor immune response.; Nat Commun, 16: 1222 |
|
GSE261299 |
| Ding, Li et al. (2008) Somatic mutations affect key pathways in lung adenocarcinoma.; Nature, 455: 1069-75 |
|
GSE12667 |
| Ding, Liang-Hao et al. (2013) Distinct transcriptome profiles identified in normal human bronchial epithelial cells after exposure to ?-rays and different elemental particles of high Z and energy.; BMC Genomics, 14: 372 |
|
GSE44282 |
| Ding, Lina et al. (2019) Perturbed myoepithelial cell differentiation in BRCA mutation carriers and in ductal carcinoma in situ.; Nat Commun, 10: 4182 |
|
GSE113909 |
| Ding, Meijie et al. (2024) TAF15 Overexpression Impairs Memory in Mice by Inhibiting the Transcription of Npas4.; Neurosci Bull, 40: 1937-1942 |
|
GSE244954 |
| Ding, Ning et al. (2015) Irreversible dual inhibitory mode: the novel Btk inhibitor PLS-123 demonstrates promising anti-tumor activity in human B-cell lymphoma.; Oncotarget, 6: 15122-36 |
|
GSE65817 GSE65816 |
| Ding, Peng et al. (2025) RIPK4-mediated MFN2 degradation drives osteogenesis through mitochondrial fragmentation and restricts myelopoiesis by blocking mitochondrial transfer.; Nat Commun, 16: 6666 |
|
GSE243610 |
| Ding, Peng-Li et al. (2024) Temporal Effects of Disease Signature Genes and Core Mechanisms in the Hyperacute Phase of Acute Ischemic Stroke: A Bioinformatics Analysis and Experimental Validation.; Mediators Inflamm, 2025: 6808184 |
|
GSE279377 |
| Ding, Qi et al. (2020) Transcriptome signature analysis repurposes trifluoperazine for the treatment of fragile X syndrome in mouse model.; Commun Biol, 3: 127 |
|
GSE114015 |
| Ding, Rui et al. (2024) Sequential transcriptomic alterations in the cerebral cortex of mice after cerebral venous sinus thrombosis.; J Proteomics, 291: 105035 |
|
GSE245455 |
| Ding, Ruifeng et al. (2022) Calcitriol ameliorates damage in high-salt diet-induced hypertension: Evidence of communication with the gut-kidney axis.; Exp Biol Med (Maywood), 247: 624-640 |
|
GSE184844 |
| Ding, Shihui et al. (2023) Dynamic RBM47 ISGylation confers broad immunoprotection against lung injury and tumorigenesis via TSC22D3 downregulation.; Cell Death Discov, 9: 430 |
|
GSE218940 |
| Ding, Song et al. (2021) CHD8 safeguards early neuroectoderm differentiation in human ESCs and protects from apoptosis during neurogenesis.; Cell Death Dis, 12: 981 |
|
GSE171869 |
| Ding, Wei et al. (2010) Epithelial-to-mesenchymal transition of murine liver tumor cells promotes invasion.; Hepatology, 52: 945-53 |
|
GSE18255 |
| Ding, Weihua et al. (2023) Highly synchronized cortical circuit dynamics mediate spontaneous pain in mice.; J Clin Invest, 133: [no pages] |
|
GSE162284 |
| Ding, Wenyu et al. (2021) Loss of the centrosomal protein Cenpj leads to dysfunction of the hypothalamus and obesity in mice.; Sci China Life Sci, 64: 419-433 |
|
GSE139640 |
| Ding, Xiaolei et al. (2012) Polycomb group protein Bmi1 promotes hematopoietic cell development from embryonic stem cells.; Stem Cells Dev, 21: 121-32 |
|
GSE20958 |
| Ding, Xiaoyun et al. (2024) Age-dependent regulation of axoglial interactions and behavior by oligodendrocyte AnkyrinG.; Nat Commun, 15: 10865 |
|
GSE263546 |
| Ding, Xinlu et al. (2017) Activity-induced histone modifications govern Neurexin-1 mRNA splicing and memory preservation.; Nat Neurosci, 20: 690-699 |
|
GSE93682 |
| Ding, Yonghe et al. (2022) A phenotype-based forward genetic screen identifiesDnajb6as a sick sinus syndrome gene.; Elife, 11: [no pages] |
|
GSE195953 |
| Ding, Yunfeng et al. (2025) ETV2 Overexpression Promotes Efficient Differentiation of Pluripotent Stem Cells to Endothelial Cells.; Biotechnol Bioeng, 122: 1914-1928 |
|
GSE271101 |
| Ding, Zeng et al. (2025) SFRS8 Regulates Memory by Modulating RNA Splicing of Synaptic Genes.; Mol Neurobiol, [no vol.]: [no pages] |
|
GSE273869 |
| Dingare, Chaitanya et al. (2024) Mannose controls mesoderm specification and symmetry breaking in mouse gastruloids.; Dev Cell, [no vol.]: [no pages] |
|
GSE236887 |
| Dingledine, Raymond et al. (2017) Transcriptional profile of hippocampal dentate granule cells in four rat epilepsy models.; Sci Data, 4: 170061 |
|
GSE47752 |
| Dinh, Quynh Nhu et al. (2024) Human amnion epithelial cell therapy reduces hypertension-induced vascular stiffening and cognitive impairment.; Sci Rep, 14: 1837 |
|
GSE248059 |
| Dinh, Quynh Nhu et al. (2025) Hypertension promotes neuroinflammation, brain injury and cognitive impairment.; Brain Behav Immun Health, 48: 101059 |
|
GSE261492 |
| Dinsmore, Colin J et al. (2022) Differential regulation of cranial and cardiac neural crest by serum response factor and its cofactors.; Elife, 11: [no pages] |
|
GSE186770 |
| Diodato, Assunta et al. (2016) Molecular signatures of neural connectivity in the olfactory cortex.; Nat Commun, 7: 12238 |
|
GSE70800 |
| Dion-Albert, Laurence et al. (2022) Vascular and blood-brain barrier-related changes underlie stress responses and resilience in female mice and depression in human tissue.; Nat Commun, 13: 164 |
|
GSE173797 GSE173795 GSE182671 GSE173796 GSE173794 |
| Dionisio-Santos, Dawling A et al. (2021) Evaluating Effects of Glatiramer Acetate Treatment on Amyloid Deposition and Tau Phosphorylation in the 3xTg Mouse Model of Alzheimer's Disease.; Front Neurosci, 15: 758677 |
|
GSE169216 |
| Diotallevi, Marina et al. (2017) Glutathione Fine-Tunes the Innate Immune Response toward Antiviral Pathways in a Macrophage Cell Line Independently of Its Antioxidant Properties.; Front Immunol, 8: 1239 |
|
GSE79397 |
| Dippold, Rachael P et al. (2012) Chronic ethanol feeding enhances miR-21 induction during liver regeneration while inhibiting proliferation in rats.; Am J Physiol Gastrointest Liver Physiol, 303: G733-43 |
|
GSE33785 |
| Direnberger, Stephan et al. (2012) Biocompatibility of a genetically encoded calcium indicator in a transgenic mouse model.; Nat Commun, 3: 1031 |
|
GSE39632 |
| Direnzo, Daniel et al. (2012) Induced Mist1 expression promotes remodeling of mouse pancreatic acinar cells.; Gastroenterology, [no vol.]: [no pages] |
|
GSE34232 |
| Dirr, Elliott W et al. (2023) Subdiaphragmatic vagal nerve stimulation attenuates the development of hypertension and alters nucleus of the solitary tract transcriptional networks in the spontaneously hypertensive rat.; Physiol Genomics, 55: 606-617 |
|
GSE189615 |
| Dirscherl, Konstantin et al. (2010) Luteolin triggers global changes in the microglial transcriptome leading to a unique anti-inflammatory and neuroprotective phenotype.; J Neuroinflammation, 7: 3 |
|
GSE18740 |
| DiSabato, Damon J et al. (2020) Interleukin-1 receptor on hippocampal neurons drives social withdrawal and cognitive deficits after chronic social stress.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE149195 |
| Dischinger, Ulrich et al. (2021) Roux-en-Y Gastric Bypass and Caloric Restriction but Not Gut Hormone-Based Treatments Profoundly Impact the Hypothalamic Transcriptome in Obese Rats.; Nutrients, 14: [no pages] |
|
GSE190218 |
| Dissanayake, Lashodya V et al. (2024) The presence of xanthine dehydrogenase is crucial for the maturation of the rat kidneys.; Clin Sci (Lond), 138: 269-288 |
|
GSE239437 |
| Distasi, C et al. (2018) SiO2nanoparticles modulate the electrical activity of neuroendocrine cells without exerting genomic effects.; Sci Rep, 8: 2760 |
|
GSE98032 |
| DiStefano, Tyler et al. (2018) Accelerated and Improved Differentiation of Retinal Organoids from Pluripotent Stem Cells in Rotating-Wall Vessel Bioreactors.; Stem Cell Reports, 10: 300-313 |
|
GSE102727 |
| Distler, Margaret G et al. (2012) Glyoxalase 1 increases anxiety by reducing GABAA receptor agonist methylglyoxal.; J Clin Invest, 122: 2306-15 |
|
GSE36819 |
| Distrutti, Eleonora et al. (2014) Modulation of intestinal microbiota by the probiotic VSL#3 resets brain gene expression and ameliorates the age-related deficit in LTP.; PLoS One, 9: e106503 |
|
GSE51381 |
| Ditewig, Amy C et al. (2014) Enrichment with wood blocks does not affect toxicity assessment in an exploratory toxicology model using Sprague-Dawley rats.; J Am Assoc Lab Anim Sci, 53: 246-60 |
|
GSE48407.1 GSE48407.2 |
| Dittmann, Nicole L et al. (2023) Culture Protocol and Transcriptomic Analysis of Murine SVZ NPCs and OPCs.; Stem Cell Rev Rep, [no vol.]: [no pages] |
|
GSE217507 |
| Divya, Thulasi Sheela et al. (2016) Regulation of Tlx3 by Pax6 is required for the restricted expression of Chrnα3 in Cerebellar Granule Neuron progenitors during development.; Sci Rep, 6: 30337 |
|
GSE82097 |
| Dixit, Deobrat et al. (2022) Glioblastoma stem cells reprogram chromatin in vivo to generate selective therapeutic dependencies on DPY30 and phosphodiesterases.; Sci Transl Med, 14: eabf3917 |
|
GSE185955 |
| Dixit, Evelyn et al. (2010) Peroxisomes are signaling platforms for antiviral innate immunity.; Cell, 141: 668-81 |
|
GSE21215 |
| Djamai, Hanane et al. (2021) Biological Effects of BET Inhibition by OTX015 (MK-8628) and JQ1 in NPM1-Mutated (NPM1c) Acute Myeloid Leukemia (AML).; Biomedicines, 9: [no pages] |
|
GSE146362 |
| Djebali, Sarah et al. (2012) Landscape of transcription in human cells.; Nature, 489: 101-8 |
|
GSE33480 |
| Djoumerska-Alexieva, Iglika et al. (2015) Intravenous Immunoglobulin with Enhanced Polyspecificity Improves Survival in Experimental Sepsis and Aseptic Systemic Inflammatory Response Syndromes.; Mol Med, [no vol.]: [no pages] |
|
GSE55694 |
| Dlouhy, Ivan et al. (2022) Revised International Prognostic Index and genetic alterations are associated with early failure to R-CHOP in patients with diffuse large B-cell lymphoma.; Br J Haematol, 196: 589-598 |
|
GSE173263 |
| Dmitrzak-Weglarz, Monika et al. (2021) Molecular Regulation of the Melatonin Biosynthesis Pathway in Unipolar and Bipolar Depression.; Front Pharmacol, 12: 666541 |
|
GSE169459.1 GSE169459.2 |
| Do Rhee, Kun et al. (2022) Ciliary neurotrophic factor-mediated neuroprotection involves enhanced glycolysis and anabolism in degenerating mouse retinas.; Nat Commun, 13: 7037 |
|
GSE216208 |
| Do, J-S et al. (2016) An IL-27/Lag3 axis enhances Foxp3+ regulatory T cell-suppressive function and therapeutic efficacy.; Mucosal Immunol, 9: 137-45 |
|
GSE63455 |
| Do, Jeehaeh et al. (2020) A Leptin-Mediated Neural Mechanism Linking Breathing to Metabolism.; Cell Rep, 33: 108358 |
|
GSE158582 |
| Do, Jeong Tae et al. (2009) Generation of parthenogenetic induced pluripotent stem cells from parthenogenetic neural stem cells.; Stem Cells, 27: 2962-8 |
|
GSE15561 |
| Dobrin, Radu et al. (2009) Multi-tissue coexpression networks reveal unexpected subnetworks associated with disease.; Genome Biol, 10: R55 |
|
GSE13745 |
| Dobrowolny, Gabriella et al. (2015) Muscle Expression of SOD1(G93A) Modulates microRNA and mRNA Transcription Pattern Associated with the Myelination Process in the Spinal Cord of Transgenic Mice.; Front Cell Neurosci, 9: 463 |
|
GSE69582 |
| Dobrowolski, Mateusz et al. (2020) GDE3 regulates oligodendrocyte precursor proliferation via release of soluble CNTFR?.; Development, [no vol.]: [no pages] |
|
GSE135819 |
| Dodd, Daniel O et al. (2024) Ciliopathy patient variants reveal organelle-specific functions for TUBB4B in axonemal microtubules.; Science, 384: eadf5489 |
|
GSE246488 GSE214070 |
| Dodd, Lori E et al. (2006) Genes involved in DNA repair and nitrosamine metabolism and those located on chromosome 14q32 are dysregulated in nasopharyngeal carcinoma.; Cancer Epidemiol Biomarkers Prev, 15: 2216-25 |
|
GSE12452 |
| Dodiya, Hemraj B et al. (2022) Gut microbiota-driven brain Aβ amyloidosis in mice requires microglia.; J Exp Med, 219: [no pages] |
|
GSE185407.2 GSE185407.1 |
| Dodson, Kala M et al. (2026) ACSS2 mediates prenatal alcohol exposure-related morphological and behavioral phenotypes.; Neurobiol Dis, 221: 107341 |
|
GSE310211 |
| Doglioni, Ginevra et al. (2025) Aspartate signalling drives lung metastasis via alternative translation.; Nature, [no vol.]: [no pages] |
|
GSE236086 GSE277634 |
| Dohda, Takeaki et al. (2007) Notch signaling induces SKP2 expression and promotes reduction of p27Kip1 in T-cell acute lymphoblastic leukemia cell lines.; Exp Cell Res, 313: 3141-52 |
|
GSE6495 |
| Doherty, Colleen J et al. (2010) Circadian control of global gene expression patterns.; Annu Rev Genet, 44: 419-44 |
|
GSE70391 |
| Doherty, Robert et al. (2022) Identification of in vivo roles of ErbB4-JMa and its direct nuclear signaling using a novel isoform-specific knock out mouse.; Sci Rep, 12: 17267 |
|
GSE202063 |