List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Higashimoto, Mami et al. (2013) Adipose tissue derived stromal stem cell therapy in murine ConA-derived hepatitis is dependent on myeloid-lineage and CD4+ T-cell suppression.; Eur J Immunol, 43: 2956-68 |
|
GSE41465 |
| Higgins, Claire A et al. (2013) Microenvironmental reprogramming by three-dimensional culture enables dermal papilla cells to induce de novo human hair-follicle growth.; Proc Natl Acad Sci U S A, 110: 19679-88 |
|
GSE44765 |
| Highley, J Robin et al. (2014) Loss of nuclear TDP-43 in amyotrophic lateral sclerosis (ALS) causes altered expression of splicing machinery and widespread dysregulation of RNA splicing in motor neurones.; Neuropathol Appl Neurobiol, 40: 670-85 |
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GSE56500 GSE56503 GSE33855 |
| Hikichi, Takafusa et al. (2013) Transcription factors interfering with dedifferentiation induce cell type-specific transcriptional profiles.; Proc Natl Acad Sci U S A, 110: 6412-7 |
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GSE29875 |
| Hikida, Takatoshi et al. (2020) Nucleus accumbens pathways control cell-specific gene expression in the medial prefrontal cortex.; Sci Rep, 10: 1838 |
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GSE124583 |
| Hildebrandt, Ryan P et al. (2023) Muscleblind-like proteins use modular domains to localize RNAs by riding kinesins and docking to membranes.; Nat Commun, 14: 3427 |
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GSE207597 |
| Hildrestrand, Gunn A et al. (2021) NEIL1 and NEIL2 DNA glycosylases modulate anxiety and learning in a cooperative manner in mice.; Commun Biol, 4: 1354 |
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GSE198005 |
| Hilgert, Elien et al. (2025) Synergistic inhibition of CHK1 and MUS81 to combat replication stress resistance in high-risk neuroblastoma.; Sci Rep, 15: 45546 |
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GSE294750 |
| Hill, Alice et al. (2024) Corticosteroid Treatment During Sepsis Alters Hippocampal Function in Male and Female Survivors.; Biol Psychiatry Glob Open Sci, 4: 336-345 |
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GSE225868 |
| Hill, Christopher G et al. (2014) Transcriptional override: a regulatory network model of indirect responses to modulations in microRNA expression.; BMC Syst Biol, 8: 36 |
|
GSE52037 |
| Hill, Connor et al. (2025) NAB2-STAT6 drives an EGR1-dependent neuroendocrine program in solitary fibrous tumors.; Elife, 13: [no pages] |
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GSE249702 |
| Hill, Jonathan A et al. (2007) Foxp3 transcription-factor-dependent and -independent regulation of the regulatory T cell transcriptional signature.; Immunity, 27: 786-800 |
|
GSE7460 |
| Hill, Jonathan A et al. (2008) Retinoic acid enhances Foxp3 induction indirectly by relieving inhibition from CD4+CD44hi Cells.; Immunity, 29: 758-70 |
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GSE13306 |
| Hill, Lisa J et al. (2021) ILB®resolves inflammatory scarring and promotes functional tissue repair.; NPJ Regen Med, 6: 3 |
|
GSE153199 |
| Hill, Matthew et al. (2024) Detection of Residual iPSCs Following Differentiation of iPSC-Derived Retinal Pigment Epithelial Cells.; J Ocul Pharmacol Ther, 40: 680-687 |
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GSE276359 |
| Hill, Matthew J et al. (2012) Knockdown of the psychosis susceptibility gene ZNF804A alters expression of genes involved in cell adhesion.; Hum Mol Genet, 21: 1018-24 |
|
GSE28725 |
| Hill, Matthew J et al. (2014) Transcriptional consequences of schizophrenia candidate miR-137 manipulation in human neural progenitor cells.; Schizophr Res, 153: 225-30 |
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GSE49793 |
| Hill, Matthew J et al. (2017) Knockdown of the schizophrenia susceptibility geneTCF4alters gene expression and proliferation of progenitor cells from the developing human neocortex.; J Psychiatry Neurosci, 42: 181-188 |
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GSE62085 |
| Hill, Rebecca M et al. (2015) Combined MYC and P53 defects emerge at medulloblastoma relapse and define rapidly progressive, therapeutically targetable disease.; Cancer Cell, 27: 72-84 |
|
GSE62625 |
| Hillmeister, Philipp et al. (2008) Induction of cerebral arteriogenesis leads to early-phase expression of protease inhibitors in growing collaterals of the brain.; J Cereb Blood Flow Metab, 28: 1811-23 |
|
GSE6189 |
| Hilton, Isaac B et al. (2015) Epigenome editing by a CRISPR-Cas9-based acetyltransferase activates genes from promoters and enhancers.; Nat Biotechnol, 33: 510-7 |
|
GSE66742 |
| Himburg, Heather A et al. (2010) Pleiotrophin regulates the expansion and regeneration of hematopoietic stem cells.; Nat Med, 16: 475-82 |
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GSE20243 |
| Himes, Blanca E et al. (2014) RNA-Seq transcriptome profiling identifies CRISPLD2 as a glucocorticoid responsive gene that modulates cytokine function in airway smooth muscle cells.; PLoS One, 9: e99625 |
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GSE52778.2 |
| Hinard, Valérie et al. (2012) Key electrophysiological, molecular, and metabolic signatures of sleep and wakefulness revealed in primary cortical cultures.; J Neurosci, 32: 12506-17 |
|
GSE33491 |
| Hinchcliff, Monique et al. (2013) Molecular signatures in skin associated with clinical improvement during mycophenolate treatment in systemic sclerosis.; J Invest Dermatol, 133: 1979-89 |
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GSE45485 |
| Hindmarch, C et al. (2007) The transcriptome of the rat hypothalamic-neurohypophyseal system is highly strain-dependent.; J Neuroendocrinol, 19: 1009-12 |
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GSE8491 |
| Hindmarch, Charles C T et al. (2011) The transcriptome of the medullary area postrema: the thirsty rat, the hungry rat and the hypertensive rat.; Exp Physiol, 96: 495-504 |
|
GSE26660 |
| Hindmarch, Charles et al. (2006) A comprehensive description of the transcriptome of the hypothalamoneurohypophyseal system in euhydrated and dehydrated rats.; Proc Natl Acad Sci U S A, 103: 1609-14 |
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GSE3110 GSE3125 GSE3131 GSE3111 |
| Hindmarch, Charles et al. (2008) Microarray analysis of the transcriptome of the subfornical organ in the rat: regulation by fluid and food deprivation.; Am J Physiol Regul Integr Comp Physiol, 295: R1914-20 |
|
GSE12978 |
| Hinds, John W et al. (2022) S146L in MYC is a context-dependent activating substitution in cancer development.; PLoS One, 17: e0272771 |
|
GSE197323 |
| Hines, Elizabeth A et al. (2014) Comparison of temporal transcriptomic profiles from immature lungs of two rat strains reveals a viral response signature associated with chronic lung dysfunction.; PLoS One, 9: e112997 |
|
GSE51267 |
| Hing, Benjamin et al. (2024) Transcriptomic Evaluation of a Stress Vulnerability Network Using Single-Cell RNA Sequencing in Mouse Prefrontal Cortex.; Biol Psychiatry, 96: 886-899 |
|
GSE240975 |
| Hing, Benjamin et al. (2025) Parental preconceptual α-cypermethrin exposure alters embryonic brain transcriptomics in mice: Implications for autism spectrum disorder and stress vulnerability.; Neurotoxicology, 110: 181-196 |
|
GSE300410 |
| Hinojos, Cruz A et al. (2005) Combined genealogical, mapping, and expression approaches to identify spontaneously hypertensive rat hypertension candidate genes.; Hypertension, 45: 698-704 |
|
GSE2104 |
| Hinojosa, Antonio Jesús et al. (2018) The Microtubule Regulator NEK7 Coordinates the Wiring of Cortical Parvalbumin Interneurons.; Cell Rep, 24: 1231-1242 |
|
GSE115948 |
| Hinoue, Toshinori et al. (2012) Genome-scale analysis of aberrant DNA methylation in colorectal cancer.; Genome Res, [no vol.]: [no pages] |
|
GSE25070 |
| Hinrichs, Christian S et al. (2009) Adoptively transferred effector cells derived from naive rather than central memory CD8+ T cells mediate superior antitumor immunity.; Proc Natl Acad Sci U S A, 106: 17469-74 |
|
GSE16522 |
| Hinterdobler, Julia et al. (2021) Acute mental stress drives vascular inflammation and promotes plaque destabilization in mouse atherosclerosis.; Eur Heart J, 42: 4077-4088 |
|
GSE155396 |
| Hintzen, Dorine C et al. (2024) Reduction of chromosomal instability and inflammation is a common aspect of adaptation to aneuploidy.; EMBO Rep, 25: 5169-5193 |
|
GSE273576 |
| Hinze, Christian et al. (2021) Kidney Single-cell Transcriptomes Predict Spatial Corticomedullary Gene Expression and Tissue Osmolality Gradients.; J Am Soc Nephrol, 32: 291-306 |
|
GSE145687 |
| Hinze, Claas H et al. (2010) Immature cell populations and an erythropoiesis gene-expression signature in systemic juvenile idiopathic arthritis: implications for pathogenesis.; Arthritis Res Ther, 12: R123 |
|
GSE21521 |
| Hippo, Yoshitaka et al. (2002) Global gene expression analysis of gastric cancer by oligonucleotide microarrays.; Cancer Res, 62: 233-40 |
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GSE2685 |
| Hiraga, Kou et al. (2020) Redundant type II cadherins define neuroepithelial cell states for cytoarchitectonic robustness.; Commun Biol, 3: 574 |
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GSE157008 |
| Hirahara, Kiyoshi et al. (2012) Interleukin-27 priming of T cells controls IL-17 production in trans via induction of the ligand PD-L1.; Immunity, 36: 1017-30 |
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GSE38375 |
| Hirano, Kazumi et al. (2020) Indonesian Ginger (Bangle) Extract Promotes Neurogenesis of Human Neural Stem Cells through WNT Pathway Activation.; Int J Mol Sci, 21: [no pages] |
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GSE129415 |
| Hirano, Minato et al. (2023) The RNA helicase DDX39B activates FOXP3 RNA splicing to control T regulatory cell fate.; Elife, 12: [no pages] |
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GSE145773 |
| Hiraoka, Nobuyoshi et al. (2011) CXCL17 and ICAM2 are associated with a potential anti-tumor immune response in early intraepithelial stages of human pancreatic carcinogenesis.; Gastroenterology, 140: 310-21 |
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GSE19650 |
| Hirasaki, Masataka et al. (2018) Identification of the Coiled-Coil Domain as an Essential Methyl-CpG-Binding Domain Protein 3 Element for Preserving Lineage Commitment Potential of Embryonic Stem Cells.; Stem Cells, 36: 1355-1367 |
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GSE102499 |
| Hirasawa, Ryutaro et al. (2013) Somatic donor cell type correlates with embryonic, but not extra-embryonic, gene expression in postimplantation cloned embryos.; PLoS One, 8: e76422 |
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GSE49171 |
| Hirata, Koji et al. (2019) Exocrine tissue-driven TFF2 prevents apoptotic cell death of endocrine lineage during pancreas organogenesis.; Sci Rep, 9: 1636 |
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GSE118665 |
| Hirata, Takeshi et al. (2022) Humanized Anti-RGMa Antibody Treatment Promotes Repair of Blood-Spinal Cord Barrier Under Autoimmune Encephalomyelitis in Mice.; Front Immunol, 13: 870126 |
|
GSE196545 |
| Hirata, Yu et al. (2025) A skeletal muscle–sympathetic nerve–intestine network underlies muscle inflammation and atrophy induced by immobilization; bioRxiv, [no vol.]: [no pages] |
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GSE249324 |
| Hirayama, Takehiro et al. (2014) Meis1 is required for the maintenance of postnatal thymic epithelial cells.; PLoS One, 9: e89885 |
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GSE30824 GSE30825 |
| Hirayama, Teruyoshi et al. (2012) CTCF is required for neural development and stochastic expression of clustered Pcdh genes in neurons.; Cell Rep, 2: 345-57 |
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GSE38673 |
| Hirbec, Hélène et al. (2018) The microglial reaction signature revealed by RNAseq from individual mice.; Glia, 66: 971-986 |
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GSE109834 |
| Hiremath, Girish K et al. (2009) Gene expression changes in an animal model of in utero irradiation-induced Cortical Dysplasia.; Epileptic Disord, 11: 232-43 |
|
GSE13697 GSE13676 |
| Hirose, Michiko et al. (2017) CRISPR/Cas9-mediated genome editing in wild-derived mice: generation of tamed wild-derived strains by mutation of the a (nonagouti) gene.; Sci Rep, 7: 42476 |
|
GSE84840 |
| Hirose, Satoshi et al. (2023) IL-17A expression by both T cells and non-T cells contribute to HSV-IL-2-induced CNS demyelination.; Front Immunol, 14: 1102486 |
|
GSE219020 |
| Hirota, Akira et al. (2019) The nucleosome remodeling and deacetylase complex protein CHD4 regulates neural differentiation of mouse embryonic stem cells by down-regulating p53.; J Biol Chem, 294: 195-209 |
|
GSE114389 |
| Hirsch, Calley L et al. (2015) Myc and SAGA rewire an alternative splicing network during early somatic cell reprogramming.; Genes Dev, 29: 803-16 |
|
GSE67715 |
| Hirschler-Laszkiewicz, Iwona et al. (2022) The human ion channel TRPM2 modulates cell survival in neuroblastoma through E2F1 and FOXM1.; Sci Rep, 12: 6311 |
|
GSE197243 |
| Hirunagi, Tomoki et al. (2023) Exercise attenuates polyglutamine-mediated neuromuscular degeneration in a mouse model of spinal and bulbar muscular atrophy.; J Cachexia Sarcopenia Muscle, [no vol.]: [no pages] |
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GSE209885 |
| Hishida, Tomoaki et al. (2011) Indefinite self-renewal of ESCs through Myc/Max transcriptional complex-independent mechanisms.; Cell Stem Cell, 9: 37-49 |
|
GSE27881 |
| Hishida, Tomoaki et al. (2015) Functional compensation between Myc and PI3K signaling supports self-renewal of embryonic stem cells.; Stem Cells, 33: 713-25 |
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GSE60344 |
| Hitrec, Timna et al. (2023) Timed exercise stabilizes behavioral rhythms but not molecular programs in the brain's suprachiasmatic clock.; iScience, 26: 106002 |
|
GSE207992 |
| Hitzemann, Robert et al. (2017) Alignment of the transcriptome with individual variation in animals selectively bred for High Drinking-In-the-Dark (HDID).; Alcohol, 60: 115-120 |
|
GSE97032 |
| Hitzemann, Robert et al. (2019) Regional Analysis of the Brain Transcriptome in Mice Bred for High and Low Methamphetamine Consumption.; Brain Sci, 9: [no pages] |
|
GSE130254 |
| Hiyama, Keiko et al. (2008) Exploration of the genes responsible for unlimited proliferation of immortalized lung fibroblasts.; Exp Lung Res, 34: 373-90 |
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GSE9077.1 GSE9077.3 GSE9077.2 |
| Hjorton, Karin et al. (2020) The regulation and pharmacological modulation of immune complex induced type III IFN production by plasmacytoid dendritic cells.; Arthritis Res Ther, 22: 130 |
|
GSE149415 |
| Ho, Jenny N H G et al. (2022) Targeting MDM2 enhances antileukemia immunity after allogeneic transplantation via MHC-II and TRAIL-R1/2 upregulation.; Blood, 140: 1167-1181 |
|
GSE158103 |
| Ho, Ming-Fen et al. (2019) Ketamine and Active Ketamine Metabolites Regulate STAT3 and the Type I Interferon Pathway in Human Microglia: Molecular Mechanisms Linked to the Antidepressant Effects of Ketamine.; Front Pharmacol, 10: 1302 |
|
GSE134782 |
| Ho, Ming-Fen et al. (2022) Plasma TNFSF10 levels associated with acamprosate treatment response in patients with alcohol use disorder.; Front Pharmacol, 13: 986238 |
|
GSE208132 |
| Ho, Ming-Fen et al. (2023) Epigenetic regulation of GABA catabolism in iPSC-derived neurons: The molecular links between FGF21 and histone methylation.; Mol Metab, 77: 101798 |
|
GSE223173 |
| Ho, Ming-Fen et al. (2024) Molecular mechanisms involved in alcohol craving, IRF3, and endoplasmic reticulum stress: a multi-omics study.; Transl Psychiatry, 14: 165 |
|
GSE213380 |
| Ho, Ritchie et al. (2013) Stage-specific regulation of reprogramming to induced pluripotent stem cells by Wnt signaling and T cell factor proteins.; Cell Rep, 3: 2113-26 |
|
GSE46532 |
| Ho, Ritchie et al. (2016) ALS disrupts spinal motor neuron maturation and aging pathways within gene co-expression networks.; Nat Neurosci, 19: 1256-67 |
|
GSE75701 |
| Ho, Wan Yun et al. (2019) FUS-mediated dysregulation of Sema5a, an autism-related gene, in FUS mice with hippocampus-dependent cognitive deficits.; Hum Mol Genet, 28: 3777-3791 |
|
GSE135075 |
| Ho, Wan Yun et al. (2021) Dysfunction in nonsense-mediated decay, protein homeostasis, mitochondrial function, and brain connectivity in ALS-FUS mice with cognitive deficits.; Acta Neuropathol Commun, 9: 9 |
|
GSE157713 |
| Ho, Wan Yun et al. (2021) TDP-43 mediates SREBF2-regulated gene expression required for oligodendrocyte myelination.; J Cell Biol, 220: [no pages] |
|
GSE133047 |
| Hoang, Anh Cuong et al. (2021) Transcriptional Landscaping Identifies a Beige Adipocyte Depot in the Newborn Mouse.; Cells, 10: [no pages] |
|
GSE133500 |
| Hoang, Long Truong et al. (2010) The early whole-blood transcriptional signature of dengue virus and features associated with progression to dengue shock syndrome in Vietnamese children and young adults.; J Virol, 84: 12982-94 |
|
GSE25001 |
| Hoang, Phuong Mai et al. (2024) A PRMT5-ZNF326 axis mediates innate immune activation upon replication stress.; Sci Adv, 10: eadm9589 |
|
GSE236930 |
| Hoang, Phuong T et al. (2018) Subtype Diversification and Synaptic Specificity of Stem Cell-Derived Spinal Interneurons.; Neuron, 100: 135-149.e7 |
|
GSE112377 |
| Hoban, A E et al. (2016) Regulation of prefrontal cortex myelination by the microbiota.; Transl Psychiatry, 6: e774 |
|
GSE75816 |
| Hoch, Renée V et al. (2015) OTX2 Transcription Factor Controls Regional Patterning within the Medial Ganglionic Eminence and Regional Identity of the Septum.; Cell Rep, 12: 482-94 |
|
GSE69547 |
| Hochbaum, Daniel R et al. (2024) Thyroid hormone remodels cortex to coordinate body-wide metabolism and exploration.; Cell, 187: 5679-5697.e23 |
|
GSE271421 |
| Hochberg, Irit et al. (2015) Gene Expression Signature in Adipose Tissue of Acromegaly Patients.; PLoS One, 10: e0129359 |
|
GSE57803 |
| Hochstenbach, K et al. (2012) Transcriptomic fingerprints in human peripheral blood mononuclear cells indicative of genotoxic and non-genotoxic carcinogenic exposure.; Mutat Res, 746: 124-34 |
|
GSE24891 |
| Hochstenbach, Kevin et al. (2010) Transcriptomic profile indicative of immunotoxic exposure: in vitro studies in peripheral blood mononuclear cells.; Toxicol Sci, 118: 19-30 |
|
GSE19078 |
| Hochstenbach, Kevin et al. (2012) Global gene expression analysis in cord blood reveals gender-specific differences in response to carcinogenic exposure in utero.; Cancer Epidemiol Biomarkers Prev, 21: 1756-67 |
|
GSE31836 |
| Hodes, Georgia E et al. (2015) Sex Differences in Nucleus Accumbens Transcriptome Profiles Associated with Susceptibility versus Resilience to Subchronic Variable Stress.; J Neurosci, 35: 16362-76 |
|
GSE85136 |