List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Kalchschmidt, Jens et al. (2025) Biphasic control of the B cell transcriptome by mTORC1 and GSK3.; Cell Rep, 44: 116361 |
|
GSE290879.1 |
| Kaldunski, Mary et al. (2010) Identification of a serum-induced transcriptional signature associated with type 1 diabetes in the BioBreeding rat.; Diabetes, 59: 2375-85 |
|
GSE19537 |
| Kalinski, Ashley L et al. (2020) Analysis of the immune response to sciatic nerve injury identifies efferocytosis as a key mechanism of nerve debridement.; Elife, 9: [no pages] |
|
GSE153240 |
| Kaljunen, Heidi et al. (2023) Fanconi anemia pathway regulation by FANCI in prostate cancer.; Front Oncol, 13: 1260826 |
|
GSE211363 |
| Kalkat, Manpreet et al. (2018) MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis.; Mol Cell, 72: 836-848.e7 |
|
GSE117407 |
| Kalkavan, Halime et al. (2022) Sublethal cytochrome c release generates drug-tolerant persister cells.; Cell, 185: 3356-3374.e22 |
|
GSE189625 |
| Kaller, Markus et al. (2023) c-MYC-Induced AP4 Attenuates DREAM-Mediated Repression by p53.; Cancers (Basel), 15: [no pages] |
|
GSE221265 |
| Kalozoumi, Georgia et al. (2018) Glial responses during epileptogenesis in Mus musculus point to potential therapeutic targets.; PLoS One, 13: e0201742 |
|
GSE88992 |
| Kalra, Gurmannat et al. (2020) Biological insights from multi-omic analysis of 31 genomic risk loci for adult hearing difficulty.; PLoS Genet, 16: e1009025 |
|
GSE158325 |
| Kaluscha, Sebastian et al. (2022) Evidence that direct inhibition of transcription factor binding is the prevailing mode of gene and repeat repression by DNA methylation.; Nat Genet, 54: 1895-1906 |
|
GSE184469.1 GSE184469.2 |
| Kalvala, Anil Kumar et al. (2025) Extracellular vesicles modulate integrin signaling and subcellular energetics to promote pulmonary lymphangioleiomyomatosis metastasis.; Commun Biol, 8: 1623 |
|
GSE307366 |
| Kam, Sarah H Y et al. (2012) Peripheral blood gene expression changes during allergen inhalation challenge in atopic asthmatic individuals.; J Asthma, 49: 219-26 |
|
GSE24745 |
| Kam, Sung Chul et al. (2016) Gene expression profile comparison in the penile tissue of diabetes and cavernous nerve injury-induced erectile dysfunction rat model.; Investig Clin Urol, 57: 286-97 |
|
GSE31247 |
| Kamalakar, Archana et al. (2024) Delivery of a Jagged1-PEG-MAL hydrogel with pediatric human bone cells regenerates critically sized craniofacial bone defects.; Elife, 13: [no pages] |
|
GSE274096 |
| Kamao, Hiroyuki et al. (2014) Characterization of human induced pluripotent stem cell-derived retinal pigment epithelium cell sheets aiming for clinical application.; Stem Cell Reports, 2: 205-18 |
|
GSE50738 |
| Kamaraj, Uma S et al. (2020) EpiMogrify Models H3K4me3 Data to Identify Signaling Molecules that Improve Cell Fate Control and Maintenance.; Cell Syst, [no vol.]: [no pages] |
|
GSE155564 |
| Kambali, Maltesh et al. (2024) An increased copy number of glycine decarboxylase (GLDC) associated with psychosis reduces extracellular glycine and impairs NMDA receptor function.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE230871 |
| Kameda, Tomonori et al. (2021) Neuronal activation modulates enhancer activity of genes for excitatory synaptogenesis through de novo DNA methylation.; J Reprod Dev, 67: 369-379 |
|
GSE149342 |
| Kamei, Nobutaka et al. (2022) Identification of Brain Regions Activated by Sevoflurane and Propofol and Regional Changes in Gene Expression.; Acta Histochem Cytochem, 55: 37-46 |
|
GSE192399 |
| Kamens, Jennifer L et al. (2023) Proteasome inhibition targets the KMT2A transcriptional complex in acute lymphoblastic leukemia.; Nat Commun, 14: 809 |
|
GSE152816 |
| Kami, Daisuke et al. (2008) Gremlin enhances the determined path to cardiomyogenesis.; PLoS One, 3: e2407 |
|
GSE8481 |
| Kamikubo, Yasuhiko et al. (2010) Accelerated leukemogenesis by truncated CBF beta-SMMHC defective in high-affinity binding with RUNX1.; Cancer Cell, 17: 455-68 |
|
GSE21155 |
| Kaminen-Ahola, Nina et al. (2010) Postnatal growth restriction and gene expression changes in a mouse model of fetal alcohol syndrome.; Birth Defects Res A Clin Mol Teratol, 88: 818-26 |
|
GSE23105 GSE23106 |
| Kaminski, Henry J et al. (2016) Differential RNA Expression Profile of Skeletal Muscle Induced by Experimental Autoimmune Myasthenia Gravis in Rats.; Front Physiol, 7: 524 |
|
GSE11465 |
| Kamiya, Daisuke et al. (2011) Intrinsic transition of embryonic stem-cell differentiation into neural progenitors.; Nature, 470: 503-9 |
|
GSE25593 |
| Kamphuis, Willem et al. (2015) GFAP and vimentin deficiency alters gene expression in astrocytes and microglia in wild-type mice and changes the transcriptional response of reactive glia in mouse model for Alzheimer's disease.; Glia, 63: 1036-56 |
|
GSE74614 |
| Kan, Mengyuan et al. (2022) CEBPD modulates the airway smooth muscle transcriptomic response to glucocorticoids.; Respir Res, 23: 193 |
|
GSE146017 |
| Kana, Veronika et al. (2019) CSF-1 controls cerebellar microglia and is required for motor function and social interaction.; J Exp Med, 216: 2265-2281 |
|
GSE133362 GSE133360 |
| Kanaan, Nicholas M et al. (2015) The longitudinal transcriptomic response of the substantia nigra to intrastriatal 6-hydroxydopamine reveals significant upregulation of regeneration-associated genes.; PLoS One, 10: e0127768 |
|
GSE58710 |
| Kanagaki, Shuhei et al. (2021) Hydroxypropyl Cyclodextrin Improves Amiodarone-induced Aberrant Lipid Homeostasis of Alveolar Cells.; Am J Respir Cell Mol Biol, 64: 504-514 |
|
GSE146612 |
| Kanagaraj, Radhakrishnan et al. (2022) Integrated genome and transcriptome analyses reveal the mechanism of genome instability in ataxia with oculomotor apraxia 2.; Proc Natl Acad Sci U S A, 119: [no pages] |
|
GSE143680 |
| Kanageswaran, Ninthujah et al. (2015) Deep sequencing of the murine olfactory receptor neuron transcriptome.; PLoS One, 10: e0113170 |
|
GSE53793 |
| Kanamori, Fumiaki et al. (2021) Transcriptome-wide analysis of intracranial artery in patients with moyamoya disease showing upregulation of immune response, and downregulation of oxidative phosphorylation and DNA repair.; Neurosurg Focus, 51: E3 |
|
GSE157628 |
| Kanamori, Masayuki et al. (2015) Activation of the NRF2 pathway and its impact on the prognosis of anaplastic glioma patients.; Neuro Oncol, 17: 555-65 |
|
GSE52942 |
| Kanamori-Katayama, Mutsumi et al. (2011) LRRN4 and UPK3B are markers of primary mesothelial cells.; PLoS One, 6: e25391 |
|
GSE30793 |
| Kanan, Michael F et al. (2024) Neuronal deletion of the circadian clock gene Bmal1 induces cell-autonomous dopaminergic neurodegeneration.; JCI Insight, 9: [no pages] |
|
GSE241218 GSE241200 |
| Kanda, Sambee et al. (2022) Effects of Inhibitors of SLC9A-Type Sodium-Proton Exchangers onSurvival Motor Neuron 2(SMN2) mRNA Splicing and Expression.; Mol Pharmacol, 102: 92-105 |
|
GSE179861 |
| Kanda, Shoichiro et al. (2014) Sall1 maintains nephron progenitors and nascent nephrons by acting as both an activator and a repressor.; J Am Soc Nephrol, 25: 2584-95 |
|
GSE45841 GSE45844 |
| Kandel, Benjamin A et al. (2016) Genomewide comparison of the inducible transcriptomes of nuclear receptors CAR, PXR and PPARα in primary human hepatocytes.; Biochim Biophys Acta, 1859: 1218-1227 |
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GSE76148 |
| Kandoi, Sangeetha et al. (2024) Disease modeling and pharmacological rescue of autosomal dominant retinitis pigmentosa associated withRHOcopy number variation.; Elife, 12: [no pages] |
|
GSE245545 |
| Kane, Christopher D et al. (2009) Molecular characterization of novel and selective peroxisome proliferator-activated receptor alpha agonists with robust hypolipidemic activity in vivo.; Mol Pharmacol, 75: 296-306 |
|
GSE12147 |
| Kaneshiro, Jeanae M et al. (2023) Lamin B1 overexpression alters chromatin organization and gene expression.; Nucleus, 14: 2202548 |
|
GSE212107 |
| Kang, Han et al. (2023) Development of a next-generation endogenous OCT4 inducer and its anti-aging effect in vivo.; Eur J Med Chem, 257: 115513 |
|
GSE200136 |
| Kang, Hong Soon et al. (2011) Transcriptional profiling reveals a role for RORalpha in regulating gene expression in obesity-associated inflammation and hepatic steatosis.; Physiol Genomics, 43: 818-28 |
|
GSE23736 |
| Kang, Hong Soon et al. (2013) CD44 plays a critical role in regulating diet-induced adipose inflammation, hepatic steatosis, and insulin resistance.; PLoS One, 8: e58417 |
|
GSE43104 |
| Kang, Huining et al. (2010) Gene expression classifiers for relapse-free survival and minimal residual disease improve risk classification and outcome prediction in pediatric B-precursor acute lymphoblastic leukemia.; Blood, 115: 1394-405 |
|
GSE11877 |
| Kang, Hyo Jung et al. (2011) Spatio-temporal transcriptome of the human brain.; Nature, 478: 483-9 |
|
GSE25219.1 |
| Kang, Hyun Mi (2023) Kidney Organoid Derived from Human Pluripotent and Adult Stem Cells for Disease Modeling.; Dev Reprod, 27: 57-65 |
|
GSE228971 |
| Kang, Hyunji et al. (2024) GolpHCat (TMEM87A), a unique voltage-dependent cation channel in Golgi apparatus, contributes to Golgi-pH maintenance and hippocampus-dependent memory.; Nat Commun, 15: 5830 |
|
GSE228084 |
| Kang, Jongseok et al. (2025) Cerebrospinal fluid attenuates the efficacy of methotrexate against acute lymphoblastic leukemia cells.; Blood Neoplasia, 2: 100057 |
|
GSE274857 |
| Kang, Mengjie et al. (2026) Tirzepatide mitigates atherosclerosis progression and modulates oxLDL-mediated proatherogenic effects in macrophages: evidence for M1/M2 homeostasis restoration.; Arch Pharm Res, 49: 554-574 |
|
GSE287433 |
| Kang, Minkyung et al. (2025) Aberrant ERK signaling in astrocytes impairs learning and memory in RASopathy-associated BRAF mutant mouse models.; J Clin Invest, 135: [no pages] |
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GSE234763 GSE234548 GSE283653 |
| Kang, Miseon et al. (2026) Lateral habenula 5-HT4receptor signaling restores social novelty preference after acute isolation.; Cell Rep, 45: 117458 |
|
GSE200082 |
| Kang, Phil Jun et al. (2019) mRNA-Driven Generation of Transgene-Free Neural Stem Cells from Human Urine-Derived Cells.; Cells, 8: [no pages] |
|
GSE119669 |
| Kang, Ryeonghwa et al. (2024) Loss of Katnal2 leads to ependymal ciliary hyperfunction and autism-related phenotypes in mice.; PLoS Biol, 22: e3002596 |
|
GSE219228 |
| Kang, S S et al. (2018) Lipocalin-2 protects the brain during inflammatory conditions.; Mol Psychiatry, 23: 344-350 |
|
GSE88959 |
| Kang, Seokjo et al. (2024) Microglia undergo sex-dimorphic transcriptional and metabolic rewiring during aging.; J Neuroinflammation, 21: 150 |
|
GSE267529 |
| Kang, Seoyoung et al. (2025) Dicer is essential for proper maturation, composition, and function in the postnatal retina.; iScience, 28: 113794 |
|
GSE288381.2 |
| Kang, Seul Gi et al. (2021) Differential roles of GDF15 and FGF21 in systemic metabolic adaptation to the mitochondrial integrated stress response.; iScience, 24: 102181 |
|
GSE149553 |
| Kang, Seung Woo et al. (2025) Insulin-like growth factor 2 as a driving force for exponential expansion and differentiation of the neonatal thymus.; Development, 152: [no pages] |
|
GSE267706 |
| Kang, Silvia S et al. (2018) Microglial translational profiling reveals a convergent APOE pathway from aging, amyloid, and tau.; J Exp Med, 215: 2235-2245 |
|
GSE117646 |
| Kang, Sona et al. (2015) Identification of nuclear hormone receptor pathways causing insulin resistance by transcriptional and epigenomic analysis.; Nat Cell Biol, 17: 44-56 |
|
GSE62635 |
| Kang, Tae Hyuk et al. (2013) The housekeeping gene hypoxanthine guanine phosphoribosyltransferase (HPRT) regulates multiple developmental and metabolic pathways of murine embryonic stem cell neuronal differentiation.; PLoS One, 8: e74967 |
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GSE42453 GSE42662 |
| Kang, Wenyan et al. (2020) Transcriptome analysis reveals the mechanism of stromal cell-derived factor-1 and exendin-4 synergistically promoted periodontal ligament stem cells osteogenic differentiation.; PeerJ, 9: e12091 |
|
GSE163354 |
| Kang, Yujung et al. (2013) Apelin-APJ signaling is a critical regulator of endothelial MEF2 activation in cardiovascular development.; Circ Res, 113: 22-31 |
|
GSE46825 |
| Kangas, Salla M et al. (2016) An approach to comprehensive genome and proteome expression analyses in Schwann cells and neurons during peripheral nerve myelin formation.; J Neurochem, 138: 830-44 |
|
GSE60345 |
| Kangaspeska, Sara et al. (2008) Transient cyclical methylation of promoter DNA.; Nature, 452: 112-5 |
|
GSE10145 |
| Kanki, Yasuharu et al. (2011) Epigenetically coordinated GATA2 binding is necessary for endothelium-specific endomucin expression.; EMBO J, 30: 2582-95 |
|
GSE28304 |
| Kanlayaprasit, Songphon et al. (2021) Autism-Related Transcription Factors Underlying the Sex-Specific Effects of Prenatal Bisphenol A Exposure on Transcriptome-Interactome Profiles in the Offspring Prefrontal Cortex.; Int J Mol Sci, 22: [no pages] |
|
GSE229073 |
| Kannan, Kalpana et al. (2011) Recurrent chimeric RNAs enriched in human prostate cancer identified by deep sequencing.; Proc Natl Acad Sci U S A, 108: 9172-7 |
|
GSE22260 |
| Kannan, Ramakrishnan et al. (2025) Axon Regeneration and Functional Recovery after Spinal Cord Injury is Enhanced by Allele-Specific ApoE Neuronal Action through LRP8.; bioRxiv, [no vol.]: [no pages] |
|
GSE283595 |
| Kannan, Sankaranarayanan et al. (2011) Notch/HES1-mediated PARP1 activation: a cell type-specific mechanism for tumor suppression.; Blood, 117: 2891-900 |
|
GSE26366 |
| Kano, Makoto et al. (2005) A meta-clustering analysis indicates distinct pattern alteration between two series of gene expression profiles for induced ischemic tolerance in rats.; Physiol Genomics, 21: 274-83 |
|
GSE1357 |
| Kanojia, Sukrati et al. (2023) Dynamic regulation of pancreatic β cell function and gene expression by the SND1 coregulatorin vitro.; Islets, 15: 2267725 |
|
GSE240993 |
| Kanouchi, Hiroaki et al. (2016) The Brewed Rice Vinegar Kurozu Increases HSPA1A Expression and Ameliorates Cognitive Dysfunction in Aged P8 Mice.; PLoS One, 11: e0150796 |
|
GSE70514 |
| Kansara, Maya et al. (2013) Immune response to RB1-regulated senescence limits radiation-induced osteosarcoma formation.; J Clin Invest, 123: 5351-60 |
|
GSE50532 |
| Kantarci, Husniye et al. (2024) Schwann cell-secreted PGE2promotes sensory neuron excitability during development.; Cell, 187: 4690-4712.e30 |
|
GSE268606 |
| Kantzer, Christina Geraldine et al. (2021) ACSA-2 and GLAST classify subpopulations of multipotent and glial-restricted cerebellar precursors.; J Neurosci Res, 99: 2228-2249 |
|
GSE117886 |
| Kantzer, Christina Geraldine et al. (2022) ID1 and CEBPA coordinate epidermal progenitor cell differentiation.; Development, 149: [no pages] |
|
GSE215055 |
| Kao, Chia-Hung et al. (2012) Assessment of chitosan-affected metabolic response by peroxisome proliferator-activated receptor bioluminescent imaging-guided transcriptomic analysis.; PLoS One, 7: e34969 |
|
GSE33565 |
| Kao, Kuo-Jang et al. (2011) Correlation of microarray-based breast cancer molecular subtypes and clinical outcomes: implications for treatment optimization.; BMC Cancer, 11: 143 |
|
GSE20685 |
| Kapeli, Katannya et al. (2016) Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses.; Nat Commun, 7: 12143 |
|
GSE77704 GSE77702 |
| Kaplan, Artem et al. (2014) Neuronal matrix metalloproteinase-9 is a determinant of selective neurodegeneration.; Neuron, 81: 333-48 |
|
GSE52118 |
| Kaplan, Eitan et al. (2018) ASCT1 (Slc1a4) transporter is a physiologic regulator of brain d-serine and neurodevelopment.; Proc Natl Acad Sci U S A, 115: 9628-9633 |
|
GSE108675 |
| Kaplelach, Azariah K et al. (2025) Delivering Progranulin to Astrocytic Lysosomes Promotes Growth of Co-Cultured Neurons.; J Neurochem, 169: e70284 |
|
GSE302849 |
| Kapoor, Ashish et al. (2017) Testing the Ret and Sema3d genetic interaction in mouse enteric nervous system development.; Hum Mol Genet, 26: 1811-1820 |
|
GSE89627 |
| Kapoor, Manav et al. (2021) Multi-omics integration analysis identifies novel genes for alcoholism with potential overlap with neurodegenerative diseases.; Nat Commun, 12: 5071 |
|
GSE189139 |
| Kapur, Mridu et al. (2020) Expression of the Neuronal tRNA n-Tr20 Regulates Synaptic Transmission and Seizure Susceptibility.; Neuron, [no vol.]: [no pages] |
|
GSE151742.2 GSE151742.1 |
| Karaczyn, Aldona A et al. (2017) Human NUMB6 Induces Epithelial-Mesenchymal Transition and Enhances Breast Cancer Cells Migration and Invasion.; J Cell Biochem, 118: 237-251 |
|
GSE29137 |
| Karadima, Eleftheria et al. (2025) ACOD1 regulates microglial arginine metabolism and inflammatory responses.; Front Immunol, 17: 1731962 |
|
GSE299665 |