List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Khambata-Ford, Shirin et al. (2007) Expression of epiregulin and amphiregulin and K-ras mutation status predict disease control in metastatic colorectal cancer patients treated with cetuximab.; J Clin Oncol, 25: 3230-7 |
|
GSE5851 |
| Khan, A Basit et al. (2023) CXCR4 expression is associated with proneural-to-mesenchymal transition in glioblastoma.; Int J Cancer, 152: 713-724 |
|
GSE184941 |
| Khan, Adnan et al. (2019) A Systems Vaccinology Approach Reveals the Mechanisms of Immunogenic Responses to Hantavax Vaccination in Humans.; Sci Rep, 9: 4760 |
|
GSE120115 |
| Khan, Ishaq et al. (2017) Pleomorphism and drug resistant cancer stem cells are characteristic of aggressive primary meningioma cell lines.; Cancer Cell Int, 17: 72 |
|
GSE77259 |
| Khan, J et al. (2001) Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks.; Nat Med, 7: 673-9 |
|
khan-bluecell |
| Khan, Meraj A et al. (2012) Genome-wide expressions in autologous eutopic and ectopic endometrium of fertile women with endometriosis.; Reprod Biol Endocrinol, 10: 84 |
|
GSE37837 |
| Khan, Naazneen et al. (2022) Human APOE ɛ3 and APOE ɛ4 Alleles Have Differential Effects on Mouse Olfactory Epithelium.; J Alzheimers Dis, 85: 1481-1494 |
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GSE181038 |
| Khan, Safdar N et al. (2008) Identification of novel gene expression in healing fracture callus tissue by DNA microarray.; HSS J, 4: 149-60 |
|
GSE17825 |
| Khan, Shahid Y et al. (2015) Transcriptome Profiling of Developing Murine Lens Through RNA Sequencing.; Invest Ophthalmol Vis Sci, 56: 4919-26 |
|
GSE69221.2 |
| Khan, Shahid Y et al. (2016) FOXE3 contributes to Peters anomaly through transcriptional regulation of an autophagy-associated protein termed DNAJB1.; Nat Commun, 7: 10953 |
|
GSE76389 |
| Khan, Shaza et al. (2024) Vasopressin V2 receptor, tolvaptan, and ERK1/2 phosphorylation in the renal collecting duct.; Am J Physiol Renal Physiol, 326: F57-F68 |
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GSE235936 GSE243773 |
| Khan, Shaza et al. (2025) InducibleAvpknockout mouse line.; Am J Physiol Renal Physiol, 329: F784-F795 |
|
GSE304530 |
| Khan, Usman A et al. (2014) Molecular drivers and cortical spread of lateral entorhinal cortex dysfunction in preclinical Alzheimer's disease.; Nat Neurosci, 17: 304-11 |
|
GSE49311 |
| Khandanpour, Cyrus et al. (2010) Evidence that growth factor independence 1b regulates dormancy and peripheral blood mobilization of hematopoietic stem cells.; Blood, 116: 5149-61 |
|
GSE20655 |
| Khandanpour, Cyrus et al. (2012) The human GFI136N variant induces epigenetic changes at the Hoxa9 locus and accelerates K-RAS driven myeloproliferative disorder in mice.; Blood, 120: 4006-17 |
|
GSE25551 |
| Khandanpour, Cyrus et al. (2013) Growth factor independence 1 antagonizes a p53-induced DNA damage response pathway in lymphoblastic leukemia.; Cancer Cell, 23: 200-14 |
|
GSE32910 |
| Khandelwal, Abinash et al. (2023) Mbnl2 loss alters novel context processing and impairs object recognition memory.; iScience, 26: 106732 |
|
GSE226191 |
| Khandelwal, Nitin et al. (2019) miR-30 Family miRNAs Mediate the Effect of Chronic Social Defeat Stress on Hippocampal Neurogenesis in Mouse Depression Model.; Front Mol Neurosci, 12: 188 |
|
GSE132819 GSE132820 |
| Khandros, Eugene et al. (2020) Understanding heterogeneity of fetal hemoglobin induction through comparative analysis of F and A erythroblasts.; Blood, 135: 1957-1968 |
|
GSE144052 |
| Khanna, Sangeeta et al. (2003) Comprehensive expression profiling by muscle tissue class and identification of the molecular niche of extraocular muscle.; FASEB J, 17: 1370-2 |
|
GSE142 |
| Kharabi Masouleh, Behzad et al. (2014) Mechanistic rationale for targeting the unfolded protein response in pre-B acute lymphoblastic leukemia.; Proc Natl Acad Sci U S A, 111: E2219-28 |
|
GSE30883 |
| Kharma, Budiman et al. (2014) STAT1 drives tumor progression in serous papillary endometrial cancer.; Cancer Res, 74: 6519-30 |
|
GSE56026 |
| Khatir, Inès et al. (2023) Decoupling of mRNA and Protein Expression in Aging Brains Reveals the Age-Dependent Adaptation of Specific Gene Subsets.; Cells, 12: [no pages] |
|
GSE218637 |
| Khatri, Purvesh et al. (2013) A common rejection module (CRM) for acute rejection across multiple organs identifies novel therapeutics for organ transplantation.; J Exp Med, 210: 2205-21 |
|
GSE50058 |
| Khatua, Soumen et al. (2003) Overexpression of the EGFR/FKBP12/HIF-2alpha pathway identified in childhood astrocytomas by angiogenesis gene profiling.; Cancer Res, 63: 1865-70 |
|
khatua-astrocytoma GSE3185 |
| Khatun, Mst Reshma et al. (2020) RETRACTED ARTICLE: Selected TLR7/8 agonist and type I interferon (IFN-α) cooperatively redefine the microglia transcriptome.; Inflammopharmacology, [no vol.]: 547 |
|
GSE104056 |
| Khazaei, Sima et al. (2023) Single substitution in H3.3G34 alters DNMT3A recruitment to cause progressive neurodegeneration.; Cell, 186: 1162-1178.e20 |
|
GSE199882 |
| Khazeem, Mushtaq M et al. (2022) TOP2B Is Required to Maintain the Adrenergic Neural Phenotype and for ATRA-Induced Differentiation of SH-SY5Y Neuroblastoma Cells.; Mol Neurobiol, 59: 5987-6008 |
|
GSE142383 |
| Khedr, Sherif et al. (2024) Role of cGAS/STING pathway in aging and sexual dimorphism in diabetic kidney disease.; JCI Insight, 10: [no pages] |
|
GSE243138 |
| Khetchoumian, Konstantin et al. (2007) Loss of Trim24 (Tif1alpha) gene function confers oncogenic activity to retinoic acid receptor alpha.; Nat Genet, 39: 1500-6 |
|
GSE9012 |
| Khetchoumian, Konstantin et al. (2019) Pituitary cell translation and secretory capacities are enhanced cell autonomously by the transcription factor Creb3l2.; Nat Commun, 10: 3960 |
|
GSE132321 |
| Khlghatyan, Jivan et al. (2020) CRISPR-Cas9-Mediated Intersectional Knockout of Glycogen Synthase Kinase 3β in D2 Receptor-Expressing Medial Prefrontal Cortex Neurons Reveals Contributions to Emotional Regulation.; CRISPR J, 3: 198-210 |
|
GSE139564 |
| Khlghatyan, Jivan et al. (2020) Fxr1 regulates sleep and synaptic homeostasis.; EMBO J, 39: e103864 |
|
GSE139576 |
| Kho, Alvin T et al. (2004) Conserved mechanisms across development and tumorigenesis revealed by a mouse development perspective of human cancers.; Genes Dev, 18: 629-40 |
|
GSE14514 |
| Kho, Alvin T et al. (2010) Transcriptomic analysis of human lung development.; Am J Respir Crit Care Med, 181: 54-63 |
|
GSE14334 |
| Kho, Alvin T et al. (2013) Identification of dedifferentiation and redevelopment phases during postpneumonectomy lung growth.; Am J Physiol Lung Cell Mol Physiol, 305: L542-54 |
|
GSE39817 |
| Kho, Alvin T et al. (2016) Age, Sexual Dimorphism, and Disease Associations in the Developing Human Fetal Lung Transcriptome.; Am J Respir Cell Mol Biol, 54: 814-21 |
|
GSE68896 |
| Kholmanskikh, Olga et al. (2010) Interleukins 1alpha and 1beta secreted by some melanoma cell lines strongly reduce expression of MITF-M and melanocyte differentiation antigens.; Int J Cancer, 127: 1625-36 |
|
GSE19428 |
| Khongkla, Ekkaphot et al. (2021) A Novel Methodology Using Dexamethasone to Induce Neuronal Differentiation in the CNS-Derived Catecholaminergic CAD Cells.; Cell Mol Neurobiol, [no vol.]: [no pages] |
|
GSE162087 |
| Khoo, Sok Kean et al. (2011) Acquiring genome-wide gene expression profiles in Guthrie card blood spots using microarrays.; Pathol Int, 61: 1-6 |
|
GSE19919 |
| Khourieh, Joëlle et al. (2019) A deep intronic splice mutation ofSTAT3underlies hyper IgE syndrome by negative dominance.; Proc Natl Acad Sci U S A, 116: 16463-16472 |
|
GSE149602 |
| Khoury, Nathalie et al. (2019) Resveratrol Preconditioning Induces Genomic and Metabolic Adaptations within the Long-Term Window of Cerebral Ischemic Tolerance Leading to Bioenergetic Efficiency.; Mol Neurobiol, 56: 4549-4565 |
|
GSE113298 |
| Khoury-Hanold, William et al. (2016) Viral Spread to Enteric Neurons Links Genital HSV-1 Infection to Toxic Megacolon and Lethality.; Cell Host Microbe, 19: 788-99 |
|
GSE74215 |
| Khudayberdiev, Sharof et al. (2024) The actin-binding protein CAP1 represses MRTF-SRF-dependent gene expression in mouse cerebral cortex.; Sci Signal, 17: eadj0032 |
|
GSE262154 |
| Kiaii, Shahryar et al. (2013) Follicular lymphoma cells induce changes in T-cell gene expression and function: potential impact on survival and risk of transformation.; J Clin Oncol, 31: 2654-61 |
|
GSE27928 |
| Kiang, Anne et al. (2006) Multiple innate inflammatory responses induced after systemic adenovirus vector delivery depend on a functional complement system.; Mol Ther, 14: 588-98 |
|
GSE4128 |
| Kidd, Mark et al. (2007) GeneChip, geNorm, and gastrointestinal tumors: novel reference genes for real-time PCR.; Physiol Genomics, 30: 363-70 |
|
GSE6272 |
| Kido, Tatsuo et al. (2017) Aberrant activation of the human sex-determining gene in early embryonic development results in postnatal growth retardation and lethality in mice.; Sci Rep, 7: 4113 |
|
GSE97847 GSE97843 |
| Kiechle, Martin et al. (2019) In Vivo Protein Complementation Demonstrates Presynaptic α-Synuclein Oligomerization and Age-Dependent Accumulation of 8-16-mer Oligomer Species.; Cell Rep, 29: 2862-2874.e9 |
|
GSE134462 |
| Kiefer, Lea et al. (2018) Expanding the Nucleoside Recoding Toolkit: Revealing RNA Population Dynamics with 6-Thioguanosine.; J Am Chem Soc, 140: 14567-14570 |
|
GSE118318 |
| Kiefer, Lea et al. (2024) Tuning cohesin trajectories enables differential readout of the Pcdhα cluster across neurons.; Science, 385: eadm9802 |
|
GSE249430 |
| Kielar, Michel et al. (2014) Mutations in Eml1 lead to ectopic progenitors and neuronal heterotopia in mouse and human.; Nat Neurosci, 17: 923-33 |
|
GSE56907 |
| Kiernan, Elizabeth A et al. (2019) Neonatal Intermittent Hypoxia Induces Lasting Sex-Specific Augmentation of Rat Microglial Cytokine Expression.; Front Immunol, 10: 1479 |
|
GSE126946 |
| Kiernan, Elizabeth A et al. (2020) Prior Hypoxia Exposure Enhances Murine Microglial Inflammatory Gene Expressionin vitroWithout Concomitant H3K4me3 Enrichment.; Front Cell Neurosci, 14: 535549 |
|
GSE108770 |
| Kigar, Stacey L et al. (2024) Chronic social defeat stress induces meningeal neutrophilia via type I interferon signaling.; bioRxiv, [no vol.]: [no pages] |
|
GSE275966 |
| Kiialainen, Anna et al. (2007) Transcript profiles of dendritic cells of PLOSL patients link demyelinating CNS disorders with abnormalities in pathways of actin bundling and immune response.; J Mol Med (Berl), 85: 971-83 |
|
GSE3624 |
| Kikegawa, Mami et al. (2020) Early Transcriptomic Changes upon Thalidomide Exposure Influence the Later Neuronal Development in Human Embryonic Stem Cell-Derived Spheres.; Int J Mol Sci, 21: [no pages] |
|
GSE151239 |
| Kikkawa, Takako et al. (2013) Dmrta1 regulates proneural gene expression downstream of Pax6 in the mammalian telencephalon.; Genes Cells, 18: 636-49 |
|
GSE43413 |
| Kikuchi, Akifumi et al. (2013) Identification of NUCKS1 as a colorectal cancer prognostic marker through integrated expression and copy number analysis.; Int J Cancer, [no vol.]: [no pages] |
|
GSE27854 |
| Kikuchi, Hiroaki et al. (2021) Bayesian identification of candidate transcription factors for the regulation ofAqp2gene expression.; Am J Physiol Renal Physiol, 321: F389-F401 |
|
GSE163566 |
| Kikuchi, Ken et al. (2014) Cell-cycle dependent expression of a translocation-mediated fusion oncogene mediates checkpoint adaptation in rhabdomyosarcoma.; PLoS Genet, 10: e1004107 |
|
GSE41675 |
| Kikuchi, Tetsuhiro et al. (2017) Human iPS cell-derived dopaminergic neurons function in a primate Parkinson's disease model.; Nature, 548: 592-596 |
|
GSE99253 |
| Kikutani, Kazuya et al. (2023) GENETIC DELETION OF TRANSLOCATOR PROTEIN EXACERBATES POST-SEPSIS SYNDROME WITH ACTIVATION OF THE C1Q PATHWAY IN SEPTIC MOUSE MODEL.; Shock, 59: 82-90 |
|
GSE220153 |
| Kiltschewskij, Dylan J et al. (2020) Characterising the Transcriptional and Translational Impact of the Schizophrenia-Associated miR-1271-5p in Neuronal Cells.; Cells, 9: [no pages] |
|
GSE148827 |
| Kiltschewskij, Dylan J et al. (2020) Transcriptome-Wide Analysis of Interplay between mRNA Stability, Translation and Small RNAs in Response to Neuronal Membrane Depolarization.; Int J Mol Sci, 21: [no pages] |
|
GSE155727 |
| Kilzheimer, Alexander et al. (2023) Failure of diet-induced transcriptional adaptations in alpha-synuclein transgenic mice.; Hum Mol Genet, 32: 450-461 |
|
GSE197511 |
| Kim, Bong Cho et al. (2010) Time-dependently expressed markers and the characterization for premature senescence induced by ionizing radiation in MCF7.; Oncol Rep, 24: 395-403 |
|
GSE21748 |
| Kim, BongWoo et al. (2021) Neuronal activity-induced BRG1 phosphorylation regulates enhancer activation.; Cell Rep, 36: 109357 |
|
GSE174583 |
| Kim, Bu-Yeo et al. (2018) Evaluation of Animal Models by Comparison with Human Late-Onset Alzheimer's Disease.; Mol Neurobiol, 55: 9234-9250 |
|
GSE104031.1 GSE104031.2 |
| Kim, Bu-Yeo et al. (2020) Similarity of therapeutic networks induced by a multi-component herbal remedy, Ukgansan, in neurovascular unit cells.; Sci Rep, 10: 2658 |
|
GSE134414.2 GSE134414.1 |
| Kim, Bu-Yeo et al. (2021) Differential Transcriptional Regulation of Polymorphic p53 Codon 72 in Metabolic Pathways.; Int J Mol Sci, 22: [no pages] |
|
GSE183668 |
| Kim, Changyoun et al. (2013) Neuron-released oligomeric ?-synuclein is an endogenous agonist of TLR2 for paracrine activation of microglia.; Nat Commun, 4: 1562 |
|
GSE26532 |
| Kim, Christina K et al. (2017) Molecular and Circuit-Dynamical Identification of Top-Down Neural Mechanisms for Restraint of Reward Seeking.; Cell, 170: 1013-1027.e14 |
|
GSE101185 |
| Kim, Chungyeul et al. (2011) Estrogen receptor (ESR1) mRNA expression and benefit from tamoxifen in the treatment and prevention of estrogen receptor-positive breast cancer.; J Clin Oncol, 29: 4160-7 |
|
GSE12665 |
| Kim, Dae-Seok et al. (2019) Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21.; Mol Cell, 75: 1270-1285.e14 |
|
GSE115761 |
| Kim, Dahihm et al. (2023) Ccr2+ Monocyte-Derived Macrophages Influence Trajectories of Acquired Therapy Resistance in Braf-Mutant Melanoma.; Cancer Res, 83: 2328-2344 |
|
GSE226835 |
| Kim, Dong Kyu et al. (2024) Brain hypothyroidism silences the immune response of microglia in Alzheimer's disease animal model.; Sci Adv, 10: eadi1863 |
|
GSE219129 |
| Kim, Dong Won et al. (2020) The cellular and molecular landscape of hypothalamic patterning and differentiation from embryonic to late postnatal development.; Nat Commun, 11: 4360 |
|
GSE132355.1 GSE132355.2 GSE132355.3 |
| Kim, Dongkyun et al. (2024) Inhibitory co-receptor Lag3 supports Foxp3+regulatory T cell function by restraining Myc-dependent metabolic programming.; Immunity, 57: 2634-2650.e5 |
|
GSE226083 |
| Kim, Dongyun et al. (2024) Senescent Astrocytes Derived from Human Pluripotent Stem Cells Reveal Age-Related Changes and Implications for Neurodegeneration.; Aging Dis, 16: 1709-1731 |
|
GSE246073 |
| Kim, Doyeong et al. (2025) Transcriptome signatures of human neural stem cells derived from LRRK2 gene therapeutic cells.; Sci Rep, 15: 12286 |
|
GSE183499 |
| Kim, Esther S et al. (2026) Polyunsaturated Fatty Acid Balance Modulates Microglial State in a Murine Model of Oxygen-Induced Neovascularization.; Nutrients, 18: [no pages] |
|
GSE123945 |
| Kim, Eun Ji et al. (2013) Biological features of core networks that result from a high-fat diet in hepatic and pulmonary tissues in mammary tumour-bearing, obesity-resistant mice.; Br J Nutr, 110: 241-55 |
|
GSE36211 |
| Kim, Eun Ji et al. (2018) Complete Transcriptome Profiling of Normal and Age-Related Macular Degeneration Eye Tissues Reveals Dysregulation of Anti-Sense Transcription.; Sci Rep, 8: 3040 |
|
GSE99248 |
| Kim, Eunha et al. (2022) Maternal gut bacteria drive intestinal inflammation in offspring with neurodevelopmental disorders by altering the chromatin landscape of CD4+T cells.; Immunity, 55: 145-158.e7 |
|
GSE165693 |
| Kim, Gab Seok et al. (2025) Single-cell analysis identifies Ifi27l2a as a gene regulator of microglial inflammation in the context of aging and stroke in mice.; Nat Commun, 16: 1639 |
|
GSE261494 |
| Kim, Garam et al. (2022) Genome-wide CRISPR screen reveals v-ATPase as a drug target to lower levels of ALS protein ataxin-2.; Cell Rep, 41: 111508 |
|
GSE189417 |
| Kim, Hail et al. (2010) Serotonin regulates pancreatic beta cell mass during pregnancy.; Nat Med, 16: 804-8 |
|
GSE21860 |
| Kim, Han-Seop et al. (2017) Schwann Cell Precursors from Human Pluripotent Stem Cells as a Potential Therapeutic Target for Myelin Repair.; Stem Cell Reports, 8: 1714-1726 |
|
GSE95004 |
| Kim, Hark Kyun et al. (2011) A gene expression signature of acquired chemoresistance to cisplatin and fluorouracil combination chemotherapy in gastric cancer patients.; PLoS One, 6: e16694 |
|
GSE14208 GSE14209 |
| Kim, Hee-Dae et al. (2021) Shisa6 mediates cell-type specific regulation of depression in the nucleus accumbens.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE147640 |