List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Kwon, Deug-Nam et al. (2014) Gene expression and pathway analysis of effects of the CMAH deactivation on mouse lung, kidney and heart.; PLoS One, 9: e107559 |
|
GSE59964 |
| Kwon, Deug-Nam et al. (2015) Oxidative stress and ROS metabolism via down-regulation of sirtuin 3 expression in Cmah-null mice affect hearing loss.; Aging (Albany NY), 7: 579-94 |
|
GSE70659 |
| Kwon, Eun-Young et al. (2012) Time-course microarrays reveal early activation of the immune transcriptome and adipokine dysregulation leads to fibrosis in visceral adipose depots during diet-induced obesity.; BMC Genomics, 13: 450 |
|
GSE39549 |
| Kwon, Eunjeong et al. (2018) The RNA-binding protein YBX1 regulates epidermal progenitors at a posttranscriptional level.; Nat Commun, 9: 1734 |
|
GSE110014 |
| Kwon, Jeong-Tae et al. (2021) An amygdala circuit that suppresses social engagement.; Nature, [no vol.]: [no pages] |
|
GSE167176 |
| Kwon, Joonhong et al. (2019) Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice.; Mol Brain, 12: 99 |
|
GSE138240 |
| Kwon, Nayoung et al. (2024) CDK9 phosphorylates RUNX1 to promote megakaryocytic fate in megakaryocytic-erythroid progenitors.; Blood, 144: 1800-1812 |
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GSE232878 GSE232879 |
| Kwon, Oh-Chan et al. (2021) SGK1 inhibition in glia ameliorates pathologies and symptoms in Parkinson disease animal models.; EMBO Mol Med, 13: e13076 |
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GSE106216 GSE145489 |
| Kwong, Kevin et al. (2004) Target ablation-induced regulation of macrophage recruitment into the olfactory epithelium of Mip-1alpha-/- mice and restoration of function by exogenous MIP-1alpha.; Physiol Genomics, 20: 73-86 |
|
GSE1680 |
| Kyawe, Pyae Phyo et al. (2025) CRISPR editing of candidate host factors that impact influenza A virus infection.; Microbiol Spectr, 13: e0262724 |
|
GSE284495 |
| Kyeong, Minjae et al. (2025) Progressive tooth pattern changes in Cilk1-deficient mice depending on Hedgehog signaling.; Int J Oral Sci, 17: 71 |
|
GSE290878 |
| Kyogoku, Chieko et al. (2013) Cell-specific type I IFN signatures in autoimmunity and viral infection: what makes the difference?; PLoS One, 8: e83776 |
|
GSE51997 |
| Kyritsis, Nikos et al. (2021) Diagnostic blood RNA profiles for human acute spinal cord injury.; J Exp Med, 218: [no pages] |
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GSE151371 |
| Kyrkou, Athena et al. (2024) G6PD and ACSL3 are synthetic lethal partners of NF2 in Schwann cells.; Nat Commun, 15: 5115 |
|
GSE219135 |
| Kyrousi, Christina et al. (2021) Extracellular LGALS3BP regulates neural progenitor position and relates to human cortical complexity.; Nat Commun, 12: 6298 |
|
GSE181405 |
| La Starza, Roberta et al. (2013) Linking genomic lesions with minimal residual disease improves prognostic stratification in children with T-cell acute lymphoblastic leukaemia.; Leuk Res, 37: 928-35 |
|
GSE39816.2 |
| Labadorf, Adam et al. (2015) RNA Sequence Analysis of Human Huntington Disease Brain Reveals an Extensive Increase in Inflammatory and Developmental Gene Expression.; PLoS One, 10: e0143563 |
|
GSE64810 GSE159940 |
| Labadorf, Adam et al. (2023) Inflammation and neuronal gene expression changes differ in early versus late chronic traumatic encephalopathy brain.; BMC Med Genomics, 16: 49 |
|
GSE193407 GSE157330 |
| Labaf, Maryam et al. (2022) IncreasedARexpression in castration-resistant prostate cancer rapidly induces AR signaling reprogramming with the collaboration of EZH2.; Front Oncol, 12: 1021845 |
|
GSE211638 |
| Labarta-Bajo, Lara et al. (2023) Protocol for the purification and transcriptomic analysis of mouse astrocytes using GFAT.; STAR Protoc, 4: 102599 |
|
GSE233509 |
| Labbadia, John et al. (2011) Altered chromatin architecture underlies progressive impairment of the heat shock response in mouse models of Huntington disease.; J Clin Invest, 121: 3306-19 |
|
GSE29681 |
| Labbé, Katherine et al. (2024) Specific activation of the integrated stress response uncovers regulation of central carbon metabolism and lipid droplet biogenesis.; Nat Commun, 15: 8301 |
|
GSE273599 |
| Laberthonnière, Camille et al. (2021) AKT Signaling Modifies the Balance between Cell Proliferation and Migration in Neural Crest Cells from Patients Affected with Bosma Arhinia and Microphthalmia Syndrome.; Biomedicines, 9: [no pages] |
|
GSE173251 |
| Labonté, Benoit et al. (2017) Sex-specific transcriptional signatures in human depression.; Nat Med, 23: 1102-1111 |
|
GSE102556.2 GSE102556.1 |
| LaBreche, Heather G et al. (2011) Integrating factor analysis and a transgenic mouse model to reveal a peripheral blood predictor of breast tumors.; BMC Med Genomics, 4: 61 |
|
GSE27563 GSE27562 |
| LaBreche, Heather G et al. (2011) Peripheral blood signatures of lead exposure.; PLoS One, 6: e23043 |
|
GSE28261 |
| Labrie, Viviane et al. (2009) Serine racemase is associated with schizophrenia susceptibility in humans and in a mouse model.; Hum Mol Genet, 18: 3227-43 |
|
GSE13974 |
| Labuza, Amanda et al. (2025) Frontal cortex pyramidal neuron expression profiles differentiate the prodromal stage from progressive degeneration across the Alzheimer's disease spectrum.; Alzheimers Dement, 21: e70395 |
|
GSE285831 |
| Lacaze, Paul et al. (2009) Combined genome-wide expression profiling and targeted RNA interference in primary mouse macrophages reveals perturbation of transcriptional networks associated with interferon signalling.; BMC Genomics, 10: 372 |
|
GSE14534 |
| Lachen-Montes, Mercedes et al. (2017) Progressive modulation of the human olfactory bulb transcriptome during Alzheimer´s disease evolution: novel insights into the olfactory signaling across proteinopathies.; Oncotarget, 8: 69663-69679 |
|
GSE93885 |
| Lachen-Montes, Mercedes et al. (2019) Early-Onset Molecular Derangements in the Olfactory Bulb of Tg2576 Mice: Novel Insights Into the Stress-Responsive Olfactory Kinase Dynamics in Alzheimer's Disease.; Front Aging Neurosci, 11: 141 |
|
GSE106643 |
| Lachmandas, Ekta et al. (2019) Metformin Alters Human Host Responses to Mycobacterium tuberculosis in Healthy Subjects.; J Infect Dis, 220: 139-150 |
|
GSE102633 GSE102677 |
| Lachén-Montes, Mercedes et al. (2022) Metabolic dyshomeostasis induced by SARS-CoV-2 structural proteins reveals immunological insights into viral olfactory interactions.; Front Immunol, 13: 866564 |
|
GSE182849 |
| Lackie, Rachel E et al. (2020) Modulation of hippocampal neuronal resilience during aging by the Hsp70/Hsp90 co-chaperone STI1.; J Neurochem, 153: 727-758 |
|
GSE111114 |
| Laddach, Anna et al. (2023) A branching model of lineage differentiation underpinning the neurogenic potential of enteric glia.; Nat Commun, 14: 5904 |
|
GSE240636 |
| Laderas, Ted G et al. (2011) Computational detection of alternative exon usage.; Front Neurosci, 5: 69 |
|
GSE27282 |
| Ladewig, Julia et al. (2012) Small molecules enable highly efficient neuronal conversion of human fibroblasts.; Nat Methods, 9: 575-8 |
|
GSE36246 |
| Ladha, Jayashree et al. (2012) Identification of genomic targets of transcription factor AEBP1 and its role in survival of glioma cells.; Mol Cancer Res, 10: 1039-51 |
|
GSE18892 |
| Ladner, Liliana R et al. (2024) The weight of multiple hits: how TBI and infectious encephalitis co-modulate adverse outcomes.; Brain Inj, 39: 588-597 |
|
GSE266235 |
| Lafaille, Fabien G et al. (2012) Impaired intrinsic immunity to HSV-1 in human iPSC-derived TLR3-deficient CNS cells.; Nature, 491: 769-73 |
|
GSE40593 |
| Lafargue, Audrey et al. (2025) Twist1-induced suppression of oncogene-induced senescence in non-small cell lung cancer requires the transactivation domain of Twist1.; Neoplasia, 66: 101179 |
|
GSE270902 |
| LaFever, Brandon J et al. (2022) Pathological consequences of chronic olfactory inflammation on neurite morphology of olfactory bulb projection neurons.; Brain Behav Immun Health, 21: 100451 |
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GSE185945 |
| Laffaire, Julien et al. (2009) Gene expression signature of cerebellar hypoplasia in a mouse model of Down syndrome during postnatal development.; BMC Genomics, 10: 138 |
|
GSE11472 |
| Lafferty-Whyte, K et al. (2009) A gene expression signature classifying telomerase and ALT immortalization reveals an hTERT regulatory network and suggests a mesenchymal stem cell origin for ALT.; Oncogene, 28: 3765-74 |
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GSE14529 GSE14487 |
| Lafferty-Whyte, Kyle et al. (2010) TCEAL7 inhibition of c-Myc activity in alternative lengthening of telomeres regulates hTERT expression.; Neoplasia, 12: 405-14 |
|
GSE17118 |
| Lafleur, Sarah et al. (2023) Multi-Omics Data Integration Reveals Key Variables Contributing to Subgingival Microbiome Dysbiosis-Induced Inflammatory Response in a Hyperglycemic Microenvironment.; Int J Mol Sci, 24: [no pages] |
|
GSE222883 |
| LaForce, Geneva R et al. (2022) Suppression of premature transcription termination leads to reduced mRNA isoform diversity and neurodegeneration.; Neuron, 110: 1340-1357.e7 |
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GSE183870 |
| Lagali, Pamela S et al. (2016) Retinal interneuron survival requires non-cell-autonomous Atrx activity.; Hum Mol Genet, 25: 4787-4803 |
|
GSE78877 |
| Lager, Angela M et al. (2018) Rapid functional genetics of the oligodendrocyte lineage using pluripotent stem cells.; Nat Commun, 9: 3708 |
|
GSE97444 |
| Lagier-Tourenne, Clotilde et al. (2012) Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs.; Nat Neurosci, 15: 1488-97 |
|
GSE40652 |
| Lagier-Tourenne, Clotilde et al. (2013) Targeted degradation of sense and antisense C9orf72 RNA foci as therapy for ALS and frontotemporal degeneration.; Proc Natl Acad Sci U S A, 110: E4530-9 |
|
GSE51684 GSE51685 |
| Lagresle-Peyrou, Chantal et al. (2018) Plerixafor enables safe, rapid, efficient mobilization of hematopoietic stem cells in sickle cell disease patients after exchange transfusion.; Haematologica, 103: 778-786 |
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GSE102881 |
| Laguesse, Sophie et al. (2015) A Dynamic Unfolded Protein Response Contributes to the Control of Cortical Neurogenesis.; Dev Cell, 35: 553-567 |
|
GSE74683.1 |
| Laguillaumie, Marie-Océane et al. (2024) Deciphering genetic and nongenetic factors underlying tumour dormancy: insights from multiomics analysis of two syngeneic MRD models of melanoma and leukemia.; Biol Res, 57: 59 |
|
GSE250145 |
| Laguna-Fernández, Andrés et al. (2015) Endothelial transcriptomic changes induced by oxidized low density lipoprotein disclose an up-regulation of Jak-Stat pathway.; Vascul Pharmacol, 73: 104-14 |
|
GSE29881 |
| Lahousse, Stephanie A et al. (2006) Testicular gene expression profiling following prepubertal rat mono-(2-ethylhexyl) phthalate exposure suggests a common initial genetic response at fetal and prepubertal ages.; Toxicol Sci, 93: 369-81 |
|
GSE4514 |
| Lai, Andrea Z et al. (2014) Dynamic reprogramming of signaling upon met inhibition reveals a mechanism of drug resistance in gastric cancer.; Sci Signal, 7: ra38 |
|
GSE54532 |
| Lai, Bi-Qin et al. (2025) DON-Apt19S bioactive scaffold transplantation promotesin situspinal cord repair in rats with transected spinal cord injury by effectively recruiting endogenous neural stem cells and mesenchymal stem cells.; Mater Today Bio, 32: 101753 |
|
GSE245409 |
| Lai, Catherine Chinhchu et al. (2022) Neuroinflammation Plays a Critical Role in Cerebral Cavernous Malformation Disease.; Circ Res, 131: 909-925 |
|
GSE204979 |
| Lai, Chun-Fui et al. (2013) Co-regulated gene expression by oestrogen receptor ? and liver receptor homolog-1 is a feature of the oestrogen response in breast cancer cells.; Nucleic Acids Res, 41: 10228-40 |
|
GSE47803 |
| Lai, Helen C et al. (2011) In vivo neuronal subtype-specific targets of Atoh1 (Math1) in dorsal spinal cord.; J Neurosci, 31: 10859-71 |
|
GSE23089 |
| Lai, Jesse D et al. (2024) KCNJ2 inhibition mitigates mechanical injury in a human brain organoid model of traumatic brain injury.; Cell Stem Cell, 31: 519-536.e8 |
|
GSE259432 |
| Lai, Joseph Chieh-Yu et al. (2024) Interrogation of the interplay between DNA N6-methyladenosine (6mA) and hypoxia-induced chromatin accessibility by a randomized empirical model (EnrichShuf).; Nucleic Acids Res, 52: 13605-13624 |
|
GSE260872 |
| Lai, Mingqiang et al. (2025) Brown adipose tissue secretes OLFM4 to coordinate sensory and sympathetic innervation via Schwann cells.; Nat Commun, 16: 5206 |
|
GSE243317 |
| Lai, Ting-Yu et al. (2013) Transcription of Tnfaip3 is regulated by NF-?B and p38 via C/EBP? in activated macrophages.; PLoS One, 8: e73153 |
|
GSE46361 |
| Lai, Wenfang et al. (2015) Salidroside-Mediated Neuroprotection is Associated with Induction of Early Growth Response Genes (Egrs) Across a Wide Therapeutic Window.; Neurotox Res, 28: 108-21 |
|
GSE52001 |
| Lai, Wi S et al. (2006) Novel mRNA targets for tristetraprolin (TTP) identified by global analysis of stabilized transcripts in TTP-deficient fibroblasts.; Mol Cell Biol, 26: 9196-208 |
|
GSE5324 |
| Lai, Xingqiang et al. (2021) SOX10 ablation severely impairs the generation of postmigratory neural crest from human pluripotent stem cells.; Cell Death Dis, 12: 814 |
|
GSE160312 |
| Lai, Yinzhi et al. (2011) Neural cell 3D microtissue formation is marked by cytokines' up-regulation.; PLoS One, 6: e26821 |
|
GSE13715 |
| Lai, Yinzhi et al. (2012) Three dimensional neuronal cell cultures more accurately model voltage gated calcium channel functionality in freshly dissected nerve tissue.; PLoS One, 7: e45074 |
|
GSE30498 |
| Laibe, Sophy et al. (2012) A seven-gene signature aggregates a subgroup of stage II colon cancers with stage III.; OMICS, 16: 560-5 |
|
GSE37892 |
| Laich, Yannik et al. (2022) Single-Cell Protein and Transcriptional Characterization of Epiretinal Membranes From Patients With Proliferative Vitreoretinopathy.; Invest Ophthalmol Vis Sci, 63: 17 |
|
GSE179603 |
| Laifenfeld, Daphna et al. (2010) The role of hypoxia in 2-butoxyethanol-induced hemangiosarcoma.; Toxicol Sci, 113: 254-66 |
|
GSE17266 GSE17794 GSE17796 |
| Laighneach, Aodán et al. (2023) Social isolation-induced transcriptomic changes in mouse hippocampus impact the synapse and show convergence with human genetic risk for neurodevelopmental phenotypes.; PLoS One, 18: e0295855 |
|
GSE246551 |
| Laiho, P et al. (2007) Serrated carcinomas form a subclass of colorectal cancer with distinct molecular basis.; Oncogene, 26: 312-20 |
|
GSE4045 |
| Laine, Mikaela A et al. (2018) Genetic Control of Myelin Plasticity after Chronic Psychosocial Stress.; eNeuro, 5: [no pages] |
|
GSE109315 |
| Laitman, Benjamin M et al. (2016) The Transcriptional Activator Krüppel-like Factor-6 Is Required for CNS Myelination.; PLoS Biol, 14: e1002467 |
|
GSE79244 |
| Lajqi, Trim et al. (2019) Memory-Like Inflammatory Responses of Microglia to Rising Doses of LPS: Key Role of PI3K?.; Front Immunol, 10: 2492 |
|
GSE137741 |
| Lakatos, Anita et al. (2017) Integrated analysis of genetic, behavioral, and biochemical data implicates neural stem cell-induced changes in immunity, neurotransmission and mitochondrial function in Dementia with Lewy Body mice.; Acta Neuropathol Commun, 5: 21 |
|
GSE95546 |
| Lakschevitz, Flavia S et al. (2013) Oral neutrophil transcriptome changes result in a pro-survival phenotype in periodontal diseases.; PLoS One, 8: e68983 |
|
GSE43525 |
| Lal, Ashish et al. (2009) miR-24 Inhibits cell proliferation by targeting E2F2, MYC, and other cell-cycle genes via binding to "seedless" 3'UTR microRNA recognition elements.; Mol Cell, 35: 610-25 |
|
GSE17828 |
| Lala-Tabbert, Neena et al. (2021) CCAAT/enhancer-binding protein beta promotes muscle stem cell quiescence through regulation of quiescence-associated genes.; Stem Cells, 39: 345-357 |
|
GSE152053 |
| Lalancette, Claudia et al. (2009) Identification of human sperm transcripts as candidate markers of male fertility.; J Mol Med (Berl), 87: 735-48 |
|
GSE14078 |
| Lall, Deepti et al. (2021) C9orf72 deficiency promotes microglial-mediated synaptic loss in aging and amyloid accumulation.; Neuron, 109: 2275-2291.e8 |
|
GSE164675 |
| Lam, Brenda Wan Shing et al. (2024) Activation of S1P2is protective against cisplatin-induced peripheral neuropathy.; Cell Prolif, 57: e13549 |
|
GSE235877 |
| Lam, Hung-Ming et al. (2020) Durable Response of Enzalutamide-resistant Prostate Cancer to Supraphysiological Testosterone Is Associated with a Multifaceted Growth Suppression and Impaired DNA Damage Response Transcriptomic Program in Patient-derived Xenografts.; Eur Urol, 77: 144-155 |
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GSE124704.2 GSE124704.1 |
| LaMarca, Heather L et al. (2010) CCAAT/enhancer binding protein beta regulates stem cell activity and specifies luminal cell fate in the mammary gland.; Stem Cells, 28: 535-44 |
|
GSE16380 |
| Lamas, Bruno et al. (2016) CARD9 impacts colitis by altering gut microbiota metabolism of tryptophan into aryl hydrocarbon receptor ligands.; Nat Med, 22: 598-605 |
|
GSE67577 |