List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Kumar, Satheesh et al. (2024) Characterization of RNA editing and gene therapy with a compact CRISPR-Cas13 in the retina.; Proc Natl Acad Sci U S A, 121: e2408345121 |
|
GSE259220.2 GSE259220.1 |
| Kumar, Satish et al. (2020) Role of miRNA-mRNA Interaction in Neural Stem Cell Differentiation of Induced Pluripotent Stem Cells.; Int J Mol Sci, 21: [no pages] |
|
GSE156617 |
| Kumar, Satish et al. (2025) Neurocellular Stress Response to Mojave Type A Rattlesnake Venom: Study of Molecular Mechanisms Using Human iPSC-Derived Neural Stem Cell Model.; Biomolecules, 15: [no pages] |
|
GSE287744 |
| Kumar, Shaji K et al. (2011) Impact of gene expression profiling-based risk stratification in patients with myeloma receiving initial therapy with lenalidomide and dexamethasone.; Blood, 118: 4359-62 |
|
GSE31504 |
| Kumar, Subodh et al. (2025) Integrated multi-omics analyses of synaptosomes revealed synapse-associated novel targets in Alzheimer's disease.; Mol Psychiatry, 30: 5121-5136 |
|
GSE276756 |
| Kumaraswamy, Anbarasu et al. (2023) LSD1 promotes prostate cancer reprogramming by repressing TP53 signaling independently of its demethylase function.; JCI Insight, 8: [no pages] |
|
GSE218993.1 GSE218993.2 |
| Kumari, Bharti et al. (2016) Dynamic changes in global microRNAome and transcriptome reveal complex miRNA-mRNA regulated host response to Japanese Encephalitis Virus in microglial cells.; Sci Rep, 6: 20263 |
|
GSE57330 |
| Kumari, Snehlata et al. (2014) Epidermal RelA specifically restricts contact allergen-induced inflammation and apoptosis in skin.; J Invest Dermatol, 134: 2541-2550 |
|
GSE56067 |
| Kumazaki, Masafumi et al. (2013) Comparative effects of statins on murine cardiac gene expression profiles in normal mice.; Eur J Pharmacol, 707: 71-7 |
|
GSE23101 |
| Kummar, Shivaani et al. (2013) Cediranib for metastatic alveolar soft part sarcoma.; J Clin Oncol, 31: 2296-302 |
|
GSE32569 |
| Kummer, Kai K et al. (2017) Signatures of Altered Gene Expression in Dorsal Root Ganglia of a Fabry Disease Mouse Model.; Front Mol Neurosci, 10: 449 |
|
GSE104625 |
| Kummer, Kai K et al. (2018) Altered Gene Expression in Prefrontal Cortex of a Fabry Disease Mouse Model.; Front Mol Neurosci, 11: 201 |
|
GSE110645 |
| Kummer, Markus P et al. (2021) Microglial PD-1 stimulation by astrocytic PD-L1 suppresses neuroinflammation and Alzheimer's disease pathology.; EMBO J, 40: e108662 |
|
GSE77643 |
| Kunarso, Galih et al. (2010) Transposable elements have rewired the core regulatory network of human embryonic stem cells.; Nat Genet, 42: 631-4 |
|
GSE21135 |
| Kunath, Nicolas et al. (2021) DNA repair enzyme NEIL3 enables a stable neural representation of space by shaping transcription in hippocampal neurons.; iScience, 24: 103470 |
|
GSE148408 |
| Kunderfranco, Paolo et al. (2010) ETS transcription factors control transcription of EZH2 and epigenetic silencing of the tumor suppressor gene Nkx3.1 in prostate cancer.; PLoS One, 5: e10547 |
|
GSE14206 |
| Kundu, Sharmistha et al. (2017) Polycomb Repressive Complex 1 Generates Discrete Compacted Domains that Change during Differentiation.; Mol Cell, 65: 432-446.e5 |
|
GSE89945 |
| Kuner, Ruprecht et al. (2009) Global gene expression analysis reveals specific patterns of cell junctions in non-small cell lung cancer subtypes.; Lung Cancer, 63: 32-8 |
|
GSE10245 |
| Kuner, Ruprecht et al. (2013) The maternal embryonic leucine zipper kinase (MELK) is upregulated in high-grade prostate cancer.; J Mol Med (Berl), [no vol.]: [no pages] |
|
GSE36531 GSE32571 |
| Kung, Che-Pei et al. (2015) Identification of TRIML2, a novel p53 target, that enhances p53 SUMOylation and regulates the transactivation of proapoptotic genes.; Mol Cancer Res, 13: 250-62 |
|
GSE61124 |
| Kung, Che-Pei et al. (2025) ADAR1 Regulates Lipid Remodeling through MDM2 to Dictate Ferroptosis Sensitivity.; bioRxiv, [no vol.]: [no pages] |
|
GSE286185 |
| Kung, Mei-Lang et al. (2024) Deficiency of ADAR2 ameliorates metabolic-associated fatty liver disease via AMPK signaling pathways in obese mice.; Commun Biol, 7: 594 |
|
GSE261185 |
| Kunii, Kenshirou et al. (2025) CaOx crystal nuclei are formed in rat outer cortex proximal tubules by a potential fibrinogen-dependent mechanism.; PLoS One, 20: e0328721 |
|
GSE269407 |
| Kuninger, David et al. (2006) Muscle cell survival mediated by the transcriptional coactivators p300 and PCAF displays different requirements for acetyltransferase activity.; Am J Physiol Cell Physiol, 291: C699-709 |
|
GSE4224 |
| Kunkel, Thaddeus J et al. (2023) The cholesterol transporter NPC1 is essential for epigenetic regulation and maturation of oligodendrocyte lineage cells.; Nat Commun, 14: 3964 |
|
GSE221336 |
| Kuntz-Melcavage, Kara L et al. (2009) Gene expression changes following extinction testing in a heroin behavioral incubation model.; BMC Neurosci, 10: 95 |
|
GSE13166 |
| Kuo, Hsu-Ping et al. (2017) Combination of Ibrutinib and ABT-199 in Diffuse Large B-Cell Lymphoma and Follicular Lymphoma.; Mol Cancer Ther, 16: 1246-1256 |
|
GSE93984 |
| Kuo, Wen-Hung et al. (2012) Molecular characteristics and metastasis predictor genes of triple-negative breast cancer: a clinical study of triple-negative breast carcinomas.; PLoS One, 7: e45831 |
|
GSE33926 |
| Kuo, Winston Patrick et al. (2006) A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies.; Nat Biotechnol, 24: 832-40 |
|
GSE4830 |
| Kupfer, Doris M et al. (2013) Microarray characterization of gene expression changes in blood during acute ethanol exposure.; BMC Med Genomics, 6: 26 |
|
GSE20489 |
| Kupfer, Sonia S et al. (2013) Comparison of cellular and transcriptional responses to 1,25-dihydroxyvitamin d3 and glucocorticoids in peripheral blood mononuclear cells.; PLoS One, 8: e76643 |
|
GSE50012 |
| Kurahashi, Issei et al. (2013) A microarray-based gene expression analysis to identify diagnostic biomarkers for unknown primary cancer.; PLoS One, 8: e63249 |
|
GSE42392 |
| Kuramoto, Takashi et al. (2017) Identification of Candidate Genes for Generalized Tonic-Clonic Seizures in Noda Epileptic Rat.; Behav Genet, 47: 609-619 |
|
GSE100366 |
| Kurashina, Ryosuke et al. (2009) Anti-proliferative activity of heat shock protein (Hsp) 90 inhibitors via beta-catenin/TCF7L2 pathway in adult T cell leukemia cells.; Cancer Lett, [no vol.]: [no pages] |
|
GSE12287 |
| Kurata, Keiji et al. (2023) Prolyl-tRNA synthetase as a novel therapeutic target in multiple myeloma.; Blood Cancer J, 13: 12 |
|
GSE186445 |
| Kurata, Morito et al. (2021) C/EBPβ induces B-cell acute lymphoblastic leukemia and cooperates with BLNK mutations.; Cancer Sci, 112: 4920-4930 |
|
GSE110737 |
| Kurata, Morito et al. (2022) Proliferation and Self-Renewal Are Differentially Sensitive to NRASG12V Oncogene Levels in an Acute Myeloid Leukemia Cell Line.; Mol Cancer Res, 20: 1646-1658 |
|
GSE115911 |
| Kuriakose, M A et al. (2004) Selection and validation of differentially expressed genes in head and neck cancer.; Cell Mol Life Sci, 61: 1372-83 |
|
GSE6631 |
| Kurian, S M et al. (2014) Molecular classifiers for acute kidney transplant rejection in peripheral blood by whole genome gene expression profiling.; Am J Transplant, 14: 1164-72 |
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GSE15296 |
| Kurian, Sunil M et al. (2009) Biomarkers for early and late stage chronic allograft nephropathy by proteogenomic profiling of peripheral blood.; PLoS One, 4: e6212 |
|
GSE12187 |
| Kurihara, Taiga et al. (2025) Enhancement of memory and emotional functions by long-term ingestion of protease-treated porcine liver extract in mice.; Sci Rep, 15: 18694 |
|
GSE289386 |
| Kuriki, Mao et al. (2020) Transient and lineage-restricted requirement of Ebf3 for sternum ossification.; Development, 147: [no pages] |
|
GSE149869 |
| Kurimchak, Alison M et al. (2016) Resistance to BET Bromodomain Inhibitors Is Mediated by Kinome Reprogramming in Ovarian Cancer.; Cell Rep, 16: 1273-1286 |
|
GSE82329 |
| Kurimoto, Kazuki et al. (2008) Complex genome-wide transcription dynamics orchestrated by Blimp1 for the specification of the germ cell lineage in mice.; Genes Dev, 22: 1617-35 |
|
GSE11128 |
| Kurishev, Artemiy O et al. (2025) Schizophrenia risk gene ZNF536 modulates retinoic acid response and neuronal gene networks in SH-SY5Y cells.; Front Mol Neurosci, 18: 1671354 |
|
GSE304368 |
| Kurki, Mitja I et al. (2011) Upregulated signaling pathways in ruptured human saccular intracranial aneurysm wall: an emerging regulative role of Toll-like receptor signaling and nuclear factor-?B, hypoxia-inducible factor-1A, and ETS transcription factors.; Neurosurgery, 68: 1667-75; discussion 1675-6 |
|
GSE13353 |
| Kurmann, Lisa et al. (2021) Transcryptomic Analysis of Human Brain-Microvascular Endothelial Response to -Pericytes: Cell Orientation Defines Barrier Function.; Cells, 10: [no pages] |
|
GSE168514 |
| Kurniawan, Henry et al. (2025) The Parkinson's disease-associated LRRK2-G2019S variant restricts serine metabolism, leading to microglial inflammation and dopaminergic neuron degeneration.; J Neuroinflammation, 22: 244 |
|
GSE282494 |
| Kuroda, Keiji et al. (2013) Induction of 11?-HSD 1 and activation of distinct mineralocorticoid receptor- and glucocorticoid receptor-dependent gene networks in decidualizing human endometrial stromal cells.; Mol Endocrinol, 27: 192-202 |
|
GSE42538 |
| Kuroda, Takuya et al. (2017) Identification of a Gene Encoding Slow Skeletal Muscle Troponin T as a Novel Marker for Immortalization of Retinal Pigment Epithelial Cells.; Sci Rep, 7: 8163 |
|
GSE80985 |
| Kuroda, Takuya et al. (2024) ROR2 expression predicts human induced pluripotent stem cell differentiation into neural stem/progenitor cells and GABAergic neurons.; Sci Rep, 14: 690 |
|
GSE233228 |
| Kuroki, Shunsuke et al. (2013) Epigenetic regulation of mouse sex determination by the histone demethylase Jmjd1a.; Science, 341: 1106-9 |
|
GSE49513 |
| Kurosaki, Tatsuaki et al. (2021) NMD abnormalities during brain development in the Fmr1-knockout mouse model of fragile X syndrome.; Genome Biol, 22: 317 |
|
GSE180135 |
| Kurosaki, Tatsuaki et al. (2022) Integrative omics indicate FMRP sequesters mRNA from translation and deadenylation in human neuronal cells.; Mol Cell, 82: 4564-4581.e11 |
|
GSE197221 |
| Kurosawa, Masaru et al. (2015) Depletion of p62 reduces nuclear inclusions and paradoxically ameliorates disease phenotypes in Huntington's model mice.; Hum Mol Genet, 24: 1092-105 |
|
GSE62210 |
| Kurosawa, Ryo et al. (2021) Impact of spaceflight and artificial gravity on sulfur metabolism in mouse liver: sulfur metabolomic and transcriptomic analysis.; Sci Rep, 11: 21786 |
|
GSE240751 |
| Kurotsu, Shota et al. (2020) Soft Matrix Promotes Cardiac Reprogramming via Inhibition of YAP/TAZ and Suppression of Fibroblast Signatures.; Stem Cell Reports, 15: 612-628 |
|
GSE125811 |
| Kurz, A et al. (2010) Alpha-synuclein deficiency affects brain Foxp1 expression and ultrasonic vocalization.; Neuroscience, 166: 785-95 |
|
GSE19534 |
| Kurz, Alexander et al. (2010) A53T-alpha-synuclein overexpression impairs dopamine signaling and striatal synaptic plasticity in old mice.; PLoS One, 5: e11464 |
|
GSE20547 |
| Kurzawa-Akanbi, Marzena et al. (2022) Retinal pigment epithelium extracellular vesicles are potent inducers of age-related macular degeneration disease phenotype in the outer retina.; J Extracell Vesicles, 11: e12295 |
|
GSE190263 |
| Kurzejamska, E et al. (2014) C/EBPβ expression is an independent predictor of overall survival in breast cancer patients by MHCII/CD4-dependent mechanism of metastasis formation.; Oncogenesis, 3: e125 |
|
GSE40825 |
| Kusaka, M et al. (2005) Gene expression profile in rat renal isografts from brain dead donors.; Transplant Proc, 37: 364-6 |
|
GSE5104 |
| Kusaka, Mamoru et al. (2010) Serum tissue inhibitor of metalloproteinases 1 (TIMP-1) predicts organ recovery from delayed graft function after kidney transplantation from donors after cardiac death.; Cell Transplant, 19: 723-9 |
|
GSE10419 |
| Kusebauch, Ulrike et al. (2016) Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome.; Cell, 166: 766-78 |
|
GSE83654 |
| Kushal, Swati et al. (2013) Protein domain mimetics as in vivo modulators of hypoxia-inducible factor signaling.; Proc Natl Acad Sci U S A, 110: 15602-7 |
|
GSE48002 |
| Kushamae, Mika et al. (2020) Involvement of neutrophils in machineries underlying the rupture of intracranial aneurysms in rats.; Sci Rep, 10: 20004 |
|
GSE161044 |
| Kushinsky, Dahlia et al. (2024) Daily light-induced transcription in visual cortex neurons drives downward firing rate homeostasis and stabilizes sensory processing.; Cell Rep, 43: 114701 |
|
GSE216973 |
| Kusterer, Mira et al. (2025) Dynamic evolution of TCF3-PBX1 leukemias at the single-cell level under chemotherapy pressure.; Hemasphere, 9: e70071 |
|
GSE233937 |
| Kustermann, Monika et al. (2023) Adoptively Transferred in vitro-Generated Myeloid-Derived Suppressor Cells Improve T-Cell Function and Antigen-Specific Immunity after Traumatic Lung Injury.; J Innate Immun, 15: 78-95 |
|
GSE188171 |
| Kusumanchi, Praveen et al. (2021) Stress-Responsive Gene FK506-Binding Protein 51 Mediates Alcohol-Induced Liver Injury Through the Hippo Pathway and Chemokine (C-X-C Motif) Ligand 1 Signaling.; Hepatology, 74: 1234-1250 |
|
GSE155830 |
| Kutlu, B et al. (2009) Meta-analysis of gene expression in human pancreatic islets after in vitro expansion.; Physiol Genomics, 39: 72-81 |
|
GSE15543 |
| Kutsche, Lisa K et al. (2018) Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis.; Cell Syst, 7: 438-452.e8 |
|
GSE118310 GSE118307 GSE118315 |
| Kuusisto, Finn et al. (2019) Machine learning to predict developmental neurotoxicity with high-throughput data from 2D bio-engineered tissues.; Proc Int Conf Mach Learn Appl, 2019: 293-298 |
|
GSE126786 |
| Kuwano, Yuki et al. (2011) Autism-associated gene expression in peripheral leucocytes commonly observed between subjects with autism and healthy women having autistic children.; PLoS One, 6: e24723 |
|
GSE26415 |
| Kuwata, Yasuhiro et al. (2025) Characterizing hypoxia-orchestrated post-stroke changes in oligodendrocyte precursor cells for optimized cell therapy.; Stem Cell Reports, 20: 102687 |
|
GSE275670 |
| Kuzmichev, Andrey N et al. (2012) Sox2 acts through Sox21 to regulate transcription in pluripotent and differentiated cells.; Curr Biol, 22: 1705-10 |
|
GSE28465 |
| Kuzniewska, Bozena et al. (2016) Adult Deletion of SRF Increases Epileptogenesis and Decreases Activity-Induced Gene Expression.; Mol Neurobiol, 53: 1478-1493 |
|
GSE60772 |
| Kuzniewska, Bozena et al. (2020) Mitochondrial protein biogenesis in the synapse is supported by local translation.; EMBO Rep, 21: e48882 |
|
GSE122724 |
| Kuznitsov-Yanovsky, Liron et al. (2022) Transcriptomic Analysis of Human Fragile X Syndrome Neurons Reveals Neurite Outgrowth Modulation by the TGFβ/BMP Pathway.; Int J Mol Sci, 23: [no pages] |
|
GSE206088 |
| Kvinlaug, Brynn T et al. (2011) Common and overlapping oncogenic pathways contribute to the evolution of acute myeloid leukemias.; Cancer Res, 71: 4117-29 |
|
GSE24797 |
| Kwa, Mei Qi et al. (2021) MRCK? Is Dispensable for Breast Cancer Development in the MMTV-PyMT Model.; Cells, 10: [no pages] |
|
GSE169000 |
| Kwak, Myung Ji et al. (2022) Differential transcriptome profile underlying risky choice in a rat gambling task.; J Behav Addict, 11: 845-857 |
|
GSE181296 |
| Kwak, Tae Hwan et al. (2020) Generation of homogeneous midbrain organoids with in vivo-like cellular composition facilitates neurotoxin-based Parkinson's disease modeling.; Stem Cells, 38: 727-740 |
|
GSE122729 |
| Kwak, Young Don et al. (2021) Chromatin architecture at susceptible gene loci in cerebellar Purkinje cells characterizes DNA damage-induced neurodegeneration.; Sci Adv, 7: eabg6363 |
|
GSE174840 GSE174841 |
| Kwan, Tony et al. (2007) Heritability of alternative splicing in the human genome.; Genome Res, 17: 1210-8 |
|
GSE7952 |
| Kwan, Tony et al. (2008) Genome-wide analysis of transcript isoform variation in humans.; Nat Genet, 40: 225-31 |
|
GSE9372 |
| Kwapis, Janine L et al. (2018) Epigenetic regulation of the circadian gene Per1 contributes to age-related changes in hippocampal memory.; Nat Commun, 9: 3323 |
|
GSE94832 |
| Kwart, Dylan et al. (2019) A Large Panel of Isogenic APP and PSEN1 Mutant Human iPSC Neurons Reveals Shared Endosomal Abnormalities Mediated by APP β-CTFs, Not Aβ.; Neuron, 104: 256-270.e5 |
|
GSE128343 |
| Kwekel, Joshua C et al. (2010) Age and sex dependent changes in liver gene expression during the life cycle of the rat.; BMC Genomics, 11: 675 |
|
GSE21335 |
| Kwekel, Joshua C et al. (2013) Sex differences in kidney gene expression during the life cycle of F344 rats.; Biol Sex Differ, 4: 14 |
|
GSE47070 |
| Kwik, Markus et al. (2021) Selective Activation of CNS and ReferencePPARGC1APromoters Is Associated with Distinct Gene Programs Relevant for Neurodegenerative Diseases.; Int J Mol Sci, 22: [no pages] |
|
GSE171992 |
| Kwon, Deborah Y et al. (2022) Neuronal Yin Yang1 in the prefrontal cortex regulates transcriptional and behavioral responses to chronic stress in mice.; Nat Commun, 13: 55 |
|
GSE145970.1 |
| Küry, Sébastien et al. (2025) Investigating the neuronal role of the proteasomal ATPase subunit gene PSMC5 in neurodevelopmental proteasomopathies.; Nat Commun, 16: 10545 |
|
GSE288665.1 GSE288665.2 |