List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Krishnan, Neeraja M et al. (2016) A Minimal DNA Methylation Signature in Oral Tongue Squamous Cell Carcinoma Links Altered Methylation with Tumor Attributes.; Mol Cancer Res, 14: 805-19 |
|
GSE75538 |
| Krishnan, Vaidehi et al. (2018) TGFβ Promotes Genomic Instability after Loss of RUNX3.; Cancer Res, 78: 88-102 |
|
GSE133037 |
| Krishnan, Vaishnav et al. (2007) Molecular adaptations underlying susceptibility and resistance to social defeat in brain reward regions.; Cell, 131: 391-404 |
|
GSE8870 |
| Kristensen, Ulrik et al. (2013) Regulatory interplay of Cockayne syndrome B ATPase and stress-response gene ATF3 following genotoxic stress.; Proc Natl Acad Sci U S A, 110: E2261-70 |
|
GSE57923 |
| Krivega, Ivan et al. (2014) Role of LDB1 in the transition from chromatin looping to transcription activation.; Genes Dev, 28: 1278-90 |
|
GSE54549 |
| Krivtsov, Andrei V et al. (2006) Transformation from committed progenitor to leukaemia stem cell initiated by MLL-AF9.; Nature, 442: 818-22 |
|
GSE3722 GSE3725 |
| Krivtsov, Andrei V et al. (2008) H3K79 methylation profiles define murine and human MLL-AF4 leukemias.; Cancer Cell, 14: 355-68 |
|
GSE12310 |
| Kroeze, Yvet et al. (2018) Transcriptome Analysis Identifies Multifaceted Regulatory Mechanisms Dictating a Genetic Switch from Neuronal Network Establishment to Maintenance During Postnatal Prefrontal Cortex Development.; Cereb Cortex, 28: 833-851 |
|
GSE79860 |
| Krohn, Markus et al. (2011) Cerebral amyloid-? proteostasis is regulated by the membrane transport protein ABCC1 in mice.; J Clin Invest, 121: 3924-31 |
|
GSE30762 |
| Krol, Jacek et al. (2010) Characterizing light-regulated retinal microRNAs reveals rapid turnover as a common property of neuronal microRNAs.; Cell, 141: 618-31 |
|
GSE20396 |
| Krolewski, Richard C et al. (2013) Global expression profiling of globose basal cells and neurogenic progression within the olfactory epithelium.; J Comp Neurol, 521: 833-59 |
|
GSE37581 |
| Krolick, Kristen N et al. (2024) Subregion-specific transcriptomic profiling of rat brain reveals sex-distinct gene expression impacted by adolescent stress.; Neuroscience, 553: 19-39 |
|
GSE169296 |
| Kronenberg, Golo et al. (2018) Distinguishing features of microglia- and monocyte-derived macrophages after stroke.; Acta Neuropathol, 135: 551-568 |
|
GSE64811 |
| Kronman, Hope et al. (2019) Biology and Bias in Cell Type-Specific RNAseq of Nucleus Accumbens Medium Spiny Neurons.; Sci Rep, 9: 8350 |
|
GSE121199 |
| Kronman, Hope et al. (2021) Long-term behavioral and cell-type-specific molecular effects of early life stress are mediated by H3K79me2 dynamics in medium spiny neurons.; Nat Neurosci, 24: 667-676 |
|
GSE133889 |
| Kronman, Hope et al. (2025) Multidimensional Effects of Stress on Neuronal Exosome Levels and Simultaneous Transcriptomic Profiles.; Biol Psychiatry Glob Open Sci, 5: 100401 |
|
GSE281861 |
| Krueger, James G et al. (2012) IL-17A is essential for cell activation and inflammatory gene circuits in subjects with psoriasis.; J Allergy Clin Immunol, 130: 145-54.e9 |
|
GSE31652 |
| Krueger, James G et al. (2015) A Randomized, Placebo-Controlled Study of SRT2104, a SIRT1 Activator, in Patients with Moderate to Severe Psoriasis.; PLoS One, 10: e0142081 |
|
GSE50614 |
| Krug, Brian et al. (2019) Pervasive H3K27 Acetylation Leads to ERV Expression and a Therapeutic Vulnerability in H3K27M Gliomas.; Cancer Cell, 35: 782-797.e8 |
|
GSE117446 |
| Krug, Tiago et al. (2012) TTC7B emerges as a novel risk factor for ischemic stroke through the convergence of several genome-wide approaches.; J Cereb Blood Flow Metab, [no vol.]: [no pages] |
|
GSE22255 |
| Kruglov, Oleg et al. (2023) Melanoma-associated repair-like Schwann cells suppress anti-tumor T-cells via 12/15-LOX/COX2-associated eicosanoid production.; Oncoimmunology, 12: 2192098 |
|
GSE208150 |
| Kruithof-de Julio, Marianna et al. (2011) Regulation of extra-embryonic endoderm stem cell differentiation by Nodal and Cripto signaling.; Development, 138: 3885-95 |
|
GSE23675 |
| Krukenberg, Kristin A et al. (2014) Basal activity of a PARP1-NuA4 complex varies dramatically across cancer cell lines.; Cell Rep, 8: 1808-1818 |
|
GSE56400 |
| Krus, Ulrika et al. (2014) The complement inhibitor CD59 regulates insulin secretion by modulating exocytotic events.; Cell Metab, 19: 883-90 |
|
GSE54279 |
| Kruse, Pia et al. (2024) Synaptopodin Regulates Denervation-Induced Plasticity at Hippocampal Mossy Fiber Synapses.; Cells, 13: [no pages] |
|
GSE216509.2 GSE216509.1 |
| Krutikov, Konstantin et al. (2014) Ectopic TLX1 expression accelerates malignancies in mice deficient in DNA-PK.; PLoS One, 9: e89649 |
|
GSE47421 |
| Krzisch, Marine et al. (2024) The A53T Mutation in α-Synuclein Enhances Proinflammatory Activation in Human Microglia Upon Inflammatory Stimulus.; Biol Psychiatry, [no vol.]: [no pages] |
|
GSE241437 |
| Ku, Jayoung et al. (2024) Alternative polyadenylation determines the functional landscape of inverted Alu repeats.; Mol Cell, 84: 1062-1077.e9 |
|
GSE232587 |
| Ku, Sheng Yu et al. (2017) Rb1 and Trp53 cooperate to suppress prostate cancer lineage plasticity, metastasis, and antiandrogen resistance.; Science, 355: 78-83 |
|
GSE90891 |
| Ku, Sheng-Yu et al. (2024) Notch signaling suppresses neuroendocrine differentiation and alters the immune microenvironment in advanced prostate cancer.; J Clin Invest, 134: [no pages] |
|
GSE234819 |
| Ku, Sherman et al. (2010) Friedreich's ataxia induced pluripotent stem cells model intergenerational GAA?TTC triplet repeat instability.; Cell Stem Cell, 7: 631-7 |
|
GSE22651 |
| Kuang, Zijian et al. (2026) PRSS22 inhibits HMOX1-mediated ferroptosis and induces osteopontin cleavage to promote M2 macrophage polarization and colitis-associated carcinogenesis.; Oncogene, 45: 1275-1286 |
|
GSE308833 |
| Kubiliute, Raimonda et al. (2021) Nongenotoxic ABCB1 activator tetraphenylphosphonium can contribute to doxorubicin resistance in MX-1 breast cancer cell line.; Sci Rep, 11: 6556 |
|
GSE163986 |
| Kubisch, Rebekka et al. (2013) A Comprehensive Gene Expression Analysis of Resistance Formation upon Metronomic Cyclophosphamide Therapy.; Transl Oncol, 6: 1-9 |
|
GSE42913 |
| Kubo, Hiroshi et al. (2009) Identification of mesenchymal stem cell (MSC)-transcription factors by microarray and knockdown analyses, and signature molecule-marked MSC in bone marrow by immunohistochemistry.; Genes Cells, 14: 407-24 |
|
GSE9451 |
| Kubo, Ken-Ichiro et al. (2017) Association of impaired neuronal migration with cognitive deficits in extremely preterm infants.; JCI Insight, 2: [no pages] |
|
GSE89998 |
| Kubo, Makoto et al. (2013) Inhibition of the proliferation of acquired aromatase inhibitor-resistant breast cancer cells by histone deacetylase inhibitor LBH589 (panobinostat).; Breast Cancer Res Treat, 137: 93-107 |
|
GSE36509 |
| Kubo, Naoki et al. (2021) Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation.; Nat Struct Mol Biol, [no vol.]: [no pages] |
|
GSE146454 |
| Kubo, Satoshi et al. (2022) Early B cell factor 4 modulates FAS-mediated apoptosis and promotes cytotoxic function in human immune cells.; Proc Natl Acad Sci U S A, 119: e2208522119 |
|
GSE206221 |
| Kubota, Azusa et al. (2025) Housing environment bilaterally alters transcriptomic profile in the rat hippocampal CA1 region.; PLoS One, 20: e0338190 |
|
GSE270831 |
| Kuburas, Adisa et al. (2021) PACAP Induces Light Aversion in Mice by an Inheritable Mechanism Independent of CGRP.; J Neurosci, 41: 4697-4715 |
|
GSE174551 |
| Kuchenbauer, Florian et al. (2011) Comprehensive analysis of mammalian miRNA* species and their role in myeloid cells.; Blood, 118: 3350-8 |
|
GSE29453 |
| Kuczma, Michal et al. (2009) Foxp3-deficient regulatory T cells do not revert into conventional effector CD4+ T cells but constitute a unique cell subset.; J Immunol, 183: 3731-41 |
|
GSE11775 |
| Kudo, Rei et al. (2024) Long-term breast cancer response to CDK4/6 inhibition defined by TP53-mediated geroconversion.; Cancer Cell, 42: 1919-1935.e9 |
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GSE272312 GSE248294 |
| Kueh, Andrew J et al. (2023) Stem cell plasticity, acetylation of H3K14, and de novo gene activation rely on KAT7.; Cell Rep, 42: 111980 |
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GSE220498 GSE215970 GSE220602 |
| Kueh, Hao Yuan et al. (2016) Asynchronous combinatorial action of four regulatory factors activates Bcl11b for T cell commitment.; Nat Immunol, 17: 956-65 |
|
GSE76606 |
| Kuehn, Hye Sun et al. (2024) Disease-associated AIOLOS variants lead to immune deficiency/dysregulation by haploinsufficiency and redefine AIOLOS functional domains.; J Clin Invest, 134: [no pages] |
|
GSE242931 |
| Kuehner, Janise N et al. (2021) 5-hydroxymethylcytosine is dynamically regulated during forebrain organoid development and aberrantly altered in Alzheimer's disease.; Cell Rep, 35: 109042 |
|
GSE151818 |
| Kuehner, Janise N et al. (2023) Social defeat stress induces genome-wide 5mC and 5hmC alterations in the mouse brain.; G3 (Bethesda), 13: [no pages] |
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GSE223300.3 GSE223300.2 GSE223300.1 |
| Kuehner, Stefanie et al. (2013) Characterization of formaldehyde's genotoxic mode of action by gene expression analysis in TK6 cells.; Arch Toxicol, [no vol.]: [no pages] |
|
GSE41296 |
| Kuerbitz, Jeffrey et al. (2018) Loss of Intercalated Cells (ITCs) in the Mouse Amygdala ofTshz1Mutants Correlates with Fear, Depression, and Social Interaction Phenotypes.; J Neurosci, 38: 1160-1177 |
|
GSE99164 |
| Kugathasan, Subra et al. (2008) Loci on 20q13 and 21q22 are associated with pediatric-onset inflammatory bowel disease.; Nat Genet, 40: 1211-5 |
|
GSE10616 |
| Kugler, Jamie E et al. (2013) High mobility group N proteins modulate the fidelity of the cellular transcriptional profile in a tissue- and variant-specific manner.; J Biol Chem, 288: 16690-703 |
|
GSE39062 |
| Kuhn, Alexandre et al. (2007) Mutant huntingtin's effects on striatal gene expression in mice recapitulate changes observed in human Huntington's disease brain and do not differ with mutant huntingtin length or wild-type huntingtin dosage.; Hum Mol Genet, 16: 1845-61 |
|
GSE7958 GSE10263 GSE9375 |
| Kuhn, Alexandre et al. (2011) Population-specific expression analysis (PSEA) reveals molecular changes in diseased brain.; Nat Methods, 8: 945-7 |
|
GSE19380 |
| Kuhn, Julia et al. (2021) Regulatory T-cells inhibit microglia-induced pain hypersensitivity in female mice.; Elife, 10: [no pages] |
|
GSE184799 GSE184800 |
| Kuhrt, Leonard D et al. (2023) Neurofibromin 1 mutations impair the function of human induced pluripotent stem cell-derived microglia.; Dis Model Mech, 16: [no pages] |
|
GSE203647 |
| Kuijper, Elsa C et al. (2022) Huntington Disease Gene Expression Signatures in Blood Compared to Brain of YAC128 Mice as Candidates for Monitoring of Pathology.; Mol Neurobiol, [no vol.]: [no pages] |
|
GSE169405 GSE170997 |
| Kuijper, Elsa C et al. (2024) Antisense oligonucleotide-mediated disruption of HTT caspase-6 cleavage site ameliorates the phenotype of YAC128 Huntington disease mice.; Neurobiol Dis, 190: 106368 |
|
GSE239312 |
| Kuiper, Rowan et al. (2020) Prognostic and predictive performance of R-ISS with SKY92 in older patients with multiple myeloma: the HOVON-87/NMSG-18 trial.; Blood Adv, 4: 6298-6309 |
|
GSE87900 |
| Kujuro, Yuki et al. (2010) Esophageal cancer-related gene 4 is a secreted inducer of cell senescence expressed by aged CNS precursor cells.; Proc Natl Acad Sci U S A, 107: 8259-64 |
|
GSE28093 |
| Kulhanek, Debra et al. (2022) Female and male C57BL/6J offspring exposed to maternal obesogenic diet develop altered hypothalamic energy metabolism in adulthood.; Am J Physiol Endocrinol Metab, 323: E448-E466 |
|
GSE200611 |
| Kulkarni, Ameya S et al. (2020) Metformin alters skeletal muscle transcriptome adaptations to resistance training in older adults.; Aging (Albany NY), 12: 19852-19866 |
|
GSE157585 |
| Kulkarni, Devesha H et al. (2024) Small Intestinal Goblet Cells Control Humoral Immune Responses and Mobilization During Enteric Infection.; bioRxiv, [no vol.]: [no pages] |
|
GSE269646 |
| Kulkarni, Madhura et al. (2018) RUNX1 and RUNX3 protect against YAP-mediated EMT, stem-ness and shorter survival outcomes in breast cancer.; Oncotarget, 9: 14175-14192 |
|
GSE60876 |
| Kulkoyluoglu-Cotul, Eylem et al. (2019) Combined Targeting of Estrogen Receptor Alpha and XPO1 Prevent Akt Activation, Remodel Metabolic Pathways and Induce Autophagy to Overcome Tamoxifen Resistance.; Cancers (Basel), 11: [no pages] |
|
GSE112883 |
| Kulohoma, Benard W et al. (2017) Peripheral blood RNA gene expression in children with pneumococcal meningitis: a prospective case-control study.; BMJ Paediatr Open, 1: e000092 |
|
GSE47172 |
| Kumagai, Ayako et al. (2014) Altered Actions of Memantine and NMDA-Induced Currents in a New Grid2-Deleted Mouse Line.; Genes (Basel), 5: 1095-114 |
|
GSE55314 |
| Kumamaru, Hiromi et al. (2018) Generation and post-injury integration of human spinal cord neural stem cells.; Nat Methods, 15: 723-731 |
|
GSE83107 |
| Kumar P, Pavan et al. (2014) Coordinated control of senescence by lncRNA and a novel T-box3 co-repressor complex.; Elife, 3: [no pages] |
|
GSE76572.1 GSE76572.2 |
| Kumar, Amit et al. (2023) 2-Deoxyglucose drives plasticity via an adaptive ER stress-ATF4 pathway and elicits stroke recovery and Alzheimer's resilience.; Neuron, 111: 2831-2846.e10 |
|
GSE217283 |
| Kumar, Anujith et al. (2012) Zic3 induces conversion of human fibroblasts to stable neural progenitor-like cells.; J Mol Cell Biol, 4: 252-5 |
|
GSE29770 |
| Kumar, Arun et al. (2024) Brain-muscle communication prevents muscle aging by maintaining daily physiology.; Science, 384: 563-572 |
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GSE225764 GSE195724 |
| Kumar, Ashish R et al. (2009) A role for MEIS1 in MLL-fusion gene leukemia.; Blood, 113: 1756-8 |
|
GSE14101 |
| Kumar, Ashutosh et al. (2016) Role of cytochrome c in α-synuclein radical formation: implications of α-synuclein in neuronal death in Maneb- and paraquat-induced model of Parkinson's disease.; Mol Neurodegener, 11: 70 |
|
GSE89562 |
| Kumar, Azad et al. (2013) Age-associated changes in gene expression in human brain and isolated neurons.; Neurobiol Aging, 34: 1199-209 |
|
GSE37205 |
| Kumar, Gaurav et al. (2016) H2S Regulates Hypobaric Hypoxia-Induced Early Glio-Vascular Dysfunction and Neuro-Pathophysiological Effects.; EBioMedicine, 6: 171-189 |
|
GSE66287 |
| Kumar, Ghantasala S Sameer et al. (2012) Gene Expression Profiling of Tuberculous Meningitis Co-infected with HIV.; J Proteomics Bioinform, 5: 235-244 |
|
GSE29507 |
| Kumar, Girish et al. (2011) The determination of stem cell fate by 3D scaffold structures through the control of cell shape.; Biomaterials, 32: 9188-96 |
|
GSE50743 |
| Kumar, Kathryn Prame et al. (2024) Stroke Alters the Function of Enteric Neurons to Impair Smooth Muscle Relaxation and Dysregulates Gut Transit.; J Am Heart Assoc, 13: e033279 |
|
GSE216968 |
| Kumar, Namit et al. (2016) A YY1-dependent increase in aerobic metabolism is indispensable for intestinal organogenesis.; Development, 143: 3711-3722 |
|
GSE85602 |
| Kumar, Nisha Hemandhar et al. (2024) Comprehensive transcriptome analysis reveals altered mRNA splicing and post-transcriptional changes in the aged mouse brain.; Nucleic Acids Res, 52: 2865-2885 |
|
GSE233835 GSE249499 |
| Kumar, Pavanish et al. (2022) Single-cell transcriptomics and surface epitope detection in human brain epileptic lesions identifies pro-inflammatory signaling.; Nat Neurosci, 25: 956-966 |
|
GSE201048 |
| Kumar, Prashant et al. (2012) Cooperativity of Rb, Brca1, and p53 in malignant breast cancer evolution.; PLoS Genet, 8: e1003027 |
|
GSE34479 |
| Kumar, Rajnish et al. (2024) RNA-Seq Analysis Unraveling Novel Genes and Pathways Influencing Corneal Wound Healing.; Invest Ophthalmol Vis Sci, 65: 13 |
|
GSE260476 |
| Kühn, Michael W M et al. (2016) Targeting Chromatin Regulators Inhibits Leukemogenic Gene Expression in NPM1 Mutant Leukemia.; Cancer Discov, 6: 1166-1181 |
|
GSE85107 |