Class MultipleBaselinesRequireSubsetException

java.lang.Object

java.lang.Throwable

java.lang.Exception

java.lang.RuntimeException

ubic.gemma.core.analysis.expression.diff.AnalysisException

ubic.gemma.core.analysis.expression.diff.MultipleBaselinesRequireSubsetException

All Implemented Interfaces:

Serializable

public class MultipleBaselinesRequireSubsetException
extends AnalysisException

Raised when a factor carries more than one explicitly marked baseline and the analysis was not configured with a subset factor.

More than one baseline on a factor is legitimate — a dataset holding two experiments has a reference level per experiment — but it means the factor cannot be analyzed as a single contrast: there is no one level the others are measured against. Such a design has to be split with a subset factor, and running it whole would silently pick whichever baseline came first in iteration order and report a result nobody could interpret.

Author:

phase 3 baseline handling

See Also:

• Serialized Form

Constructor Summary

Constructors

Constructor	Description
MultipleBaselinesRequireSubsetException(String message, DifferentialExpressionAnalysisConfig config)

Method Summary

Methods inherited from class AnalysisException

getConfig

Methods inherited from class Throwable

addSuppressed, fillInStackTrace, getCause, getLocalizedMessage, getMessage, getStackTrace, getSuppressed, initCause, printStackTrace, printStackTrace, printStackTrace, setStackTrace, toString

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

MultipleBaselinesRequireSubsetException

public MultipleBaselinesRequireSubsetException(String message,
 DifferentialExpressionAnalysisConfig config)