Class BatchEffectDetails.BatchEffectStatistics
- java.lang.Object
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- ubic.gemma.core.analysis.preprocess.batcheffects.BatchEffectDetails.BatchEffectStatistics
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- Enclosing class:
- BatchEffectDetails
public class BatchEffectDetails.BatchEffectStatistics extends Object
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description intgetComponent()A PCA component that is explained by the batch factor.doublegetComponentVarianceProportion()The variance explained by the component.doublegetPvalue()A P-value statistic for that component.
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Method Detail
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getComponent
public int getComponent()
A PCA component that is explained by the batch factor. It is 1-based.
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getComponentVarianceProportion
public double getComponentVarianceProportion()
The variance explained by the component.
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getPvalue
public double getPvalue()
A P-value statistic for that component.
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