Class BatchEffectDetails


  • public class BatchEffectDetails
    extends Object
    provide some basic information about the properties and strength of a batch effect, if any.
    Author:
    Paul
    • Method Detail

      • getDataWasBatchCorrected

        public boolean getDataWasBatchCorrected()
      • getHasSingletonBatches

        public boolean getHasSingletonBatches()
      • getHasUninformativeBatchInformation

        public boolean getHasUninformativeBatchInformation()
      • hasBatchInformation

        public boolean hasBatchInformation()
      • hasProblematicBatchInformation

        public boolean hasProblematicBatchInformation()
      • isSingleBatch

        public boolean isSingleBatch()
        Returns:
        true if the experiment was determined to have just one batch, or false for any other state (including we don't know)
      • setBatchEffectStatistics

        public void setBatchEffectStatistics​(double pVal,
                                             int i,
                                             double variance)