Uses of Class
ubic.gemma.core.analysis.preprocess.svd.SVDException

Packages that use SVDException

Package	Description
ubic.gemma.apps	This package contains built-in Gemma CLI applications.
ubic.gemma.core.analysis.preprocess	This package contains classes for preprocessing expression data.
ubic.gemma.core.analysis.preprocess.svd
ubic.gemma.core.tasks.analysis.expression

Uses of SVDException in ubic.gemma.apps

Methods in ubic.gemma.apps that throw SVDException

Modifier and Type	Method	Description
protected void	SVDCli.processExpressionExperiment(ExpressionExperiment ee)

Uses of SVDException in ubic.gemma.core.analysis.preprocess

Methods in ubic.gemma.core.analysis.preprocess that return SVDException

Modifier and Type	Method	Description
SVDException	SVDRelatedPreprocessingException.getCause()

Constructors in ubic.gemma.core.analysis.preprocess with parameters of type SVDException

Modifier	Constructor	Description
	SVDRelatedPreprocessingException(ExpressionExperiment ee, SVDException cause)

Uses of SVDException in ubic.gemma.core.analysis.preprocess.svd

Methods in ubic.gemma.core.analysis.preprocess.svd that throw SVDException

Modifier and Type	Method	Description
SVDResult	SVDService.svd(ExpressionExperiment ee)	Compute and update the SVD analysis fo the given experiment.
SVDResult	SVDServiceImpl.svd(ExpressionExperiment ee)

Constructors in ubic.gemma.core.analysis.preprocess.svd that throw SVDException

Modifier	Constructor	Description
	ExpressionDataSVD(ExpressionDataDoubleMatrix expressionData)	Does normalization.
	ExpressionDataSVD(ExpressionDataDoubleMatrix expressionData, boolean normalizeMatrix)

Uses of SVDException in ubic.gemma.core.tasks.analysis.expression

Methods in ubic.gemma.core.tasks.analysis.expression that throw SVDException

Modifier and Type	Method	Description
TaskResult	SvdTaskImpl.call()