Class BlatResult2Psl
- java.lang.Object
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- ubic.gemma.core.analysis.sequence.BlatResult2Psl
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public class BlatResult2Psl extends Object
Used to convert BlatResult objects into PSL lines that can be displayed in the UCSC Genome Browser.- Author:
- pavlidis
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Constructor Summary
Constructors Constructor Description BlatResult2Psl()
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static String
blatResult2PslTrack(BlatResult blatResult)
Creates text that can be displayed directly as a track in UCSC, using their hgTracks program.
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Method Detail
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blatResult2PslTrack
public static String blatResult2PslTrack(BlatResult blatResult)
Creates text that can be displayed directly as a track in UCSC, using their hgTracks program. golden path custom track help.- Parameters:
blatResult
- blat result- Returns:
- psl track
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