Uses of Interface
ubic.gemma.core.analysis.sequence.Blat

Packages that use Blat

Package	Description
ubic.gemma.core.analysis.sequence
ubic.gemma.core.loader.expression.arrayDesign

Uses of Blat in ubic.gemma.core.analysis.sequence

Classes in ubic.gemma.core.analysis.sequence that implement Blat

Modifier and Type	Class	Description
class	ShellDelegatingBlat	Class to manage the gfServer and run BLAT searches.

Uses of Blat in ubic.gemma.core.loader.expression.arrayDesign

Methods in ubic.gemma.core.loader.expression.arrayDesign with parameters of type Blat

Modifier and Type	Method	Description
Collection<BlatResult>	ArrayDesignSequenceAlignmentService.processArrayDesign(ArrayDesign ad, Blat blat)
Collection<BlatResult>	ArrayDesignSequenceAlignmentServiceImpl.processArrayDesign(ArrayDesign design, Blat blat)