Package ubic.gemma.core.analysis.service

Class CompositeSequenceGeneMapperService

java.lang.Object

ubic.gemma.core.analysis.service.CompositeSequenceGeneMapperService

@Component
public class CompositeSequenceGeneMapperService
extends Object

Author:

keshav

Constructor Summary

Constructors

Constructor	Description
CompositeSequenceGeneMapperService()

Method Summary

Modifier and Type	Method	Description
LinkedHashMap<Gene,Collection<CompositeSequence>>	getGene2ProbeMapByOfficialSymbols(Collection<String> officialSymbols, Collection<ArrayDesign> arrayDesigns)
void	setGeneService(GeneService geneService)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CompositeSequenceGeneMapperService

public CompositeSequenceGeneMapperService()

Method Detail

getGene2ProbeMapByOfficialSymbols

public LinkedHashMap<Gene,Collection<CompositeSequence>> getGene2ProbeMapByOfficialSymbols(Collection<String> officialSymbols,
                                                                                                 Collection<ArrayDesign> arrayDesigns)

Parameters:

arrayDesigns - to look in

officialSymbols - official symbols

Returns:

map of gene to composite sequences

setGeneService

public void setGeneService(GeneService geneService)

Parameters:

geneService - The geneService to set.