Package ubic.gemma.core.analysis.service
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Interface Summary Interface Description ArrayDesignAnnotationService Methods to generate annotations for array designs, based on information already in the database.ExpressionAnalysisResultSetFileService ExpressionDataFileService ExpressionDataMatrixService Tools for easily getting data matrices for analysis in a consistent way.FileService<T> Interface for a service that serialize entities.GeneMultifunctionalityPopulationService Populate/update the gene multifunctionality information in the system.JsonFileService<T> Interface for service that provides JSON serialization.OutlierFlaggingService TsvFileService<T> Interface for services that produce TSV serialization. -
Class Summary Class Description AbstractFileService<T> Provide base implementation for all sorts of file services that serialize data in tabular format.ArrayDesignAnnotationServiceImpl CompositeSequenceGeneMapperService ExpressionAnalysisResultSetFileServiceImpl ExpressionDataFileServiceImpl Supports the creation and location of 'flat file' versions of data in the system, for download by users.ExpressionDataMatrixServiceImpl Tools for easily getting data matrices for analysis in a consistent way.ExpressionExperimentVectorManipulatingService GeneMultifunctionalityPopulationServiceImpl Compute gene multifunctionality and store it in the database.OutlierFlaggingServiceImpl Service for removing sample(s) from an expression experiment. -
Enum Summary Enum Description ArrayDesignAnnotationService.OutputType