Package ubic.gemma.core.analysis.service
Interface ExpressionAnalysisResultSetFileService
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- All Known Implementing Classes:
ExpressionAnalysisResultSetFileServiceImpl
public interface ExpressionAnalysisResultSetFileService
- Author:
- poirigui
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description void
writeTsv(ExpressionAnalysisResultSet analysisResultSet, Baseline baseline, Map<Long,Set<Gene>> result2Genes, Writer writer)
Write the analysis result set with result-to-gene mappings.
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Method Detail
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writeTsv
void writeTsv(ExpressionAnalysisResultSet analysisResultSet, @Nullable Baseline baseline, Map<Long,Set<Gene>> result2Genes, Writer writer) throws IOException
Write the analysis result set with result-to-gene mappings.The tabular format has the following additional columns: - gene id - gene name - gene NCBI ID - gene official symbol - gene official name
- Parameters:
baseline
- baseline to include in the TSV headerresult2Genes
- mapping of results to genes- Throws:
IOException
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