Package ubic.gemma.core.analysis.service

Interface ExpressionAnalysisResultSetFileService

All Known Implementing Classes:

ExpressionAnalysisResultSetFileServiceImpl

public interface ExpressionAnalysisResultSetFileService

Author:

poirigui

Method Summary

Modifier and Type	Method	Description
void	writeTsv(ExpressionAnalysisResultSet analysisResultSet, Baseline baseline, Map<Long,Set<Gene>> result2Genes, Writer writer)	Write the analysis result set with result-to-gene mappings.

Method Details

writeTsv

void writeTsv(ExpressionAnalysisResultSet analysisResultSet,
 @Nullable
 Baseline baseline,
 Map<Long,Set<Gene>> result2Genes,
 Writer writer)
       throws IOException

Write the analysis result set with result-to-gene mappings.

The tabular format has the following additional columns: - gene id - gene name - gene NCBI ID - gene official symbol - gene official name

Parameters:

baseline - baseline to include in the TSV header

result2Genes - mapping of results to genes

Throws:

IOException