Package ubic.gemma.core.analysis.service

Interface ExpressionAnalysisResultSetFileService

All Superinterfaces:

FileService<ExpressionAnalysisResultSet>, TsvFileService<ExpressionAnalysisResultSet>

All Known Implementing Classes:

ExpressionAnalysisResultSetFileServiceImpl

public interface ExpressionAnalysisResultSetFileService
extends TsvFileService<ExpressionAnalysisResultSet>

Author:

poirigui

Method Summary

Modifier and Type	Method	Description
void	writeTsvToAppendable(ExpressionAnalysisResultSet analysisResultSet, Map<Long,List<Gene>> result2Genes, Writer writer)	Write the analysis result set to an Appendable using a tabular format.

Methods inherited from interface ubic.gemma.core.analysis.service.FileService

write, write

Methods inherited from interface ubic.gemma.core.analysis.service.TsvFileService

writeTsv, writeTsv

Method Detail

writeTsvToAppendable

void writeTsvToAppendable(ExpressionAnalysisResultSet analysisResultSet,
                          Map<Long,List<Gene>> result2Genes,
                          Writer writer)
                   throws IOException

Write the analysis result set to an Appendable using a tabular format. The format is borrowed from ExpressionDataFileService and contains the following columns: - result id - probe id - probe name - biological sequence name - pvalue - corrected pvalue (a.k.a. qvalue) - rank

Throws:

IOException