Class OutlierFlaggingAuditServiceImpl

java.lang.Object

ubic.gemma.core.analysis.service.OutlierFlaggingAuditServiceImpl

All Implemented Interfaces:

OutlierFlaggingAuditService

@Service
public class OutlierFlaggingAuditServiceImpl
extends Object
implements OutlierFlaggingAuditService

Implementation of OutlierFlaggingAuditService. The Audited aspect intercepts each method on return, picks up the SampleRemovalPayload argument, serialises it to JSON and writes it to AUDIT_EVENT.PAYLOAD via addUpdateEventWithPayload. The note parameter is forwarded into the AUDIT_EVENT.NOTE column via messageSpel = "#note".

Propagation.REQUIRES_NEW is used because the calling OutlierFlaggingServiceImpl methods run with Propagation.NEVER; the audit row needs its own short-lived transaction.

Phase C bucket 2f — see AUDIT_PHASE_C_RECCE.md §4d. Replaces the legacy imperative auditTrailService.addUpdateEvent(ee, SampleRemovalEvent.class, note, detail) 4-arg calls in OutlierFlaggingServiceImpl#markAsMissing and OutlierFlaggingServiceImpl#unmarkAsMissing.

Constructor Summary

Constructors

Constructor	Description
OutlierFlaggingAuditServiceImpl()

Method Summary

Modifier and Type	Method	Description
void	recordSampleRemoval(ExpressionExperiment ee, String note, SampleRemovalPayload payload)	Emit a SampleRemovalEvent for ee with the given payload.
void	recordSampleRemovalReversion(ExpressionExperiment ee, String note, SampleRemovalPayload payload)	Emit a SampleRemovalReversionEvent for ee with the given payload.

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

OutlierFlaggingAuditServiceImpl

public OutlierFlaggingAuditServiceImpl()

Method Details

recordSampleRemoval

@Transactional(propagation=REQUIRES_NEW)
@Audited(value=SampleRemovalEvent.class,
         messageSpel="#note")
public void recordSampleRemoval(ExpressionExperiment ee,
 String note,
 SampleRemovalPayload payload)

Description copied from interface: OutlierFlaggingAuditService

Emit a SampleRemovalEvent for ee with the given payload.

Specified by:

recordSampleRemoval in interface OutlierFlaggingAuditService

recordSampleRemovalReversion

@Transactional(propagation=REQUIRES_NEW)
@Audited(value=SampleRemovalReversionEvent.class,
         messageSpel="#note")
public void recordSampleRemovalReversion(ExpressionExperiment ee,
 String note,
 SampleRemovalPayload payload)

Description copied from interface: OutlierFlaggingAuditService

Emit a SampleRemovalReversionEvent for ee with the given payload.

Specified by:

recordSampleRemovalReversion in interface OutlierFlaggingAuditService