Package ubic.gemma.core.analysis.singleCell.aggregate

Class SingleCellExperimentSubSetsCreationConfig

java.lang.Object

ubic.gemma.core.analysis.singleCell.aggregate.SingleCellExperimentSubSetsCreationConfig

public class SingleCellExperimentSubSetsCreationConfig
extends Object

Configuration for subsetting single-cell expression data in pseudo-bulks.

Author:

poirigui

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	SingleCellExperimentSubSetsCreationConfig.SingleCellExperimentSubSetsCreationConfigBuilder

Method Summary

Modifier and Type	Method	Description
static SingleCellExperimentSubSetsCreationConfig.SingleCellExperimentSubSetsCreationConfigBuilder	builder()
boolean	isIgnoreUnmatchedCharacteristics()	Whether to allow unmapped characteristics.
boolean	isIgnoreUnmatchedFactorValues()	Whether to allow unmapped factor values.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

builder

public static SingleCellExperimentSubSetsCreationConfig.SingleCellExperimentSubSetsCreationConfigBuilder builder()

isIgnoreUnmatchedCharacteristics

public boolean isIgnoreUnmatchedCharacteristics()

Whether to allow unmapped characteristics.

isIgnoreUnmatchedFactorValues

public boolean isIgnoreUnmatchedFactorValues()

Whether to allow unmapped factor values.