Uses of Class
ubic.gemma.core.loader.expression.cellxgene.model.DatasetMetadata
Packages that use DatasetMetadata
Package
Description
This package contains classes for loading expression data from CELLxGENE.
This package contains specific logic for dealing with single-cell data from GEO.
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Uses of DatasetMetadata in ubic.gemma.core.loader.expression.cellxgene
Methods in ubic.gemma.core.loader.expression.cellxgene that return DatasetMetadataModifier and TypeMethodDescriptionCellXGeneFetcher.fetchDatasetMetadata(String datasetId) Retrieves the metadata for a specific CELLxGENE dataset.Methods in ubic.gemma.core.loader.expression.cellxgene that return types with arguments of type DatasetMetadataModifier and TypeMethodDescriptionCellXGeneFetcher.fetchAllDatasetMetadata()Fetch the metadata for all CELLxGENE datasets.Methods in ubic.gemma.core.loader.expression.cellxgene with parameters of type DatasetMetadataModifier and TypeMethodDescriptionCellXGeneConverter.convert(CollectionMetadata collectionMetadata, DatasetMetadata datasetMetadata, ArrayDesign platform, Collection<CompositeSequence> compositeSequences, String datasetShortName, SingleCellDataLoader dataLoader, boolean loadSingleCellData) -
Uses of DatasetMetadata in ubic.gemma.core.loader.expression.cellxgene.model
Methods in ubic.gemma.core.loader.expression.cellxgene.model that return types with arguments of type DatasetMetadataMethod parameters in ubic.gemma.core.loader.expression.cellxgene.model with type arguments of type DatasetMetadataModifier and TypeMethodDescriptionvoidCollectionMetadata.setDatasets(List<DatasetMetadata> datasets) -
Uses of DatasetMetadata in ubic.gemma.core.loader.expression.geo.singleCell
Methods in ubic.gemma.core.loader.expression.geo.singleCell that return DatasetMetadataModifier and TypeMethodDescriptionGeoSingleCellDetector.getDatasetMetadataFromCellXGene(GeoSeries geoSeries) GeoSingleCellDetector.getDatasetMetadataFromCellXGene(GeoSeries geoSeries, String collectionId) GeoSingleCellDetector.getDatasetMetadataFromCellXGene(GeoSeries geoSeries, String collectionId, String datasetId) Methods in ubic.gemma.core.loader.expression.geo.singleCell that return types with arguments of type DatasetMetadataModifier and TypeMethodDescriptionGeoSingleCellDetector.getAllDatasetMetadataFromCellXGene(GeoSeries geoSeries) GeoSingleCellDetector.getAllDatasetMetadataFromCellXGene(GeoSeries geoSeries, String collectionId)