Class GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder

java.lang.Object

ubic.gemma.core.loader.expression.geo.service.GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder

Enclosing class:

GeoService.GeoUpdateConfig

public static class GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder
extends Object

Author:

paul

Method Summary

Modifier and Type	Method	Description
GeoService.GeoUpdateConfig	build()
GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder	experimentTags(boolean experimentTags)
GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder	publications(boolean publications)
GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder	sampleCharacteristics(boolean sampleCharacteristics)
GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder	sourceMetadata(boolean sourceMetadata)	Rebuild Investigation.sourceMetadata from the series this refetch parsed.
String	toString()

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Method Details

experimentTags

public GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder experimentTags(boolean experimentTags)

Returns:

this.

sampleCharacteristics

public GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder sampleCharacteristics(boolean sampleCharacteristics)

Returns:

this.

publications

public GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder publications(boolean publications)

Returns:

this.

sourceMetadata

public GeoService.GeoUpdateConfig.GeoUpdateConfigBuilder sourceMetadata(boolean sourceMetadata)

Rebuild Investigation.sourceMetadata from the series this refetch parsed.

Separate from the three above because it is the only one that writes nothing of GEO's opinion into Gemma's own curated fields: the document is a record of what GEO said, stored beside the experiment rather than merged into it. That is what makes it safe to run over the whole corpus, and why the backfill CLI sets this flag and none of the others.

Returns:

this.

build

public GeoService.GeoUpdateConfig build()

toString

public String toString()

Overrides:

toString in class Object