Uses of Package
ubic.gemma.core.loader.expression.singleCell

Packages that use ubic.gemma.core.loader.expression.singleCell

Package	Description
ubic.gemma.core.loader.expression.geo.singleCell	This package contains specific logic for dealing with single-cell data from GEO.
ubic.gemma.core.loader.expression.singleCell	This package contains classes for loading single cell expression data.
ubic.gemma.core.loader.expression.singleCell.metadata	This package contains classes for loading single-cell metadata such as cell type assignment and cell-level characteristics.
ubic.gemma.core.loader.expression.singleCell.transform	This package contains classes for transforming single cell expression data.

Classes in ubic.gemma.core.loader.expression.singleCell used by ubic.gemma.core.loader.expression.geo.singleCell

Class	Description
SingleCellDataLoader	Common interface for all single cell data loaders.
SingleCellDataLoaderConfig	Basic configuration for loading single-cell data.
SingleCellDataType	Supported single-cell data types.

Classes in ubic.gemma.core.loader.expression.singleCell used by ubic.gemma.core.loader.expression.singleCell

Class	Description
AbstractAnnDataSingleCellDataLoaderConfigurer	Base class for AnnDataSingleCellDataLoader configurers.
AbstractDelegatingSingleCellDataLoader
AbstractMexSingleCellDataLoaderConfigurer
AnnDataSingleCellDataLoader	Reads single-cell vectors from the AnnData on-disk HDF5 format.
MexSingleCellDataLoader	Load single cell data from 10X Genomics MEX format.
NullSingleCellDataLoader	Single-cell data loader used when no data is available.
SequencingMetadataFileSingleCellDataLoader	Adapt a SequencingMetadataFileDataLoader so that it can be used as a SingleCellDataLoader.
SingleCellDataLoader	Common interface for all single cell data loaders.
SingleCellDataLoaderConfig	Basic configuration for loading single-cell data.
SingleCellDataLoaderConfigurer	Interface for configuring a single-cell data loader.
SingleCellDataLoaderService	High-level service for loading single-cell data.
SingleCellDataType	Supported single-cell data types.

Classes in ubic.gemma.core.loader.expression.singleCell used by ubic.gemma.core.loader.expression.singleCell.metadata

Class	Description
AbstractDelegatingSingleCellDataLoader
SingleCellDataLoader	Common interface for all single cell data loaders.

Classes in ubic.gemma.core.loader.expression.singleCell used by ubic.gemma.core.loader.expression.singleCell.transform

Class	Description
SingleCellDataType	Supported single-cell data types.