Uses of Interface
ubic.gemma.core.loader.util.anndata.Dataframe.Column

Packages that use Dataframe.Column

Package	Description
ubic.gemma.core.loader.expression.singleCell	This package contains classes for loading single cell expression data.
ubic.gemma.core.loader.util.anndata

Uses of Dataframe.Column in ubic.gemma.core.loader.expression.singleCell

Methods in ubic.gemma.core.loader.expression.singleCell with parameters of type Dataframe.Column

Modifier and Type	Method	Description
protected String	AbstractAnnDataSingleCellDataLoaderConfigurer.getUnknownCellTypeIndicator(Dataframe.Column<?,String> column)	Extract the unknown cell type indicator from a set of values.
protected boolean	AbstractAnnDataSingleCellDataLoaderConfigurer.isCellIdColumn(Dataframe.Column<?,String> column)	Check if the given dataframe column contains cell identifiers.
protected boolean	AbstractAnnDataSingleCellDataLoaderConfigurer.isCellTypeColumn(Dataframe.Column<?,String> column)	Check if a given column contains cell types.
protected boolean	AbstractAnnDataSingleCellDataLoaderConfigurer.isGeneColumn(Dataframe.Column<?,String> column)	Check if a given column contains gene identifiers.
protected boolean	AbstractAnnDataSingleCellDataLoaderConfigurer.isSampleNameColumn(Dataframe.Column<?,String> column)	Check if a given dataframe column contains sample names.
protected boolean	AnnDataSingleCellDataLoaderConfigurer.isSampleNameColumn(Dataframe.Column<?,String> column)

Uses of Dataframe.Column in ubic.gemma.core.loader.util.anndata

Methods in ubic.gemma.core.loader.util.anndata that return Dataframe.Column

Modifier and Type	Method	Description
Dataframe.Column<K,?>	Dataframe.getColumn(String columnName)	Obtain a column, the element type is guessed as per Dataframe.getColumnType(String)
<T> Dataframe.Column<K,T>	Dataframe.getColumn(String columnName, Class<T> clazz)	Obtain a column of the given element type.
Dataframe.Column<K,K>	Dataframe.getIndex()	Obtain the index column.
<T> Dataframe.Column<T,T>	Dataframe.getIndex(Class<T> indexClass)	Obtain the index column.

Methods in ubic.gemma.core.loader.util.anndata that return types with arguments of type Dataframe.Column

Modifier and Type	Method	Description
Iterator<Dataframe.Column<K,?>>	Dataframe.iterator()