Uses of Interface
ubic.gemma.core.loader.util.anndata.Dataframe.Column

Packages that use Dataframe.Column

Package	Description
ubic.gemma.core.loader.expression.singleCell	This package contains classes for loading single-cell expression data.
ubic.gemma.core.loader.util.anndata

Uses of Dataframe.Column in ubic.gemma.core.loader.expression.singleCell

Methods in ubic.gemma.core.loader.expression.singleCell with parameters of type Dataframe.Column

Modifier and Type	Method	Description
protected String	AbstractAnnDataSingleCellDataLoaderConfigurer.getUnknownCellTypeIndicator(Dataframe.Column<?,String> column)	Extract the unknown cell type indicator from a set of values.
protected boolean	AbstractAnnDataSingleCellDataLoaderConfigurer.isCellIdColumn(Dataframe.Column<?,String> column)	Check if the given dataframe column contains cell identifiers.
protected boolean	AbstractAnnDataSingleCellDataLoaderConfigurer.isCellTypeColumn(Dataframe.Column<?,String> column)	Check if a given column contains cell types.
protected boolean	AbstractAnnDataSingleCellDataLoaderConfigurer.isGeneColumn(Dataframe.Column<?,String> column)	Check if a given column contains gene identifiers.
protected boolean	AbstractAnnDataSingleCellDataLoaderConfigurer.isSampleNameColumn(Dataframe.Column<?,String> column)	Check if a given dataframe column contains sample names.
protected boolean	AnnDataSingleCellDataLoaderConfigurer.isSampleNameColumn(Dataframe.Column<?,String> column)

Uses of Dataframe.Column in ubic.gemma.core.loader.util.anndata

Methods in ubic.gemma.core.loader.util.anndata that return Dataframe.Column

Modifier and Type	Method	Description
Dataframe.Column<K,?>	Dataframe.getColumn(String columnName)	Obtain a column, the element type is guessed as per Dataframe.getColumnType(String)
<T> Dataframe.Column<K,T>	Dataframe.getColumn(String columnName, Class<T> clazz)	Obtain a column of the given element type.
Dataframe.Column<K,K>	Dataframe.getIndex()	Obtain the index column.
<T> Dataframe.Column<T,T>	Dataframe.getIndex(Class<T> indexClass)	Obtain the index column.

Methods in ubic.gemma.core.loader.util.anndata that return types with arguments of type Dataframe.Column

Modifier and Type	Method	Description
Iterator<Dataframe.Column<K,?>>	Dataframe.iterator()