Package ubic.gemma.core.loader.util.hdf5

Class H5File

java.lang.Object

ubic.gemma.core.loader.util.hdf5.H5Location

ubic.gemma.core.loader.util.hdf5.H5File

All Implemented Interfaces:

Closeable, AutoCloseable

public class H5File
extends H5Location
implements Closeable

Method Summary

Modifier and Type	Method	Description
void	close()
Path	getPath()
static H5File	open(Path path)	Open an HDF5 file.

Methods inherited from class ubic.gemma.core.loader.util.hdf5.H5Location

exists, getAttribute, getAttribute, getAttributes, getAttributes, getChildren, getChildren, getDataset, getGroup, getStringAttribute, getStringAttribute, hasAttribute, hasAttribute, isGroup

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

open

public static H5File open(Path path)
                   throws IOException

Open an HDF5 file.

Throws:

FileNotFoundException - if the file does not exist

TruncatedH5FileException - if the file is truncated

IOException - for any other file-related errors

getPath

public Path getPath()

close

public void close()
           throws IOException

Specified by:

close in interface AutoCloseable

Specified by:

close in interface Closeable

Throws:

IOException