Uses of Class
ubic.gemma.core.loader.util.hdf5.H5Dataset

Packages that use H5Dataset

Package	Description
ubic.gemma.core.loader.util.anndata
ubic.gemma.core.loader.util.hdf5	Minimalistic read-only wrapper around HDF5 native library.

Uses of H5Dataset in ubic.gemma.core.loader.util.anndata

Fields in ubic.gemma.core.loader.util.anndata declared as H5Dataset

Modifier and Type	Field	Description
protected H5Dataset	NullableArray.mask
protected H5Dataset	NullableArray.values

Methods in ubic.gemma.core.loader.util.anndata that return H5Dataset

Modifier and Type	Method	Description
H5Dataset	Dataframe.getArrayColumn(String columnName)	Obtain an array column as a H5 dataset.
H5Dataset	DenseMatrix.getData()
H5Dataset	Matrix.getData()	Obtain the H5 dataset underlying this matrix.
H5Dataset	SparseMatrix.getData()
H5Dataset	SparseMatrix.getIndices()

Constructors in ubic.gemma.core.loader.util.anndata with parameters of type H5Dataset

Constructor	Description
DenseMatrix(H5Dataset dataset)

Uses of H5Dataset in ubic.gemma.core.loader.util.hdf5

Methods in ubic.gemma.core.loader.util.hdf5 that return H5Dataset

Modifier and Type	Method	Description
H5Dataset	H5Location.getDataset(String path)