Class GeeqValueObject

java.lang.Object
ubic.gemma.model.common.IdentifiableValueObject<Geeq>
ubic.gemma.model.expression.experiment.GeeqValueObject
All Implemented Interfaces:
Serializable, Identifiable
Direct Known Subclasses:
GeeqAdminValueObject
public class GeeqValueObject extends IdentifiableValueObject<Geeq>
Represents publicly available geeq information
Author:
paul, tesarst
See Also:

  • Constructor Details

    • GeeqValueObject

      public GeeqValueObject()
      Required when using the class as a spring bean

    • GeeqValueObject

      public GeeqValueObject(Geeq g)

  • Method Details

    • getPublicQualityScore

      public double getPublicQualityScore()

    • getqScoreOutliers

      public double getqScoreOutliers()

    • getqScoreSampleMeanCorrelation

      public double getqScoreSampleMeanCorrelation()

    • getqScoreSampleMedianCorrelation

      public double getqScoreSampleMedianCorrelation()

    • getqScoreSampleCorrelationVariance

      public double getqScoreSampleCorrelationVariance()

    • getqScorePlatformsTech

      public double getqScorePlatformsTech()

    • getqScoreReplicates

      public double getqScoreReplicates()

    • getqScoreBatchInfo

      public double getqScoreBatchInfo()

    • getqScorePublicBatchEffect

      public double getqScorePublicBatchEffect()

    • getqScorePublicBatchConfound

      public double getqScorePublicBatchConfound()

    • isNoVectors

      public boolean isNoVectors()

    • getCorrMatIssues

      public byte getCorrMatIssues()

    • getReplicatesIssues

      public byte getReplicatesIssues()

    • isBatchCorrected

      public boolean isBatchCorrected()

    • getLastComputed

      @Nullable public Date getLastComputed()

    • setPublicQualityScore

      public void setPublicQualityScore(double publicQualityScore)

    • setQScoreOutliers

      public void setQScoreOutliers(double qScoreOutliers)

    • setQScoreSampleMeanCorrelation

      public void setQScoreSampleMeanCorrelation(double qScoreSampleMeanCorrelation)

    • setQScoreSampleMedianCorrelation

      public void setQScoreSampleMedianCorrelation(double qScoreSampleMedianCorrelation)

    • setQScoreSampleCorrelationVariance

      public void setQScoreSampleCorrelationVariance(double qScoreSampleCorrelationVariance)

    • setQScorePlatformsTech

      public void setQScorePlatformsTech(double qScorePlatformsTech)

    • setQScoreReplicates

      public void setQScoreReplicates(double qScoreReplicates)

    • setQScoreBatchInfo

      public void setQScoreBatchInfo(double qScoreBatchInfo)

    • setQScorePublicBatchEffect

      public void setQScorePublicBatchEffect(double qScorePublicBatchEffect)

    • setQScorePublicBatchConfound

      public void setQScorePublicBatchConfound(double qScorePublicBatchConfound)

    • setNoVectors

      public void setNoVectors(boolean noVectors)

    • setCorrMatIssues

      public void setCorrMatIssues(byte corrMatIssues)

    • setReplicatesIssues

      public void setReplicatesIssues(byte replicatesIssues)

    • setBatchCorrected

      public void setBatchCorrected(boolean batchCorrected)

    • setLastComputed

      public void setLastComputed(@Nullable Date lastComputed)
      Timestamp of the last GeeqEvent for the experiment, populated by callers that have access to the audit log. null when unknown or never recorded.

    • toString

      public String toString()
      Overrides:
      toString in class IdentifiableValueObject<Geeq>