Uses of Class
ubic.gemma.model.expression.experiment.GeeqValueObject

Packages that use GeeqValueObject

Package	Description
ubic.gemma.model.expression.experiment
ubic.gemma.persistence.service.expression.experiment
ubic.gemma.rest

Uses of GeeqValueObject in ubic.gemma.model.expression.experiment

Subclasses of GeeqValueObject in ubic.gemma.model.expression.experiment

Modifier and Type	Class	Description
class	GeeqAdminValueObject	Represents administrative geeq information.

Methods in ubic.gemma.model.expression.experiment that return GeeqValueObject

Modifier and Type	Method	Description
GeeqValueObject	ExpressionExperimentValueObject.getGeeq()

Methods in ubic.gemma.model.expression.experiment with parameters of type GeeqValueObject

Modifier and Type	Method	Description
void	ExpressionExperimentValueObject.setGeeq(GeeqValueObject geeq)

Uses of GeeqValueObject in ubic.gemma.persistence.service.expression.experiment

Subclasses with type arguments of type GeeqValueObject in ubic.gemma.persistence.service.expression.experiment

Modifier and Type	Class	Description
class	GeeqDaoImpl
class	GeeqServiceImpl

Subinterfaces with type arguments of type GeeqValueObject in ubic.gemma.persistence.service.expression.experiment

Modifier and Type	Interface	Description
interface	GeeqDao
interface	GeeqService

Methods in ubic.gemma.persistence.service.expression.experiment that return GeeqValueObject

Modifier and Type	Method	Description
protected GeeqValueObject	GeeqDaoImpl.doLoadValueObject(Geeq entity)

Uses of GeeqValueObject in ubic.gemma.rest

Methods in ubic.gemma.rest that return GeeqValueObject

Modifier and Type	Method	Description
GeeqValueObject	PipelineStatusValueObject.getGeeq()

Methods in ubic.gemma.rest that return types with arguments of type GeeqValueObject

Modifier and Type	Method	Description
ResponseDataObject<GeeqValueObject>	DatasetsWebService.getDatasetGeeq(DatasetArg<?> datasetArg)
ResponseDataObject<GeeqValueObject>	DatasetsWebService.getDatasetGeeqPublic(DatasetArg<?> datasetArg)	Public sibling of DatasetsWebService.getDatasetGeeq(DatasetArg): returns the per-factor GEEQ breakdown without exposing the admin-only detected/manual override scores or the free-text otherIssues curator field, which live on GeeqAdminValueObject.
ResponseDataObject<GeeqValueObject>	DatasetsWebService.recomputeDatasetGeeq(DatasetArg<?> datasetArg, GeeqService.ScoreMode mode)
ResponseDataObject<GeeqValueObject>	DatasetsWebService.recomputeDatasetGeeqViaPost(DatasetArg<?> datasetArg, DatasetsWebService.GeeqRecomputeRequest body)	Alias for DatasetsWebService.recomputeDatasetGeeq(DatasetArg, GeeqService.ScoreMode) that exposes the GEEQ recompute under POST /datasets/{id}/geeq/recompute with a JSON body.
ResponseDataObject<GeeqValueObject>	DatasetsWebService.recomputeDatasetGeeqViaPostAlias(DatasetArg<?> datasetArg, DatasetsWebService.GeeqRecomputeRequest body)	Curation-UI compatibility alias for DatasetsWebService.recomputeDatasetGeeqViaPost(DatasetArg, DatasetsWebService.GeeqRecomputeRequest): UI calls POST /datasets/{id}/geeq/recalculate with the same body shape.

Methods in ubic.gemma.rest with parameters of type GeeqValueObject

Modifier and Type	Method	Description
void	PipelineStatusValueObject.setGeeq(GeeqValueObject geeq)