GeeqService (Gemma 1.31.4 API)

All Superinterfaces:

BaseReadOnlyService<Geeq>, BaseVoEnabledService<Geeq,GeeqValueObject>

All Known Implementing Classes:

GeeqServiceImpl
```
public interface GeeqService
extends BaseVoEnabledService<Geeq,GeeqValueObject>
```

Nested Class Summary

Nested Classes
Modifier and Type Interface Description

static class GeeqService.ScoreMode
Modes for filling GEEQ scores.

Method Summary

All Methods Instance Methods Abstract Methods
Modifier and Type	Method	Description
`Geeq`	`calculateScore(ExpressionExperiment ee, GeeqService.ScoreMode mode)`	Calculates the GEEQ score in the given mode for the experiment with the given id.

Methods inherited from interface ubic.gemma.persistence.service.BaseReadOnlyService
countAll, find, findOrFail, getElementClass, load, load, loadAll, loadOrFail, loadOrFail, loadOrFail, loadOrFail

Methods inherited from interface ubic.gemma.persistence.service.BaseVoEnabledService
loadAllValueObjects, loadValueObject, loadValueObjectById, loadValueObjects, loadValueObjectsByIds

- Method Detail
  - calculateScore
```
Geeq calculateScore(ExpressionExperiment ee,
                    GeeqService.ScoreMode mode)
```
    Calculates the GEEQ score in the given mode for the experiment with the given id.
    
    Parameters:
    
    ee - the id of the experiment to calculate the scores for.
    
    mode - either run all scores, or only re-score batch effect, batch confound or replicates.