Package ubic.gemma.rest

Class PipelineStatusValueObject

java.lang.Object
ubic.gemma.rest.PipelineStatusValueObject
public class PipelineStatusValueObject extends Object
Snapshot of every preprocessing/analysis pipeline step for a single experiment.

Returned by GET /datasets/{dataset}/pipeline-status. The duplicated curation/permissions/quality fields (troubled, curationNote, isPublic, geeq) are included as a convenience so that callers driving a pre-public checklist can render everything from a single round trip.

  • Constructor Details

    • PipelineStatusValueObject

      public PipelineStatusValueObject()

  • Method Details

    • getIsPublic

      public boolean getIsPublic()

    • setIsPublic

      public void setIsPublic(boolean isPublic)

    • getExperimentId

      public Long getExperimentId()

    • getSteps

      public List<PipelineStatusValueObject.PipelineStepValueObject> getSteps()

    • isHasBatchInformation

      public boolean isHasBatchInformation()

    • isHasDifferentialExpressionAnalysis

      public boolean isHasDifferentialExpressionAnalysis()

    • isHasCoexpressionAnalysis

      public boolean isHasCoexpressionAnalysis()

    • isTroubled

      public boolean isTroubled()

    • getTroubleDetails

      public String getTroubleDetails()

    • isNeedsAttention

      public boolean isNeedsAttention()

    • getCurationNote

      @Nullable public String getCurationNote()
      Admin-only; remains null for non-administrators.

    • getGeeq

      @Nullable public GeeqValueObject getGeeq()

    • setExperimentId

      public void setExperimentId(Long experimentId)

    • setSteps

      public void setSteps(List<PipelineStatusValueObject.PipelineStepValueObject> steps)

    • setHasBatchInformation

      public void setHasBatchInformation(boolean hasBatchInformation)

    • setHasDifferentialExpressionAnalysis

      public void setHasDifferentialExpressionAnalysis(boolean hasDifferentialExpressionAnalysis)

    • setHasCoexpressionAnalysis

      public void setHasCoexpressionAnalysis(boolean hasCoexpressionAnalysis)

    • setTroubled

      public void setTroubled(boolean troubled)

    • setTroubleDetails

      public void setTroubleDetails(String troubleDetails)

    • setNeedsAttention

      public void setNeedsAttention(boolean needsAttention)

    • setCurationNote

      public void setCurationNote(@Nullable String curationNote)
      Admin-only; remains null for non-administrators.

    • setGeeq

      public void setGeeq(@Nullable GeeqValueObject geeq)