Package ubic.gemma.persistence.service.expression.experiment

Interface ExperimentalDesignDao

All Superinterfaces:

BaseDao<ExperimentalDesign>

All Known Implementing Classes:

ExperimentalDesignDaoImpl

public interface ExperimentalDesignDao
extends BaseDao<ExperimentalDesign>

See Also:

• ExperimentalDesign

Method Summary

Modifier and Type	Method	Description
ExpressionExperiment	getExpressionExperiment(ExperimentalDesign experimentalDesign)
ExpressionExperiment	getExpressionExperimentById(Long experimentalDesignId)
ExperimentalDesign	getRandomExperimentalDesignThatNeedsAttention(ExperimentalDesign excludedDesign)	Pick a random experimental design that needs attention.
ExperimentalDesign	loadWithExperimentalFactors(Long id)

Methods inherited from interface ubic.gemma.persistence.service.BaseDao

countAll, create, create, find, findOrCreate, getElementClass, getIdentifierPropertyName, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, update, update

Method Details

loadWithExperimentalFactors

ExperimentalDesign loadWithExperimentalFactors(Long id)

getExpressionExperiment

@Nullable
ExpressionExperiment getExpressionExperiment(ExperimentalDesign experimentalDesign)

getExpressionExperimentById

@Nullable
ExpressionExperiment getExpressionExperimentById(Long experimentalDesignId)

getRandomExperimentalDesignThatNeedsAttention

@Nullable
ExperimentalDesign getRandomExperimentalDesignThatNeedsAttention(ExperimentalDesign excludedDesign)

Pick a random experimental design that needs attention.

Parameters:

excludedDesign - an excluded design from sampling

Returns:

a random experimental design that needs attention or null if none are found